Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p33190 Brassica napus
A06p10250 Brassica napus
A06p43390 Brassica napus
A09p24050 Brassica napus
Aa31LG1G780 Aethionema arabicum
Aa31LG2G7400 Aethionema arabicum
Actinidia19874 Actinidia chinensis
Actinidia37635 Actinidia chinensis
Ah.02g113400 Amaranthus hybridus
Ah.02g129730 Amaranthus hybridus
Ah.03g135150 Amaranthus hybridus
AL1G26160 Arabidopsis lyrata
AL5G12550 Arabidopsis lyrata
Aqoxy3G00669 Aquilegia oxysepala
Aqoxy3G03363 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.63G1Z6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YTB47M Arachis hypogaea
AT1G14280 Arabidopsis thaliana
AT2G02950 Arabidopsis thaliana
ATR0564G399 Amborella trichopoda
Atru.chr11.1798 Acer truncatum
Atru.chr11.1799 Acer truncatum
Atru.chr9.2262 Acer truncatum
AUR62005769 Chenopodium quinoa
AUR62008391 Chenopodium quinoa
AUR62021705 Chenopodium quinoa
AUR62028788 Chenopodium quinoa
BcaB07g30316 Brassica carinata
BcaB07g30689 Brassica carinata
BcaC03g17177 Brassica carinata
BcaC04g21510 Brassica carinata
BcaC05g25321 Brassica carinata
BcaC06g31210 Brassica carinata
BcaC06g34030 Brassica carinata
BcaC07g38730 Brassica carinata
BcaNung06706 Brassica carinata
BolC2t11192H Brassica oleracea
BolC5t29958H Brassica oleracea
BolC7t43867H Brassica oleracea
BolC8t49285H Brassica oleracea
BolC8t49583H Brassica oleracea
BolC9t55953H Brassica oleracea
BraA02t08342Z Brassica rapa
BraA06t24208Z Brassica rapa
BraA06t27225Z Brassica rapa
BraA09t38005Z Brassica rapa
C02p51000 Brassica napus
C05p12030 Brassica napus
C07p33580 Brassica napus
C08p16570 Brassica napus
C09p30930 Brassica napus
CAN.G12.15 Capsicum annuum
CAN.G58.27 Capsicum annuum
CAN.G628.23 Capsicum annuum
CAN.G837.8 Capsicum annuum
CANSAT64G2692 Cannabis sativa
CANSAT80G0181 Cannabis sativa
CARHR014700 Cardamine hirsuta
CARHR145350 Cardamine hirsuta
Carub.0001s1396 Capsella rubella
Carub.0005s0181 Capsella rubella
Ca_04788_v3 Cicer arietinum L.
Ca_24217_v3 Cicer arietinum L.
Cc11_g13080 Coffea canephora
Cfa008990 Carpinus fangiana
Cfa018955 Carpinus fangiana
Ciclev10020017m.g Citrus clementina
Ciclev10031315m.g Citrus clementina
CiPaw.05G136200 Carya illinoinensis
CiPaw.06G084100 Carya illinoinensis
CiPaw.11G043200 Carya illinoinensis
CiPaw.12G013900 Carya illinoinensis
ClCG04G012340 Citrullus lanatus
ClCG05G024340 Citrullus lanatus
ClCG11G009990 Citrullus lanatus
COL.COLO4_23006 Corchorus olitorius
COL.COLO4_24533 Corchorus olitorius
Cpa.g.sc111.2 Carica papaya
Cpa.g.sc128.17 Carica papaya
CsaV3_1G005380 Cucumis sativus L.
CsaV3_2G010730 Cucumis sativus L.
CsaV3_5G032620 Cucumis sativus L.
CSS0006941 Camellia sinensis var. sinensis
CSS0017824 Camellia sinensis var. sinensis
CSS0036856 Camellia sinensis var. sinensis
CSS0037456 Camellia sinensis var. sinensis
CSS0046015 Camellia sinensis var. sinensis
DCAR_016544 Daucus carota
DCAR_024160 Daucus carota
Dinv16639 Davidia involucrata
Dinv24550 Davidia involucrata
Dinv34160 Davidia involucrata
Dinv38698 Davidia involucrata
Duzib084G1162 Durio zibethinus
Duzib205G1664 Durio zibethinus
Duzib251G0139 Durio zibethinus
Duzib268G0299 Durio zibethinus
ECA233G3156 Erigeron canadensis
ECA233G4149 Erigeron canadensis
Eucgr.B00480 Eucalyptus grandis
Eucgr.G02509 Eucalyptus grandis
FAN04G1767 Fragaria x ananassa
FAN07G1505 Fragaria x ananassa
FAN08G1738 Fragaria x ananassa
FAN13G3070 Fragaria x ananassa
FAN17G2513 Fragaria x ananassa
FAN18G2581 Fragaria x ananassa
FAN22G0634 Fragaria x ananassa
FvH4_4g31450 Fragaria vesca
FvH4_5g15090 Fragaria vesca
Glyma.01G046600 Glycine max
Glyma.02G106800 Glycine max
Glyma.08G300500 Glycine max
Glyma.18G120000 Glycine max
Gohir.A03G066300 Gossypium hirsutum
Gohir.A03G098250 Gossypium hirsutum
Gohir.A07G063650 Gossypium hirsutum
Gohir.A12G105550 Gossypium hirsutum
Gohir.A12G176900 Gossypium hirsutum
Gohir.A13G074101 Gossypium hirsutum
Gohir.D02G125400 Gossypium hirsutum
Gohir.D03G092800 Gossypium hirsutum
Gohir.D07G068400 Gossypium hirsutum
Gohir.D12G179400 Gossypium hirsutum
Gohir.D13G074166 Gossypium hirsutum
Gorai.001G071900 Gossypium raimondii
Gorai.003G096700 Gossypium raimondii
Gorai.005G141100 Gossypium raimondii
Gorai.008G192500 Gossypium raimondii
Gorai.013G084800 Gossypium raimondii
GSVIVG01008021001 Vitis vinifera
GSVIVG01019998001 Vitis vinifera
HanXRQChr08g0210511 Helianthus annuus
HanXRQChr08g0210521 Helianthus annuus
HanXRQChr08g0210531 Helianthus annuus
HanXRQChr12g0362581 Helianthus annuus
HanXRQChr12g0362591 Helianthus annuus
HanXRQChr12g0380721 Helianthus annuus
Haze_07337 Corylus avellana
Hma1.2p1_0265F.1_g106720 Hydrangea macrophylla
Hma1.2p1_0795F.1_g218740 Hydrangea macrophylla
Lalb_Chr05g0220401 Lupinus albus
Lalb_Chr09g0329321 Lupinus albus
Lalb_Chr10g0098231 Lupinus albus
Lalb_Chr17g0340621 Lupinus albus
Lj2g0004439 Lotus japonicus
Lsat_1_v5_gn_4_108360 Lactuca sativa
Lsat_1_v5_gn_4_9921 Lactuca sativa
Lsat_1_v5_gn_8_53121 Lactuca sativa
Lsat_1_v5_gn_8_53241 Lactuca sativa
Manes.01G186300 Manihot esculenta
Manes.05G100700 Manihot esculenta
Manes.06G093600 Manihot esculenta
Manes.10G056666 Manihot esculenta
Manes.14G077400 Manihot esculenta
MBI02_g39064_MAGBIO Magnolia biondii
MBI05_g08278_MAGBIO Magnolia biondii
MD06G1192200 Malus domestica
MD14G1198800 Malus domestica
MD16G1073600 Malus domestica
Medtr5g040340 Medicago truncatula
Medtr8g055860 Medicago truncatula
MELO3C008539.2 Cucumis melo
MELO3C012089.2 Cucumis melo
Migut.D01825 Erythranthe guttata
Migut.L01302 Erythranthe guttata
MSTRG.23024 Avicennia marina
MSTRG.7806 Avicennia marina
Nitab4.5_0000269g0010 Nicotiana tabacum
Nitab4.5_0000703g0220 Nicotiana tabacum
Nitab4.5_0000842g0040 Nicotiana tabacum
Nitab4.5_0002352g0050 Nicotiana tabacum
Nitab4.5_0007501g0020 Nicotiana tabacum
Nitab4.5_0012137g0010 Nicotiana tabacum
Nn3g17221 Nelumbo nucifera
Nn4g23142 Nelumbo nucifera
Oeu006506.1 Olea europaea
Oeu010873.1 Olea europaea
Oeu022206.1 Olea europaea
Oeu033362.1 Olea europaea
Oeu054883.1 Olea europaea
Oeu054885.1 Olea europaea
Peaxi162Scf00013g00213 Petunia axillaris
Peaxi162Scf00036g00182 Petunia axillaris
Peaxi162Scf00134g01712 Petunia axillaris
Peaxi162Scf00134g01713 Petunia axillaris
Peaxi162Scf00134g01717 Petunia axillaris
Peaxi162Scf00274g00075 Petunia axillaris
Peaxi162Scf00541g00022 Petunia axillaris
Peaxi162Scf00823g00217 Petunia axillaris
Peaxi162Scf01068g00316 Petunia axillaris
PGR044G2349 Punica granatum
PGR119G1217 Punica granatum
PGR142G0432 Punica granatum
PGSC0003DMG400031263 Solanum tuberosum
PGSC0003DMG400033102 Solanum tuberosum
Phvul.002G086000 Phaseolus vulgaris
Phvul.003G049800 Phaseolus vulgaris
Potri.015G062600 Populus trichocarpa
Prupe.1G273300 Prunus persica
Prupe.5G191900 Prunus persica
Psat2g120280 Pisum sativum
Psat4g131840 Pisum sativum
Psat4g134160 Pisum sativum
Psat4g139400 Pisum sativum
PSO017G0875 Papaver somniferum
PSO339G6607 Papaver somniferum
PSO801G0551 Papaver somniferum
QL03p062934 Quercus lobata
QL03p064352 Quercus lobata
QL10p016685 Quercus lobata
RcHm_v2.0_Chr4g0439931 Rosa chinensis
RcHm_v2.0_Chr7g0181121 Rosa chinensis
Rhsim08G0155700 Rhododendron simsii
Rhsim08G0156100 Rhododendron simsii
Rhsim12G0063400 Rhododendron simsii
Sabra15G0087900 Salix brachista
SalBow2G3214 Salvia bowleyana
SalBow7G4240 Salvia bowleyana
Sc04g0008190 Simmondsia chinensis
Sc04g0008200 Simmondsia chinensis
Sc12g0006310 Simmondsia chinensis
Sed0002318 Sechium edule
Sed0007158 Sechium edule
Sed0007876 Sechium edule
Sed0008815 Sechium edule
Sed0011365 Sechium edule
SGA_v2.0_scaffold7G04069 Striga asiatica
Solyc03g116160.1 Solanum lycopersicum
Solyc05g007480.1 Solanum lycopersicum
Solyc06g069880.1 Solanum lycopersicum
Sopen03g035130 Solanum pennellii
Sopen05g003360 Solanum pennellii
Sopen06g027150 Solanum pennellii
Sp1g12630 Schrenkiella parvula
Sp2g13980 Schrenkiella parvula
TAR371G1053 Trochodendron aralioides
TAR622G0471 Trochodendron aralioides
TAR622G1009 Trochodendron aralioides
TAR629G0269 Trochodendron aralioides
THA.LOC104801849 Tarenaya hassleriana
THA.LOC104805156 Tarenaya hassleriana
THA.LOC104812550 Tarenaya hassleriana
THA.LOC104824664 Tarenaya hassleriana
Thecc.02G347200 Theobroma cacao
Thecc.03G084900 Theobroma cacao
Thhalv10004196m.g Eutrema salsugineum
Thhalv10009661m.g Eutrema salsugineum
TPR.G37132 Trifolium pratense
TWI15G0870 Tripterygium wilfordii
TWI18G0518 Tripterygium wilfordii
TWI60G0873 Tripterygium wilfordii
unitig_22.g6521 Utricularia gibba
unitig_26.g10303 Utricularia gibba
unitig_60.g25416 Utricularia gibba
unitig_748.g7098 Utricularia gibba
vmacro01254 Vaccinium macrocarpon
VMungo0251G1966 Vigna mungo
VMungo1215G1652 Vigna mungo

User provided reference genes

Program Settings