Gene: COL.COLO4_05794

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_05794
  • Transcript Identifier COL.rna4615
  • Gene Type Coding gene
  • Location AWUE01012460.1 : 7797-24023 : negative

Gene Family Information

  • ID HOM05D002496
  • #Genes/#Species 273/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna4615
  • GenBank OMP09116.1
  • id gene5766
  • gene_name COLO4_05794
  • uniprot A0A1R3KPV0

Descriptions

  • Description hypothetical protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0032877
ISO
PLAZA Integrative Orthologypositive regulation of DNA endoreduplication AT1G55350
GO:0090628
ISO
PLAZA Integrative Orthologyplant epidermal cell fate specification AT1G55350
GO:0001708
ISO
PLAZA Integrative Orthologycell fate specification AT1G55350
GO:2000011
ISO
PLAZA Integrative Orthologyregulation of adaxial/abaxial pattern formation Os02g0709400
GO:2000024
ISO
PLAZA Integrative Orthologyregulation of leaf development AT1G55350
GO:2000014
ISO
PLAZA Integrative Orthologyregulation of endosperm development AT1G55350
GO:0001558
ISO
PLAZA Integrative Orthologyregulation of cell growth AT1G55350
GO:0097264
ISO
PLAZA Integrative Orthologyself proteolysis AT1G55350
GO:0042127
ISO
PLAZA Integrative Orthologyregulation of cell population proliferation AT1G55350
GO:0090392
ISO
PLAZA Integrative Orthologysepal giant cell differentiation AT1G55350
GO:0009934
ISO
PLAZA Integrative Orthologyregulation of meristem structural organization AT1G55350
GO:0009960
ISO
PLAZA Integrative Orthologyendosperm development AT1G55350
GO:0009793
ISO
PLAZA Integrative Orthologyembryo development ending in seed dormancy AT1G55350
GO:0040014
ISO
PLAZA Integrative Orthologyregulation of multicellular organism growth AT1G55350
GO:0006508
IEA
GOA Databaseproteolysis
GO:0006508
IEA
InterProproteolysis

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008234
ISO
PLAZA Integrative Orthologycysteine-type peptidase activity Zm00001eb014030
GO:0004197
ISO
PLAZA Integrative Orthologycysteine-type endopeptidase activity AT1G55350
GO:0004198
IEA
GOA Databasecalcium-dependent cysteine-type endopeptidase activity
GO:0004198
IEA
InterProcalcium-dependent cysteine-type endopeptidase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT1G55350
GO:0010008
ISO
PLAZA Integrative Orthologyendosome membrane Zm00001eb014030
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT1G55350
GO:0005887
ISO
PLAZA Integrative Orthologyintegral component of plasma membrane Zm00001eb014030
GO:0005789
ISO
PLAZA Integrative Orthologyendoplasmic reticulum membrane AT1G55350
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0005783
ISO
PLAZA Integrative Orthologyendoplasmic reticulum AT1G55350
GO:0016020
IEA
GOA Databasemembrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR022684 Peptidase C2, calpain family
IPR001300 Peptidase C2, calpain, catalytic domain
IPR022682 Peptidase C2, calpain, large subunit, domain III
IPR038765 Papain-like cysteine peptidase superfamily
IPR022683 Peptidase C2, calpain, domain III
IPR013320 Concanavalin A-like lectin/glucanase domain superfamily
IPR036213 Calpain large subunit, domain III superfamily
Mapman id Description
19.4.1.2 Protein homeostasis.proteolysis.cysteine-type peptidase activities.C2-class calcium-activated protease (Phytocalpain)