Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p19270 Brassica napus
A01p19280 Brassica napus
A01p19290 Brassica napus
A03p57550 Brassica napus
A03p57560 Brassica napus
A08p20340 Brassica napus
Aa31LG11G3520 Aethionema arabicum
Aa31LG3G9500 Aethionema arabicum
Aa31sc34G10 Aethionema arabicum
Aa31sc41G10 Aethionema arabicum
Aa31sc41G20 Aethionema arabicum
Aa31sc41G80 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.2403 Anthoceros agrestis
Actinidia08725 Actinidia chinensis
Actinidia30056 Actinidia chinensis
Actinidia34292 Actinidia chinensis
Actinidia39433 Actinidia chinensis
Ah.04g157400 Amaranthus hybridus
Ah.04g157410 Amaranthus hybridus
Ah.04g157480 Amaranthus hybridus
Ah.13g071120 Amaranthus hybridus
AL6G35730 Arabidopsis lyrata
AL7G24770 Arabidopsis lyrata
AL7G24780 Arabidopsis lyrata
AL7G24790 Arabidopsis lyrata
Aqoxy5G04405 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0H0ATF Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.1XTR65 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.57MGW2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MWN8UA Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.N0CQZM Arachis hypogaea
AT4G27860 Arabidopsis thaliana
AT4G27870 Arabidopsis thaliana
AT5G24290 Arabidopsis thaliana
ATR0197G001 Amborella trichopoda
ATR0197G007 Amborella trichopoda
ATR0508G001 Amborella trichopoda
ATR0620G053 Amborella trichopoda
Atru.chr12.2512 Acer truncatum
Atru.chr12.2513 Acer truncatum
Atru.ctg794.3 Acer truncatum
Atru.ctg794.6 Acer truncatum
AUR62005938 Chenopodium quinoa
AUR62005939 Chenopodium quinoa
AUR62028124 Chenopodium quinoa
AUR62028125 Chenopodium quinoa
BcaB03g12544 Brassica carinata
BcaC06g32657 Brassica carinata
BcaC06g32659 Brassica carinata
BcaC07g38295 Brassica carinata
BcaC09g50532 Brassica carinata
BcaC09g50533 Brassica carinata
BcaC09g50534 Brassica carinata
BcaNung01220 Brassica carinata
BcaNung01616 Brassica carinata
BcaNung01617 Brassica carinata
BcaNung01618 Brassica carinata
BolC1t02378H Brassica oleracea
BolC1t02379H Brassica oleracea
BolC1t02380H Brassica oleracea
BolC7t44874H Brassica oleracea
BolC7t46055H Brassica oleracea
BolC7t46056H Brassica oleracea
BolC8t48725H Brassica oleracea
BraA01t01868Z Brassica rapa
BraA01t01869Z Brassica rapa
BraA01t01870Z Brassica rapa
BraA03t14823Z Brassica rapa
BraA06t26429Z Brassica rapa
BraA08t33992Z Brassica rapa
C01p24220 Brassica napus
C01p24230 Brassica napus
C01p24240 Brassica napus
C07p43480 Brassica napus
C07p55770 Brassica napus
C07p55780 Brassica napus
C08p10390 Brassica napus
CAN.G303.64 Capsicum annuum
CAN.G736.6 Capsicum annuum
CAN.G736.7 Capsicum annuum
CAN.G736.8 Capsicum annuum
CANSAT01G0275 Cannabis sativa
CANSAT01G2029 Cannabis sativa
CANSAT01G2697 Cannabis sativa
CANSAT01G2819 Cannabis sativa
CANSAT01G2857 Cannabis sativa
CARHR189210 Cardamine hirsuta
CARHR235560 Cardamine hirsuta
CARHR235570 Cardamine hirsuta
Carub.0006s2206 Capsella rubella
Carub.0007s1295 Capsella rubella
Carub.0007s1296 Capsella rubella
Carub.0007s1298 Capsella rubella
Ca_05546_v3 Cicer arietinum L.
Ca_23228_v3 Cicer arietinum L.
Cc01_g16730 Coffea canephora
Cc01_g16750 Coffea canephora
Cc02_g00540 Coffea canephora
CDE02G0758 Ceratophyllum demersum
CDE04G1268 Ceratophyllum demersum
Ciclev10019325m.g Citrus clementina
CiPaw.01G050200 Carya illinoinensis
CiPaw.02G023300 Carya illinoinensis
ClCG09G008580 Citrullus lanatus
ClCG09G008590 Citrullus lanatus
ClCG09G008750 Citrullus lanatus
ClCG09G008760 Citrullus lanatus
COL.COLO4_14404 Corchorus olitorius
Cpa.g.sc3.193 Carica papaya
Cpa.g.sc3.194 Carica papaya
CsaV3_7G026380 Cucumis sativus L.
CsaV3_7G026400 Cucumis sativus L.
CSS0007068 Camellia sinensis var. sinensis
CSS0043654 Camellia sinensis var. sinensis
CSS0046818 Camellia sinensis var. sinensis
DCAR_004737 Daucus carota
DCAR_004738 Daucus carota
DCAR_008996 Daucus carota
DCAR_020395 Daucus carota
Dinv19176 Davidia involucrata
Dinv19177 Davidia involucrata
Dinv29186 Davidia involucrata
Duzib084G1402 Durio zibethinus
ECA246G2041 Erigeron canadensis
ECA247G3257 Erigeron canadensis
ECA247G3284 Erigeron canadensis
ECA247G4040 Erigeron canadensis
ECA247G4087 Erigeron canadensis
ECA248G0992 Erigeron canadensis
EL10Ac3g05122 Beta vulgaris
EL10Ac3g05123 Beta vulgaris
Eucgr.A00980 Eucalyptus grandis
Eucgr.A00981 Eucalyptus grandis
FAN24G0567 Fragaria x ananassa
FAN24G3132 Fragaria x ananassa
FAN27G0137 Fragaria x ananassa
FAN27G2635 Fragaria x ananassa
FvH4_2g18570 Fragaria vesca
FvH4_2g18580 Fragaria vesca
Glyma.02G220500 Glycine max
Glyma.03G084200 Glycine max
Glyma.04G225300 Glycine max
Glyma.14G187300 Glycine max
Gohir.A12G244200 Gossypium hirsutum
Gohir.D12G245100 Gossypium hirsutum
Gorai.008G262700 Gossypium raimondii
GSVIVG01004945001 Vitis vinifera
GSVIVG01004948001 Vitis vinifera
GSVIVG01005224001 Vitis vinifera
GSVIVG01005227001 Vitis vinifera
GSVIVG01006950001 Vitis vinifera
HanXRQChr01g0002711 Helianthus annuus
HanXRQChr01g0015261 Helianthus annuus
HanXRQChr02g0048901 Helianthus annuus
HanXRQChr07g0187591 Helianthus annuus
HanXRQChr07g0187611 Helianthus annuus
HanXRQChr09g0238581 Helianthus annuus
HanXRQChr09g0252091 Helianthus annuus
HanXRQChr10g0279501 Helianthus annuus
Haze_15256 Corylus avellana
Haze_19386 Corylus avellana
Haze_19387 Corylus avellana
Hma1.2p1_1235F.1_g269200 Hydrangea macrophylla
Lalb_Chr08g0239371 Lupinus albus
Lalb_Chr12g0209891 Lupinus albus
Lalb_Chr12g0209901 Lupinus albus
Lalb_Chr12g0209911 Lupinus albus
Lj2A1126G36 Lonicera japonica
Lj3g0002204 Lotus japonicus
LjContig00155g0003282 Lotus japonicus
Lsat_1_v5_gn_0_45120 Lactuca sativa
Lsat_1_v5_gn_5_115820 Lactuca sativa
Lsat_1_v5_gn_6_117360 Lactuca sativa
Lsat_1_v5_gn_9_15181 Lactuca sativa
Manes.05G196600 Manihot esculenta
Manes.12G047100 Manihot esculenta
Mapoly0042s0106 Marchantia polymorpha
Mapoly0056s0072 Marchantia polymorpha
Mapoly0059s0053 Marchantia polymorpha
MBI19_g04825_MAGBIO Magnolia biondii
MD05G1171900 Malus domestica
MD10G1160200 Malus domestica
Medtr5g068580 Medicago truncatula
Medtr8g012900 Medicago truncatula
MELO3C021084.2 Cucumis melo
MELO3C021085.2 Cucumis melo
Migut.F00115 Erythranthe guttata
Nitab4.5_0000021g0250 Nicotiana tabacum
Nitab4.5_0000045g0480 Nicotiana tabacum
Nitab4.5_0000499g0060 Nicotiana tabacum
Nitab4.5_0001422g0010 Nicotiana tabacum
Nitab4.5_0002691g0020 Nicotiana tabacum
Nitab4.5_0003317g0010 Nicotiana tabacum
Nn3g18727 Nelumbo nucifera
Oeu009711.1 Olea europaea
Oeu009712.1 Olea europaea
Oeu055429.1 Olea europaea
Oeu061048.2 Olea europaea
Os06g0103800 Oryza sativa ssp. japonica
Peaxi162Scf00068g02513 Petunia axillaris
Peaxi162Scf00068g02521 Petunia axillaris
Peaxi162Scf01650g00048 Petunia axillaris
PGR042G0866 Punica granatum
PGR042G3103 Punica granatum
PGSC0003DMG400000570 Solanum tuberosum
PGSC0003DMG400027948 Solanum tuberosum
Phvul.008G187600 Phaseolus vulgaris
Phvul.009G040800 Phaseolus vulgaris
Phvul.010G021600 Phaseolus vulgaris
Phvul.010G021700 Phaseolus vulgaris
Potri.001G127900 Populus trichocarpa
Potri.012G004000 Populus trichocarpa
Pp3c20_17480 Physcomitrium patens
Pp3c23_5510 Physcomitrium patens
Prupe.8G199300 Prunus persica
Psat2g059960 Pisum sativum
Psat4g203680 Pisum sativum
Psat4g203720 Pisum sativum
PSO063G6136 Papaver somniferum
PSO782G1712 Papaver somniferum
QL09p051285 Quercus lobata
QL09p051502 Quercus lobata
RcHm_v2.0_Chr6g0284131 Rosa chinensis
RcHm_v2.0_Chr6g0284141 Rosa chinensis
RcHm_v2.0_Chr6g0284151 Rosa chinensis
RcHm_v2.0_Chr6g0284161 Rosa chinensis
Rhsim03G0218800 Rhododendron simsii
Sabra01G0098400 Salix brachista
Sabra02G0175300 Salix brachista
Sabra12G0000100 Salix brachista
Sabra15G0000100 Salix brachista
SalBow4G0609 Salvia bowleyana
SalBow6G0081 Salvia bowleyana
SalBow6G4008 Salvia bowleyana
SalBow6G6112 Salvia bowleyana
Sc19g0000350 Simmondsia chinensis
Sed0005228 Sechium edule
Sed0006148 Sechium edule
Sed0020556 Sechium edule
Sed0021465 Sechium edule
Sed0023147 Sechium edule
Sed0024974 Sechium edule
SEGI_11548 Sequoiadendron giganteum
SGA_v2.0_scaffold44G16876 Striga asiatica
SMO347G0454 Selaginella moellendorffii
Solyc03g096800.4 Solanum lycopersicum
Solyc09g059460.4 Solanum lycopersicum
Sopen03g027540 Solanum pennellii
Sopen09g022630 Solanum pennellii
Sp2g23060 Schrenkiella parvula
Sp7g25800 Schrenkiella parvula
Sp7g25810 Schrenkiella parvula
Sp7g25820 Schrenkiella parvula
Sp7g25830 Schrenkiella parvula
Sp7g25840 Schrenkiella parvula
TAR374G0959 Trochodendron aralioides
THA.LOC104798903 Tarenaya hassleriana
THA.LOC104811916 Tarenaya hassleriana
THA.LOC104825147 Tarenaya hassleriana
Thecc.03G212700 Theobroma cacao
Thhalv10004019m.g Eutrema salsugineum
Thhalv10024497m.g Eutrema salsugineum
Thhalv10024733m.g Eutrema salsugineum
Thhalv10027255m.g Eutrema salsugineum
TPR.G17148 Trifolium pratense
TPR.G5852 Trifolium pratense
TWI63G0487 Tripterygium wilfordii
unitig_52.g17700 Utricularia gibba
vmacro06479 Vaccinium macrocarpon
VMungo0331G1090 Vigna mungo
VMungo0331G1378 Vigna mungo
VMungo0647G0973 Vigna mungo
VMungo1309G1974 Vigna mungo
Zm00001eb268500 Zea mays

User provided reference genes

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