Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p11610 Brassica napus
Aa31LG3G9040 Aethionema arabicum
Aa31LG3G9050 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.3313 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.356 Anthoceros agrestis
Actinidia08585 Actinidia chinensis
Actinidia08586 Actinidia chinensis
Actinidia34161 Actinidia chinensis
Actinidia34162 Actinidia chinensis
Ah.07g206480 Amaranthus hybridus
Ah.07g206490 Amaranthus hybridus
AL8G27230 Arabidopsis lyrata
AL8G27240 Arabidopsis lyrata
Aqoxy5G00658 Aquilegia oxysepala
Aqoxy5G00661 Aquilegia oxysepala
Aqoxy5G00666 Aquilegia oxysepala
Aqoxy5G04085 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.77GMEU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.9T5AB0 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.R026RD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TJ5MNL Arachis hypogaea
AT5G52800 Arabidopsis thaliana
AT5G52810 Arabidopsis thaliana
ATR0661G059 Amborella trichopoda
ATR0661G279 Amborella trichopoda
Atru.BG.183.p Acer truncatum
Atru.chr1.341 Acer truncatum
AUR62021107 Chenopodium quinoa
AUR62021108 Chenopodium quinoa
AUR62031432 Chenopodium quinoa
AUR62031433 Chenopodium quinoa
BcaB05g21981 Brassica carinata
BcaB05g21982 Brassica carinata
BcaC03g14498 Brassica carinata
BcaC03g14499 Brassica carinata
BolC2t08072H Brassica oleracea
BraA02t06223Z Brassica rapa
C02p19370 Brassica napus
CAN.G204.25 Capsicum annuum
CAN.G290.13 Capsicum annuum
CANSAT01G1695 Cannabis sativa
CANSAT21G1380 Cannabis sativa
CANSAT21G2443 Cannabis sativa
CARHR265740 Cardamine hirsuta
Carub.0008s1296 Capsella rubella
Carub.0008s1297 Capsella rubella
Ca_10714_v3 Cicer arietinum L.
Ca_26606_v3 Cicer arietinum L.
CBR_g36403 Chara braunii
CBR_g46242 Chara braunii
CBR_g47978 Chara braunii
CBR_g81559 Chara braunii
Cc02_g02280 Coffea canephora
Cc02_g02290 Coffea canephora
CDE07G0391 Ceratophyllum demersum
Cfa016295 Carpinus fangiana
Cfa016296 Carpinus fangiana
Cfa016297 Carpinus fangiana
Cfa016299 Carpinus fangiana
Cfa026856 Carpinus fangiana
Ciclev10006645m.g Citrus clementina
Ciclev10006841m.g Citrus clementina
CiPaw.05G261500 Carya illinoinensis
CiPaw.05G261600 Carya illinoinensis
ClCG05G008450 Citrullus lanatus
ClCG05G008460 Citrullus lanatus
COL.COLO4_30296 Corchorus olitorius
COL.COLO4_30301 Corchorus olitorius
Cpa.g.sc107.121 Carica papaya
Cpa.g.sc107.122 Carica papaya
Cre06.g272760 Chlamydomonas reinhardtii
Cre12.g553253 Chlamydomonas reinhardtii
Cre17.g705150 Chlamydomonas reinhardtii
CsaV3_3G017530 Cucumis sativus L.
CsaV3_3G017540 Cucumis sativus L.
CSS0010708 Camellia sinensis var. sinensis
CSS0029570 Camellia sinensis var. sinensis
CSS0047166 Camellia sinensis var. sinensis
DCAR_005086 Daucus carota
DCAR_008895 Daucus carota
DCAR_010004 Daucus carota
DCAR_014522 Daucus carota
DCAR_018565 Daucus carota
DCAR_029292 Daucus carota
DCAR_029376 Daucus carota
DCAR_030059 Daucus carota
DCAR_030105 Daucus carota
Dinv35264 Davidia involucrata
Dinv35265 Davidia involucrata
Duzib205G0883 Durio zibethinus
Duzib205G0901 Durio zibethinus
ECA232G4104 Erigeron canadensis
ECA238G0507 Erigeron canadensis
EL10Ac3g05400 Beta vulgaris
EL10Ac3g05401 Beta vulgaris
Eucgr.A02722 Eucalyptus grandis
Eucgr.C03079 Eucalyptus grandis
Eucgr.C03230 Eucalyptus grandis
Eucgr.L01486 Eucalyptus grandis
FAN01G0734 Fragaria x ananassa
FAN01G1269 Fragaria x ananassa
FAN03G1432 Fragaria x ananassa
FAN03G2954 Fragaria x ananassa
FAN03G3136 Fragaria x ananassa
FAN05G2518 Fragaria x ananassa
FAN06G0430 Fragaria x ananassa
FAN06G0587 Fragaria x ananassa
FAN06G3650 Fragaria x ananassa
FAN06G4105 Fragaria x ananassa
FAN09G0727 Fragaria x ananassa
FAN09G3189 Fragaria x ananassa
FAN09G4610 Fragaria x ananassa
FAN10G1194 Fragaria x ananassa
FAN10G1435 Fragaria x ananassa
FAN10G1848 Fragaria x ananassa
FAN10G2552 Fragaria x ananassa
FAN10G3921 Fragaria x ananassa
FAN14G0324 Fragaria x ananassa
FAN16G1547 Fragaria x ananassa
FAN21G0521 Fragaria x ananassa
FAN22G1212 Fragaria x ananassa
FAN23G0684 Fragaria x ananassa
FAN25G1827 Fragaria x ananassa
FAN25G2717 Fragaria x ananassa
FAN25G3664 Fragaria x ananassa
FAN27G0148 Fragaria x ananassa
FAN27G0541 Fragaria x ananassa
FAN27G0848 Fragaria x ananassa
FAN28G0992 Fragaria x ananassa
FvH4_7g30390 Fragaria vesca
FvH4_7g30420 Fragaria vesca
Glyma.09G129600 Glycine max
Glyma.10G230300 Glycine max
Glyma.20G163100 Glycine max
Gohir.A12G253500 Gossypium hirsutum
Gohir.A12G253600 Gossypium hirsutum
Gohir.D12G255800 Gossypium hirsutum
Gohir.D12G255900 Gossypium hirsutum
Gorai.008G273900 Gossypium raimondii
Gorai.008G274000 Gossypium raimondii
GSVIVG01028828001 Vitis vinifera
GSVIVG01028829001 Vitis vinifera
HanXRQChr07g0206921 Helianthus annuus
HanXRQChr15g0494161 Helianthus annuus
Haze_00055 Corylus avellana
Haze_00056 Corylus avellana
Hma1.2p1_0274F.1_g110040 Hydrangea macrophylla
Hma1.2p1_2578F.1_g324720 Hydrangea macrophylla
HPP92_015080 Vanilla planifolia
HPP92_015081 Vanilla planifolia
HPP92_015083 Vanilla planifolia
HPP92_028539 Vanilla planifolia
HPP92_028543 Vanilla planifolia
Hund04793 Selenicereus undatus
Lalb_Chr02g0141271 Lupinus albus
Lalb_Chr19g0130571 Lupinus albus
Lj1C1006G4 Lonicera japonica
Lj2g0016146 Lotus japonicus
Lj5g0014102 Lotus japonicus
Lsat_1_v5_gn_2_131440 Lactuca sativa
Lsat_1_v5_gn_9_56800 Lactuca sativa
Manes.06G153300 Manihot esculenta
Manes.14G021500 Manihot esculenta
Mapoly0033s0116 Marchantia polymorpha
Mapoly0051s0060 Marchantia polymorpha
MBI04_g15062_MAGBIO Magnolia biondii
MBI04_g15063_MAGBIO Magnolia biondii
MBI04_g26956_MAGBIO Magnolia biondii
MBI11_g09066_MAGBIO Magnolia biondii
MCO05G070 Micromonas commoda
MCO12G313 Micromonas commoda
MD01G1209700 Malus domestica
MD01G1209800 Malus domestica
MD07G1279900 Malus domestica
Medtr1g099620 Medicago truncatula
Medtr6g052330 Medicago truncatula
Medtr6g052340 Medicago truncatula
MELO3C006954.2 Cucumis melo
MELO3C006956.2 Cucumis melo
Migut.F00281 Erythranthe guttata
Migut.F01082 Erythranthe guttata
MSTRG.8701 Avicennia marina
MSTRG.8702 Avicennia marina
Nitab4.5_0004854g0030 Nicotiana tabacum
Nitab4.5_0007593g0010 Nicotiana tabacum
Nitab4.5_0007593g0030 Nicotiana tabacum
Nitab4.5_0008234g0010 Nicotiana tabacum
Nitab4.5_0016317g0010 Nicotiana tabacum
Nn1g01670 Nelumbo nucifera
Nn6g32108 Nelumbo nucifera
Nn6g32109 Nelumbo nucifera
Oeu036031.1 Olea europaea
Oeu058603.1 Olea europaea
Os07g0467900 Oryza sativa ssp. japonica
Os10g0533200 Oryza sativa ssp. japonica
Peaxi162Scf00023g00818 Petunia axillaris
Peaxi162Scf00023g00823 Petunia axillaris
Peaxi162Scf00618g00066 Petunia axillaris
PGR042G3288 Punica granatum
PGR142G3674 Punica granatum
PGSC0003DMG400037424 Solanum tuberosum
PGSC0003DMG402028895 Solanum tuberosum
Phvul.004G106200 Phaseolus vulgaris
Phvul.007G075300 Phaseolus vulgaris
Potri.004G072500 Populus trichocarpa
Potri.017G148000 Populus trichocarpa
Pp3c1_12340 Physcomitrium patens
Pp3c1_3280 Physcomitrium patens
Pp3s46_180 Physcomitrium patens
PRCOL_00005773 Prasinoderma coloniale
Prupe.2G301900 Prunus persica
Prupe.2G302000 Prunus persica
Psat0s1616g0040 Pisum sativum
Psat0s1684g0080 Pisum sativum
Psat6g195800 Pisum sativum
PSO063G0346 Papaver somniferum
PSO170G2577 Papaver somniferum
PSO478G0039 Papaver somniferum
QL09p012480 Quercus lobata
QL09p012523 Quercus lobata
QL09p012529 Quercus lobata
RcHm_v2.0_Chr1g0361031 Rosa chinensis
RcHm_v2.0_Chr1g0378531 Rosa chinensis
RcHm_v2.0_Chr1g0378551 Rosa chinensis
RcHm_v2.0_Chr2g0085031 Rosa chinensis
RcHm_v2.0_Chr2g0113271 Rosa chinensis
RcHm_v2.0_Chr3g0497461 Rosa chinensis
Rhsim03G0191700 Rhododendron simsii
Rhsim10G0052100 Rhododendron simsii
Sabra04G0047800 Salix brachista
Sabra17G0121400 Salix brachista
Sabra17G0121500 Salix brachista
Sabra17G0121600 Salix brachista
Sabra17G0123300 Salix brachista
Sabra17G0123700 Salix brachista
SalBow2G2390 Salvia bowleyana
SalBow4G2218 Salvia bowleyana
Sc13g0009230 Simmondsia chinensis
Sc13g0009250 Simmondsia chinensis
Sed0017948 Sechium edule
Sed0022656 Sechium edule
SEGI_25618 Sequoiadendron giganteum
SEGI_28877 Sequoiadendron giganteum
SEGI_38444 Sequoiadendron giganteum
SGA_v2.0_scaffold10G05284 Striga asiatica
SGA_v2.0_scaffold60G21117 Striga asiatica
SHI09096 Sapria himalayana
SMO103G0001 Selaginella moellendorffii
Solyc06g036330.1 Solanum lycopersicum
Solyc12g044350.1 Solanum lycopersicum
Sopen06g012110 Solanum pennellii
Sopen12g022610 Solanum pennellii
Sp6g14950 Schrenkiella parvula
TAR374G0466 Trochodendron aralioides
TAR374G1583 Trochodendron aralioides
THA.LOC104811947 Tarenaya hassleriana
THA.LOC104811948 Tarenaya hassleriana
Thecc.03G185500 Theobroma cacao
Thecc.03G185600 Theobroma cacao
Thhalv10012991m.g Eutrema salsugineum
Thhalv10014103m.g Eutrema salsugineum
TPR.G7770 Trifolium pratense
TPR.G9187 Trifolium pratense
TWI23G0306 Tripterygium wilfordii
TWI23G1289 Tripterygium wilfordii
unitig_26.g10201 Utricularia gibba
unitig_52.g17726 Utricularia gibba
vmacro06619 Vaccinium macrocarpon
vmacro06620 Vaccinium macrocarpon
vmacro06621 Vaccinium macrocarpon
VMungo0464G1215 Vigna mungo
VMungo0720G1208 Vigna mungo
VMungo0720G2925 Vigna mungo
Zm00001eb021880 Zea mays
Zm00001eb320240 Zea mays

User provided reference genes

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