Gene: AT2G02950
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT2G02950
- Transcript Identifier AT2G02950.1
- Gene Type Coding gene
- Location Chr2 : 855149-856468 : negative
Gene Family Information
- ID HOM05D002654
- #Genes/#Species 259/83
- Phylogenetic origin
- ID ORTHO05D002430
- #Genes/#Species 288/83
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT2G02950.1
- symbol PKS1
- uniprot Q9SWI1
Descriptions
- Description phytochrome kinase substrate 1
- Computational description phytochrome kinase substrate 1 (PKS1); BEST Arabidopsis thaliana protein match is: phytochrome kinase substrate 2 (TAIR:AT1G14280.1); Has 564 Blast hits to 331 proteins in 102 species: Archae - 0; Bacteria - 114; Metazoa - 82; Fungi - 26; Plants - 127; Viruses - 0; Other Eukaryotes - 215 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009585 | IEA | GOA Database | red, far-red light phototransduction | |
| GO:0009585 | IMP | Gene Ontology | red, far-red light phototransduction | 1 |
| GO:0009638 | IEA | GOA Database | phototropism | |
| GO:0009638 | IGI | Gene Ontology | phototropism | 2 |
| GO:0009638 | IEA | InterPro | phototropism | |
| GO:0010017 | IEA | GOA Database | red or far-red light signaling pathway | |
| GO:0010017 | IMP | Gene Ontology | red or far-red light signaling pathway | 3 |
| GO:0010114 | IEP | Gene Ontology | response to red light | 4 |
| GO:0010218 | IEP | Gene Ontology | response to far red light | 4 |
| GO:0009958 | IMP | Gene Ontology | positive gravitropism | 5 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | IPI | Gene Ontology | protein binding | 1 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISM | Gene Ontology | nucleus | |
| GO:0005737 | NAS | Gene Ontology | cytoplasm | 1 |
| GO:0005886 | IEA | GOA Database | plasma membrane | |
| GO:0005886 | IDA | Gene Ontology | plasma membrane | 2 |
| GO:0016020 | IEA | GOA Database | membrane |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 26.1.2.2.3 | External stimuli response.light.UV-A/blue light.phototropin-mediated photoperception.phototropin signalling factor (PKS) |