Gene: AT4G27860
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT4G27860
- Transcript Identifier AT4G27860.2
- Gene Type Coding gene
- Location Chr4 : 13873808-13876240 : positive
Gene Family Information
- ID HOM05D002473
- #Genes/#Species 274/91
- Phylogenetic origin
- ID ORTHO05D002666
- #Genes/#Species 271/92
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid AT4G27860.2
- symbol MEB1
- full_name MEMBRANE OF ER BODY 1
- uniprot Q8W4P8
Descriptions
- Description vacuolar iron transporter (VIT) family protein
- Computational description vacuolar iron transporter (VIT) family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF125, transmembrane (InterPro:IPR008217), Cytokine, IL-1-like (InterPro:IPR008996); BEST Arabidopsis thaliana protein match is: Vacuolar iron transporter (VIT) family protein (TAIR:AT4G27870.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
- Computational description vacuolar iron transporter (VIT) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane; EXPRESSED IN: embryo, hypocotyl, root, pedicel, leaf; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, C globular stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF125, transmembrane (InterPro:IPR008217), Cytokine, IL-1-like (InterPro:IPR008996); BEST Arabidopsis thaliana protein match is: Vacuolar iron transporter (VIT) family protein (TAIR:AT4G27870.1).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0030026 | IBA IEA | Gene Ontology | cellular manganese ion homeostasis | 1 |
| GO:0030026 | IEA | InterPro | cellular manganese ion homeostasis | |
| GO:0034755 | IEA | GOA Database | iron ion transmembrane transport | |
| GO:0071421 | IEA | GOA Database | manganese ion transmembrane transport | |
| GO:0006880 | IBA | Gene Ontology | intracellular sequestering of iron ion | 1 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005384 | IGI IBA IEA | Gene Ontology | manganese ion transmembrane transporter activity | 1 2 |
| GO:0005384 | IEA | InterPro | manganese ion transmembrane transporter activity | |
| GO:0005381 | IGI IBA | Gene Ontology | iron ion transmembrane transporter activity | 1 2 |
| GO:0005515 | IPI | Gene Ontology | protein binding | 2 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0010168 | IDA IBA | Gene Ontology | ER body | 1 2 |
| GO:0005783 | IDA IEA | GOA Database | endoplasmic reticulum | |
| GO:0005783 | HDA IBA | Gene Ontology | endoplasmic reticulum | 1 3 |
| GO:0016020 | IEA | GOA Database | membrane | |
| GO:0016020 | IBA | Gene Ontology | membrane | 1 |
| GO:0016021 | IEA | GOA Database | integral component of membrane | |
| GO:0005789 | IEA | GOA Database | endoplasmic reticulum membrane | |
| GO:0005634 | ISM | Gene Ontology | nucleus |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 24.2.12.2 | Solute transport.carrier-mediated transport.VIT family.metal cation transporter (MEB) |