Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p18520 Brassica napus
A09p49100 Brassica napus
Aa31LG10G11030 Aethionema arabicum
Aa31LG5G10160 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.3145 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.4718 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.2815 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.1470 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.1199 Anthoceros agrestis
Actinidia17483 Actinidia chinensis
Actinidia32694 Actinidia chinensis
Actinidia35288 Actinidia chinensis
Actinidia38161 Actinidia chinensis
Ah.04g165320 Amaranthus hybridus
Ah.04g165330 Amaranthus hybridus
Ah.09g227010 Amaranthus hybridus
Ah.09g227020 Amaranthus hybridus
AL5G37440 Arabidopsis lyrata
AL7G25470 Arabidopsis lyrata
Aqoxy1G02599 Aquilegia oxysepala
Aqoxy1G03945 Aquilegia oxysepala
Aqoxy4G02394 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0DQ71P Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.4YWE6A Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.7815EC Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.79CRDV Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.I2I2ZX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KKF5XK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KP6B7T Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LVY3P8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QVF5JZ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XS9HJ1 Arachis hypogaea
AT3G56120 Arabidopsis thaliana
AT4G27340 Arabidopsis thaliana
ATR0605G072 Amborella trichopoda
ATR1132G118 Amborella trichopoda
Atru.chr2.2940 Acer truncatum
AUR62011030 Chenopodium quinoa
AUR62029292 Chenopodium quinoa
AUR62033403 Chenopodium quinoa
AUR62041166 Chenopodium quinoa
BcaB01g00029 Brassica carinata
BcaC07g39927 Brassica carinata
BcaC09g50582 Brassica carinata
BcaC09g50583 Brassica carinata
BcaNung03038 Brassica carinata
BcaNung05199 Brassica carinata
BolC1t02293H Brassica oleracea
BolC4t25154H Brassica oleracea
BolC8t50763H Brassica oleracea
BraA01t01801Z Brassica rapa
BraA09t40362Z Brassica rapa
C01p23470 Brassica napus
C04p36410 Brassica napus
C08p31420 Brassica napus
CAN.G1181.9 Capsicum annuum
CAN.G444.6 Capsicum annuum
CANSAT11G0569 Cannabis sativa
CANSAT56G1449 Cannabis sativa
CARHR166270 Cardamine hirsuta
CARHR234990 Cardamine hirsuta
Carub.0005s2287 Capsella rubella
Carub.0007s1354 Capsella rubella
Ca_01793_v3 Cicer arietinum L.
Ca_01794_v3 Cicer arietinum L.
Ca_02541_v3 Cicer arietinum L.
CBR_g154 Chara braunii
CBR_g34149 Chara braunii
Cc05_g12810 Coffea canephora
Cc10_g11950 Coffea canephora
CDE02G1138 Ceratophyllum demersum
CDE05G1108 Ceratophyllum demersum
Cfa020488 Carpinus fangiana
Cfa024400 Carpinus fangiana
Ciclev10007807m.g Citrus clementina
Ciclev10008679m.g Citrus clementina
CiPaw.03G235200 Carya illinoinensis
CiPaw.11G178700 Carya illinoinensis
ClCG11G002640 Citrullus lanatus
ClCG11G018590 Citrullus lanatus
COL.COLO4_09499 Corchorus olitorius
COL.COLO4_23641 Corchorus olitorius
COL.COLO4_32948 Corchorus olitorius
COL.COLO4_34935 Corchorus olitorius
Cpa.g.sc12.18 Carica papaya
Cpa.g.sc23.142 Carica papaya
Cpa.g.sc23.143 Carica papaya
Cre16.g672041 Chlamydomonas reinhardtii
CsaV3_2G002470 Cucumis sativus L.
CsaV3_3G044270 Cucumis sativus L.
CSS0017270 Camellia sinensis var. sinensis
CSS0035000 Camellia sinensis var. sinensis
CSS0036442 Camellia sinensis var. sinensis
CSS0041277 Camellia sinensis var. sinensis
CSS0041753 Camellia sinensis var. sinensis
CSS0047341 Camellia sinensis var. sinensis
DCAR_009991 Daucus carota
DCAR_016972 Daucus carota
Dinv08360 Davidia involucrata
Duzib168G1197 Durio zibethinus
Duzib187G1530 Durio zibethinus
Duzib268G0598 Durio zibethinus
ECA236G1774 Erigeron canadensis
EL10Ac4g08040 Beta vulgaris
EL10Ac4g09270 Beta vulgaris
EL10Ac8g18544 Beta vulgaris
Eucgr.C01077 Eucalyptus grandis
Eucgr.F03364 Eucalyptus grandis
Eucgr.L01527 Eucalyptus grandis
FAN11G1488 Fragaria x ananassa
FAN16G1115 Fragaria x ananassa
FAN19G1865 Fragaria x ananassa
FAN21G1241 Fragaria x ananassa
FAN25G2965 Fragaria x ananassa
FAN26G0906 Fragaria x ananassa
FAN26G3367 Fragaria x ananassa
FvH4_1g05380 Fragaria vesca
FvH4_3g21210 Fragaria vesca
Glyma.05G012700 Glycine max
Glyma.12G217900 Glycine max
Glyma.13G282700 Glycine max
Glyma.17G120833 Glycine max
Gohir.A01G069800 Gossypium hirsutum
Gohir.D01G057000 Gossypium hirsutum
Gohir.D06G058900 Gossypium hirsutum
Gorai.002G077400 Gossypium raimondii
GSVIVG01014467001 Vitis vinifera
HanXRQChr10g0317371 Helianthus annuus
HanXRQChr11g0331971 Helianthus annuus
HanXRQChr12g0355841 Helianthus annuus
Haze_09552 Corylus avellana
Haze_25681 Corylus avellana
Hma1.2p1_0024F.1_g015930 Hydrangea macrophylla
Hma1.2p1_0024F.1_g015940 Hydrangea macrophylla
Hma1.2p1_1968F.1_g309470 Hydrangea macrophylla
Hma1.2p1_1968F.1_g309480 Hydrangea macrophylla
Hma1.2p1_2024F.1_g311430 Hydrangea macrophylla
HPP92_010114 Vanilla planifolia
HPP92_026033 Vanilla planifolia
Hund14754 Selenicereus undatus
Hund14755 Selenicereus undatus
Hund14757 Selenicereus undatus
Hund26118 Selenicereus undatus
Lalb_Chr01g0017111 Lupinus albus
Lalb_Chr08g0235011 Lupinus albus
Lalb_Chr21g0316611 Lupinus albus
Lj3g0014478 Lotus japonicus
Lj4g0022349 Lotus japonicus
Lj7A641G78 Lonicera japonica
Lj7A641G79 Lonicera japonica
Lj8C162T8 Lonicera japonica
Lsat_1_v5_gn_4_49080 Lactuca sativa
Lsat_1_v5_gn_5_99861 Lactuca sativa
Lsat_1_v5_gn_7_105861 Lactuca sativa
Manes.03G068300 Manihot esculenta
Manes.15G081500 Manihot esculenta
Manes.16G065000 Manihot esculenta
Mapoly0022s0148 Marchantia polymorpha
Mapoly0023s0079 Marchantia polymorpha
MBI01_g20396_MAGBIO Magnolia biondii
MBI02_g25136_MAGBIO Magnolia biondii
MBI02_g38751_MAGBIO Magnolia biondii
MBI02_g46150_MAGBIO Magnolia biondii
MCO08G012 Micromonas commoda
MCO10G234 Micromonas commoda
MD02G1062400 Malus domestica
MD03G1217000 Malus domestica
MD11G1234700 Malus domestica
Medtr2g081225 Medicago truncatula
Medtr2g081230 Medicago truncatula
Medtr4g112015 Medicago truncatula
MELO3C004542.2 Cucumis melo
MELO3C018180.2 Cucumis melo
Migut.D02058 Erythranthe guttata
Migut.L00848 Erythranthe guttata
Migut.M01848 Erythranthe guttata
MSTRG.6857 Avicennia marina
Nitab4.5_0000005g0480 Nicotiana tabacum
Nitab4.5_0000066g0020 Nicotiana tabacum
Nitab4.5_0000092g0280 Nicotiana tabacum
Nitab4.5_0001386g0040 Nicotiana tabacum
Nn1g06830 Nelumbo nucifera
Nn7g36037 Nelumbo nucifera
Oeu006771.1 Olea europaea
Oeu019380.3 Olea europaea
Os01g0390400 Oryza sativa ssp. japonica
Os02g0606300 Oryza sativa ssp. japonica
Peaxi162Scf00000g00783 Petunia axillaris
Peaxi162Scf00560g00619 Petunia axillaris
PGR031G2032 Punica granatum
PGR142G2078 Punica granatum
PGSC0003DMG400021815 Solanum tuberosum
PGSC0003DMG401015580 Solanum tuberosum
PGSC0003DMG402015580 Solanum tuberosum
Phvul.003G176601 Phaseolus vulgaris
Phvul.005G087700 Phaseolus vulgaris
Potri.001G408950 Populus trichocarpa
Potri.011G125700 Populus trichocarpa
Potri.018G072200 Populus trichocarpa
Pp3c16_12900 Physcomitrium patens
Pp3c17_17170 Physcomitrium patens
PRCOL_00004046 Prasinoderma coloniale
PRCOL_00005313 Prasinoderma coloniale
Prupe.4G192400 Prunus persica
Psat4g043160 Pisum sativum
Psat4g050320 Pisum sativum
Psat4g050360 Pisum sativum
Psat5g247040 Pisum sativum
PSO170G5904 Papaver somniferum
PSO210G4513 Papaver somniferum
PSO832G1285 Papaver somniferum
QL02p086119 Quercus lobata
QL08p017150 Quercus lobata
RcHm_v2.0_Chr2g0091071 Rosa chinensis
RcHm_v2.0_Chr5g0036281 Rosa chinensis
Rhsim03G0244900 Rhododendron simsii
RhsimUnG0172700 Rhododendron simsii
RhsimUnG0257200 Rhododendron simsii
Sabra11G0111800 Salix brachista
Sabra18G0064400 Salix brachista
SalBow1G1951 Salvia bowleyana
SalBow7G1800 Salvia bowleyana
Sc07g0002680 Simmondsia chinensis
Sc18g0001020 Simmondsia chinensis
Sed0008369 Sechium edule
Sed0019430 Sechium edule
SEGI_12373 Sequoiadendron giganteum
SEGI_20865 Sequoiadendron giganteum
SEGI_24830 Sequoiadendron giganteum
SEGI_33629 Sequoiadendron giganteum
SGA_v2.0_scaffold1G00550 Striga asiatica
SGA_v2.0_scaffold42G16128 Striga asiatica
SGA_v2.0_scaffold73G24325 Striga asiatica
SHI02609 Sapria himalayana
SMO141G0090 Selaginella moellendorffii
Solyc05g006200.4 Solanum lycopersicum
Solyc12g005280.3 Solanum lycopersicum
Sopen05g002210 Solanum pennellii
Sopen12g001260 Solanum pennellii
Sp5g06410 Schrenkiella parvula
Sp7g25260 Schrenkiella parvula
Sp7g25270 Schrenkiella parvula
TAR383G0369 Trochodendron aralioides
TAR626G0543 Trochodendron aralioides
TAR627G0077 Trochodendron aralioides
THA.LOC104799902 Tarenaya hassleriana
THA.LOC104811104 Tarenaya hassleriana
Thecc.07G068800 Theobroma cacao
Thecc.09G114900 Theobroma cacao
Thhalv10005971m.g Eutrema salsugineum
Thhalv10024701m.g Eutrema salsugineum
TPR.G26750 Trifolium pratense
TPR.G32856 Trifolium pratense
TWI34G1303 Tripterygium wilfordii
TWI39G0497 Tripterygium wilfordii
unitig_46.g18492 Utricularia gibba
unitig_85.g27402 Utricularia gibba
vmacro06194 Vaccinium macrocarpon
vmacro09574 Vaccinium macrocarpon
VMungo0540G1934 Vigna mungo
VMungo1080G0571 Vigna mungo
VMungo1383G2567 Vigna mungo
Zm00001eb132260 Zea mays
Zm00001eb184100 Zea mays

User provided reference genes

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