Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p02180 Brassica napus
A03p36800 Brassica napus
A05p38410 Brassica napus
A10p31030 Brassica napus
Aa31LG11G5990 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.3772 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.3781 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.3782 Anthoceros agrestis
Actinidia05482 Actinidia chinensis
Actinidia38179 Actinidia chinensis
Ah.04g150770 Amaranthus hybridus
Ah.13g077170 Amaranthus hybridus
AL3G17450 Arabidopsis lyrata
AL3G22340 Arabidopsis lyrata
AL6G14970 Arabidopsis lyrata
AL6G22430 Arabidopsis lyrata
AL8G15170 Arabidopsis lyrata
Aqoxy1G00414 Aquilegia oxysepala
Aqoxy2G00506 Aquilegia oxysepala
Aqoxy4G00594 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.4137UB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.596WN8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CFFK31 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PJ7IPU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RWA00I Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SF5CY1 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TK2Q97 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XXDJ74 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Z96D72 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZA3CQ0 Arachis hypogaea
AT3G10820 Arabidopsis thaliana
AT5G05140 Arabidopsis thaliana
ATR0307G132 Amborella trichopoda
Atru.chr1.1386 Acer truncatum
Atru.chr3.2727 Acer truncatum
AUR62018377 Chenopodium quinoa
AUR62030285 Chenopodium quinoa
BcaB01g05724 Brassica carinata
BcaB01g05937 Brassica carinata
BcaB04g18612 Brassica carinata
BcaB05g21730 Brassica carinata
BcaC01g04153 Brassica carinata
BcaC03g13147 Brassica carinata
BcaC05g29428 Brassica carinata
BcaC06g32223 Brassica carinata
BcaC08g43026 Brassica carinata
BcaNung05622 Brassica carinata
BNapus_Darmor_BZH_scaffold_273p00080 Brassica napus
BolC2t06187H Brassica oleracea
BolC2t07805H Brassica oleracea
BolC3t12803H Brassica oleracea
BolC3t16719H Brassica oleracea
BolC5t32682H Brassica oleracea
BolC5t34386H Brassica oleracea
BolC6t35408H Brassica oleracea
BolC9t59917H Brassica oleracea
BraA02t04834Z Brassica rapa
BraA03t09582Z Brassica rapa
BraA03t12842Z Brassica rapa
BraA05t22632Z Brassica rapa
BraA10t45148Z Brassica rapa
C02p02180 Brassica napus
C02p17070 Brassica napus
C03p02510 Brassica napus
C03p44510 Brassica napus
C05p57310 Brassica napus
C06p02790 Brassica napus
C06p02800 Brassica napus
C08p33130 Brassica napus
C09p71560 Brassica napus
CAN.G128.85 Capsicum annuum
CAN.G243.4 Capsicum annuum
CAN.G243.5 Capsicum annuum
CAN.G960.68 Capsicum annuum
CANSAT64G2707 Cannabis sativa
CARHR085400 Cardamine hirsuta
CARHR208120 Cardamine hirsuta
Carub.0003s1006 Capsella rubella
Carub.0006s0407 Capsella rubella
Ca_08373_v3 Cicer arietinum L.
Ca_12358_v3 Cicer arietinum L.
Ca_17097_v3 Cicer arietinum L.
Cc00_g10950 Coffea canephora
CDE08G0106 Ceratophyllum demersum
CDE08G0887 Ceratophyllum demersum
Cfa019980 Carpinus fangiana
Ciclev10011717m.g Citrus clementina
CiPaw.09G049600 Carya illinoinensis
CiPaw.09G049700 Carya illinoinensis
CiPaw.10G042500 Carya illinoinensis
ClCG10G016470 Citrullus lanatus
COL.COLO4_08833 Corchorus olitorius
Cpa.g.sc92.76 Carica papaya
Cre01.g004850 Chlamydomonas reinhardtii
CsaV3_3G039870 Cucumis sativus L.
CSS0001541 Camellia sinensis var. sinensis
CSS0002579 Camellia sinensis var. sinensis
CSS0008643 Camellia sinensis var. sinensis
CSS0019053 Camellia sinensis var. sinensis
CSS0041758 Camellia sinensis var. sinensis
DCAR_009127 Daucus carota
DCAR_013651 Daucus carota
Dinv08254 Davidia involucrata
Dinv21482 Davidia involucrata
Dinv38622 Davidia involucrata
Duzib106G0075 Durio zibethinus
Duzib128G0587 Durio zibethinus
ECA234G0705 Erigeron canadensis
ECA234G0722 Erigeron canadensis
ECA234G1414 Erigeron canadensis
ECA234G1598 Erigeron canadensis
ECA234G2141 Erigeron canadensis
ECA240G4334 Erigeron canadensis
ECA246G3061 Erigeron canadensis
ECA247G1003 Erigeron canadensis
ECA248G0986 Erigeron canadensis
ECA248G1298 Erigeron canadensis
EL10Ac3g07266 Beta vulgaris
Eucgr.A02206 Eucalyptus grandis
Eucgr.K01629 Eucalyptus grandis
Eucgr.K01634 Eucalyptus grandis
Eucgr.K01635 Eucalyptus grandis
Eucgr.K01654 Eucalyptus grandis
FAN01G2439 Fragaria x ananassa
FAN02G2197 Fragaria x ananassa
FAN03G1106 Fragaria x ananassa
FAN06G0701 Fragaria x ananassa
FAN06G0974 Fragaria x ananassa
FAN09G4564 Fragaria x ananassa
FAN10G0479 Fragaria x ananassa
FAN10G3393 Fragaria x ananassa
FAN14G2978 Fragaria x ananassa
FvH4_6g37520 Fragaria vesca
Glyma.02G157800 Glycine max
Glyma.03G124700 Glycine max
Glyma.19G127800 Glycine max
Gohir.A11G306400 Gossypium hirsutum
Gohir.D11G321900 Gossypium hirsutum
Gorai.007G352000 Gossypium raimondii
GSVIVG01025776001 Vitis vinifera
HanXRQChr01g0005801 Helianthus annuus
HanXRQChr01g0007661 Helianthus annuus
HanXRQChr02g0052391 Helianthus annuus
HanXRQChr02g0052401 Helianthus annuus
HanXRQChr02g0052411 Helianthus annuus
HanXRQChr04g0100861 Helianthus annuus
HanXRQChr10g0293031 Helianthus annuus
HanXRQChr10g0298511 Helianthus annuus
HanXRQChr13g0406701 Helianthus annuus
HanXRQChr16g0522351 Helianthus annuus
HanXRQChr16g0522371 Helianthus annuus
Haze_20253 Corylus avellana
Haze_20254 Corylus avellana
Haze_20255 Corylus avellana
Hma1.2p1_0254F.1_g103210 Hydrangea macrophylla
HPP92_006789 Vanilla planifolia
Hund19081 Selenicereus undatus
Lalb_Chr02g0156621 Lupinus albus
Lalb_Chr14g0365651 Lupinus albus
Lalb_Chr22g0357761 Lupinus albus
Lalb_Chr24g0400441 Lupinus albus
Lj1g0014460 Lotus japonicus
Lj2C403T6 Lonicera japonica
Lsat_1_v5_gn_5_59960 Lactuca sativa
Lsat_1_v5_gn_7_59120 Lactuca sativa
Lsat_1_v5_gn_7_61900 Lactuca sativa
Lsat_1_v5_gn_8_117400 Lactuca sativa
Lsat_1_v5_gn_9_32260 Lactuca sativa
Manes.08G061400 Manihot esculenta
Manes.09G002800 Manihot esculenta
Mapoly0002s0340 Marchantia polymorpha
MBI13_g36916_MAGBIO Magnolia biondii
MBI19_g07500_MAGBIO Magnolia biondii
MD14G1088300 Malus domestica
Medtr7g089140 Medicago truncatula
MELO3C009729.2 Cucumis melo
Migut.J01632 Erythranthe guttata
Migut.K00147 Erythranthe guttata
MSTRG.19785 Avicennia marina
MSTRG.6331 Avicennia marina
Nitab4.5_0000062g0160 Nicotiana tabacum
Nitab4.5_0000812g0010 Nicotiana tabacum
Nitab4.5_0002869g0070 Nicotiana tabacum
Nitab4.5_0007477g0010 Nicotiana tabacum
Nn1g07932 Nelumbo nucifera
Nn2g11787 Nelumbo nucifera
Nn2g14656 Nelumbo nucifera
Nn3g19826 Nelumbo nucifera
Nn7g36909 Nelumbo nucifera
Oeu005221.1 Olea europaea
Oeu024613.1 Olea europaea
Oeu027954.1 Olea europaea
Os03g0364700 Oryza sativa ssp. japonica
Os05g0414100 Oryza sativa ssp. japonica
Os06g0315900 Oryza sativa ssp. japonica
Os07g0642600 Oryza sativa ssp. japonica
Peaxi162Scf00003g05036 Petunia axillaris
Peaxi162Scf00003g05132 Petunia axillaris
Peaxi162Scf00003g05135 Petunia axillaris
Peaxi162Scf01487g00006 Petunia axillaris
PGR042G0425 Punica granatum
PGSC0003DMG400028192 Solanum tuberosum
PGSC0003DMG400035998 Solanum tuberosum
Phvul.001G120200 Phaseolus vulgaris
Phvul.007G239100 Phaseolus vulgaris
Potri.006G035500 Populus trichocarpa
Potri.016G033300 Populus trichocarpa
Pp3c6_10210 Physcomitrium patens
Prupe.7G028700 Prunus persica
Psat3g080480 Pisum sativum
PSO339G3611 Papaver somniferum
PSO339G5287 Papaver somniferum
PSO384G3352 Papaver somniferum
PSO384G4835 Papaver somniferum
QL03p014691 Quercus lobata
QL04p073864 Quercus lobata
QL07p012326 Quercus lobata
QL07p012378 Quercus lobata
RcHm_v2.0_Chr1g0352691 Rosa chinensis
RcHm_v2.0_Chr2g0150411 Rosa chinensis
Rhsim04G0114000 Rhododendron simsii
Sabra02G0120100 Salix brachista
Sabra06G0023800 Salix brachista
Sabra16G0036400 Salix brachista
SalBow1G7393 Salvia bowleyana
SalBow6G2849 Salvia bowleyana
Sc13g0000980 Simmondsia chinensis
Sc19g0008100 Simmondsia chinensis
Sed0019660 Sechium edule
Sed0023770 Sechium edule
SEGI_11259 Sequoiadendron giganteum
SEGI_20583 Sequoiadendron giganteum
SGA_v2.0_scaffold106G30532 Striga asiatica
SGA_v2.0_scaffold66G22278 Striga asiatica
SGA_v2.0_scaffold69G23165 Striga asiatica
SGA_v2.0_scaffold7G03651 Striga asiatica
SMO117G0242 Selaginella moellendorffii
SMO203G0158 Selaginella moellendorffii
SMO361G0101 Selaginella moellendorffii
Solyc03g044350.3 Solanum lycopersicum
Solyc10g078350.2 Solanum lycopersicum
Solyc10g080930.2 Solanum lycopersicum
Solyc12g062930.3 Solanum lycopersicum
Solyc12g062935.1 Solanum lycopersicum
Sopen10g029010 Solanum pennellii
Sopen10g031440 Solanum pennellii
Sp3g09150 Schrenkiella parvula
Sp6g37700 Schrenkiella parvula
TAR375G0992 Trochodendron aralioides
TAR623G0194 Trochodendron aralioides
TAR633G1508 Trochodendron aralioides
TAR636G0768 Trochodendron aralioides
THA.LOC104823166 Tarenaya hassleriana
THA.LOC104826877 Tarenaya hassleriana
Thecc.05G121400 Theobroma cacao
Thhalv10013510m.g Eutrema salsugineum
TPR.G15099 Trifolium pratense
TPR.G16085 Trifolium pratense
TWI53G1609 Tripterygium wilfordii
TWI74G0428 Tripterygium wilfordii
TWI77G0717 Tripterygium wilfordii
unitig_21.g20685 Utricularia gibba
unitig_744.g24176 Utricularia gibba
vmacro08996 Vaccinium macrocarpon
VMungo0720G0912 Vigna mungo
VMungo1383G1614 Vigna mungo
VMungo1383G2045 Vigna mungo
Zm00001eb110330 Zea mays
Zm00001eb129350 Zea mays
Zm00001eb164430 Zea mays
Zm00001eb329070 Zea mays
Zm00001eb349390 Zea mays
Zm00001eb394260 Zea mays

User provided reference genes

Program Settings