Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p00230 Brassica napus
Aa31LG10G1150 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.939 Anthoceros agrestis
Actinidia30436 Actinidia chinensis
Actinidia39346 Actinidia chinensis
AL1G63400 Arabidopsis lyrata
Aqoxy1G00475 Aquilegia oxysepala
Aqoxy1G02997 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.3G7H7K Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.P751E4 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Q36ZPG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WZQ8WP Arachis hypogaea
AT1G55350 Arabidopsis thaliana
ATR0827G153 Amborella trichopoda
Atru.chr3.2106 Acer truncatum
AUR62019163 Chenopodium quinoa
AUR62040902 Chenopodium quinoa
AUR62040903 Chenopodium quinoa
BcaB04g16962 Brassica carinata
BcaC08g43618 Brassica carinata
BcaC08g43619 Brassica carinata
BolC6t36109H Brassica oleracea
BraA06t23239Z Brassica rapa
C03p92650 Brassica napus
C03p92660 Brassica napus
C06p10330 Brassica napus
CAN.G108.57 Capsicum annuum
CAN.G12707.1 Capsicum annuum
CAN.G134.139 Capsicum annuum
CAN.G134.142 Capsicum annuum
CAN.G134.151 Capsicum annuum
CAN.G134.157 Capsicum annuum
CAN.G1353.10 Capsicum annuum
CAN.G1353.19 Capsicum annuum
CAN.G1353.22 Capsicum annuum
CAN.G1353.23 Capsicum annuum
CAN.G1353.27 Capsicum annuum
CAN.G1353.3 Capsicum annuum
CAN.G1484.12 Capsicum annuum
CAN.G1484.13 Capsicum annuum
CAN.G1563.1 Capsicum annuum
CAN.G1579.1 Capsicum annuum
CAN.G1579.14 Capsicum annuum
CAN.G1579.4 Capsicum annuum
CAN.G1579.7 Capsicum annuum
CAN.G1669.10 Capsicum annuum
CAN.G1669.5 Capsicum annuum
CAN.G1669.7 Capsicum annuum
CAN.G1669.8 Capsicum annuum
CAN.G1703.18 Capsicum annuum
CAN.G1703.3 Capsicum annuum
CAN.G1703.6 Capsicum annuum
CAN.G1751.12 Capsicum annuum
CAN.G1751.13 Capsicum annuum
CAN.G1783.2 Capsicum annuum
CAN.G1783.4 Capsicum annuum
CAN.G1783.5 Capsicum annuum
CAN.G1783.6 Capsicum annuum
CAN.G1783.7 Capsicum annuum
CAN.G1833.6 Capsicum annuum
CAN.G2026.1 Capsicum annuum
CAN.G2026.4 Capsicum annuum
CAN.G2091.1 Capsicum annuum
CAN.G2101.1 Capsicum annuum
CAN.G2119.1 Capsicum annuum
CAN.G2119.2 Capsicum annuum
CAN.G2119.3 Capsicum annuum
CAN.G2177.2 Capsicum annuum
CAN.G225.19 Capsicum annuum
CAN.G2314.3 Capsicum annuum
CAN.G2376.2 Capsicum annuum
CAN.G2802.1 Capsicum annuum
CAN.G309.100 Capsicum annuum
CAN.G309.101 Capsicum annuum
CAN.G309.103 Capsicum annuum
CAN.G309.107 Capsicum annuum
CAN.G309.110 Capsicum annuum
CAN.G309.113 Capsicum annuum
CAN.G309.114 Capsicum annuum
CAN.G309.121 Capsicum annuum
CAN.G309.123 Capsicum annuum
CAN.G309.124 Capsicum annuum
CAN.G309.125 Capsicum annuum
CAN.G309.126 Capsicum annuum
CAN.G309.128 Capsicum annuum
CAN.G309.130 Capsicum annuum
CAN.G309.132 Capsicum annuum
CAN.G309.134 Capsicum annuum
CAN.G309.135 Capsicum annuum
CAN.G309.143 Capsicum annuum
CAN.G309.144 Capsicum annuum
CAN.G309.146 Capsicum annuum
CAN.G309.148 Capsicum annuum
CAN.G309.99 Capsicum annuum
CAN.G337.40 Capsicum annuum
CAN.G4338.1 Capsicum annuum
CAN.G486.3 Capsicum annuum
CAN.G551.4 Capsicum annuum
CAN.G567.118 Capsicum annuum
CAN.G5700.1 Capsicum annuum
CAN.G575.1 Capsicum annuum
CAN.G575.112 Capsicum annuum
CAN.G575.132 Capsicum annuum
CAN.G7166.1 Capsicum annuum
CAN.G743.3 Capsicum annuum
CAN.G792.4 Capsicum annuum
CAN.G8.32 Capsicum annuum
CAN.G8162.1 Capsicum annuum
CANSAT11G2110 Cannabis sativa
CARHR045010 Cardamine hirsuta
Carub.0001s4386 Capsella rubella
Ca_17842_v3 Cicer arietinum L.
Ca_17843_v3 Cicer arietinum L.
CBR_g23251 Chara braunii
CBR_g23253 Chara braunii
CBR_g23680 Chara braunii
CBR_g23682 Chara braunii
CBR_g23684 Chara braunii
CBR_g23686 Chara braunii
CBR_g37133 Chara braunii
CBR_g38072 Chara braunii
CBR_g39746 Chara braunii
Cc01_g00070 Coffea canephora
CDE02G0627 Ceratophyllum demersum
CDE02G1358 Ceratophyllum demersum
Cfa009562 Carpinus fangiana
Ciclev10014012m.g Citrus clementina
CiPaw.13G177100 Carya illinoinensis
CiPaw.13G177200 Carya illinoinensis
CiPaw.14G136900 Carya illinoinensis
CiPaw.14G137000 Carya illinoinensis
ClCG03G014540 Citrullus lanatus
COL.COLO4_05794 Corchorus olitorius
Cpa.g.sc119.40 Carica papaya
Cre02.g112250 Chlamydomonas reinhardtii
Cre02.g112300 Chlamydomonas reinhardtii
Cre05.g241202 Chlamydomonas reinhardtii
Cre10.g448850 Chlamydomonas reinhardtii
Cre17.g728300 Chlamydomonas reinhardtii
CsaV3_1G041650 Cucumis sativus L.
CSS0046180 Camellia sinensis var. sinensis
DCAR_029934 Daucus carota
Dinv11477 Davidia involucrata
Dinv11478 Davidia involucrata
Dinv13473 Davidia involucrata
Duzib168G0200 Durio zibethinus
ECA233G0145 Erigeron canadensis
EL10Ac4g10386 Beta vulgaris
Eucgr.J01766 Eucalyptus grandis
FAN04G0011 Fragaria x ananassa
FAN04G0904 Fragaria x ananassa
FAN11G1617 Fragaria x ananassa
FAN11G2291 Fragaria x ananassa
FAN11G3266 Fragaria x ananassa
FAN11G3798 Fragaria x ananassa
FAN16G0954 Fragaria x ananassa
FAN21G2381 Fragaria x ananassa
FAN25G0679 Fragaria x ananassa
FAN25G1480 Fragaria x ananassa
FvH4_3g45640 Fragaria vesca
FvH4_3g45670 Fragaria vesca
FvH4_3g45710 Fragaria vesca
FvH4_3g45741 Fragaria vesca
Glyma.05G167200 Glycine max
Glyma.08G125500 Glycine max
Gohir.A03G022300 Gossypium hirsutum
Gohir.D03G146400 Gossypium hirsutum
Gohir.D04G087900 Gossypium hirsutum
Gorai.003G153800 Gossypium raimondii
Gorai.012G098100 Gossypium raimondii
GSVIVG01025470001 Vitis vinifera
HanXRQChr02g0057261 Helianthus annuus
HanXRQChr13g0405751 Helianthus annuus
Haze_22941 Corylus avellana
Hma1.2p1_0241F.1_g100580 Hydrangea macrophylla
HPP92_024697 Vanilla planifolia
HPP92_024698 Vanilla planifolia
HPP92_024699 Vanilla planifolia
Hund21627 Selenicereus undatus
Lalb_Chr13g0295581 Lupinus albus
Lj2A763G36 Lonicera japonica
Lj2A763T47 Lonicera japonica
Lj2A763T48 Lonicera japonica
Lj4g0028195 Lotus japonicus
Lsat_1_v5_gn_2_54100 Lactuca sativa
Lsat_1_v5_gn_6_53141 Lactuca sativa
Lsat_1_v5_gn_7_65640 Lactuca sativa
Lsat_1_v5_gn_8_87720 Lactuca sativa
Manes.03G087600 Manihot esculenta
Manes.15G109101 Manihot esculenta
Mapoly0026s0090 Marchantia polymorpha
Mapoly0026s0110 Marchantia polymorpha
MBI01_g25638_MAGBIO Magnolia biondii
MBI06_g12312_MAGBIO Magnolia biondii
MBI09_g22510_MAGBIO Magnolia biondii
MBI09_g27980_MAGBIO Magnolia biondii
MBI13_g43495_MAGBIO Magnolia biondii
MBI16_g03604_MAGBIO Magnolia biondii
MCO05G112 Micromonas commoda
MCO07G349 Micromonas commoda
MCO09G147 Micromonas commoda
MCO11G888 Micromonas commoda
MCO16G075 Micromonas commoda
MD03G1003600 Malus domestica
MD11G1003500 Malus domestica
MD12G1156100 Malus domestica
Medtr8g088520 Medicago truncatula
MELO3C015577.2 Cucumis melo
Migut.D02566 Erythranthe guttata
Migut.D02567 Erythranthe guttata
Migut.D02589 Erythranthe guttata
MSTRG.20937 Avicennia marina
Nitab4.5_0000827g0130 Nicotiana tabacum
Nn2g15859 Nelumbo nucifera
Nn7g35861 Nelumbo nucifera
Oeu023700.1 Olea europaea
Oeu023952.2 Olea europaea
Os02g0709400 Oryza sativa ssp. japonica
Peaxi162Scf00738g00312 Petunia axillaris
PGR119G1355 Punica granatum
PGSC0003DMG400004280 Solanum tuberosum
PGSC0003DMG400021759 Solanum tuberosum
Phvul.002G247600 Phaseolus vulgaris
Potri.001G003900 Populus trichocarpa
Potri.003G221100 Populus trichocarpa
Pp3c17_17550 Physcomitrium patens
PRCOL_00006516 Prasinoderma coloniale
Prupe.6G003300 Prunus persica
Psat0s11647g0040 Pisum sativum
Psat3g144720 Pisum sativum
Psat7g063600 Pisum sativum
Psat7g064160 Pisum sativum
Psat7g106000 Pisum sativum
PSO339G0705 Papaver somniferum
PSO384G1583 Papaver somniferum
PSO478G3224 Papaver somniferum
QL01p003675 Quercus lobata
QL03p015964 Quercus lobata
RcHm_v2.0_Chr5g0083811 Rosa chinensis
Rhsim01G0184300 Rhododendron simsii
Sabra01G0002600 Salix brachista
Sabra03G0164600 Salix brachista
SalBow2G0058 Salvia bowleyana
Sc16g0012220 Simmondsia chinensis
Sed0000966 Sechium edule
Sed0022657 Sechium edule
SEGI_17528 Sequoiadendron giganteum
SEGI_26512 Sequoiadendron giganteum
SGA_v2.0_scaffold3G01729 Striga asiatica
SHI31315 Sapria himalayana
SHI31316 Sapria himalayana
SHI31320 Sapria himalayana
SMO332G0020 Selaginella moellendorffii
SMO334G0130 Selaginella moellendorffii
Solyc12g037990.2 Solanum lycopersicum
Solyc12g100360.1 Solanum lycopersicum
Sopen12g035030 Solanum pennellii
Sp1g41030 Schrenkiella parvula
TAR369G0007 Trochodendron aralioides
TAR383G1071 Trochodendron aralioides
TAR623G0218 Trochodendron aralioides
THA.LOC104810325 Tarenaya hassleriana
THA.LOC104822681 Tarenaya hassleriana
Thecc.09G199700 Theobroma cacao
Thhalv10011175m.g Eutrema salsugineum
TPR.G6803 Trifolium pratense
TWI34G0193 Tripterygium wilfordii
unitig_899.g15353 Utricularia gibba
vmacro12599 Vaccinium macrocarpon
VMungo0251G1507 Vigna mungo
VMungo0251G2232 Vigna mungo
VMungo0251G3571 Vigna mungo
Zm00001eb014030 Zea mays

User provided reference genes

Program Settings