Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p09570 Brassica napus
A03p13880 Brassica napus
A06p08550 Brassica napus
A10p12980 Brassica napus
Aa31LG1G1610 Aethionema arabicum
Aa31LG2G6240 Aethionema arabicum
Aa31LG3G11610 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.2179 Anthoceros agrestis
Actinidia01371 Actinidia chinensis
Actinidia05010 Actinidia chinensis
Actinidia08113 Actinidia chinensis
Actinidia30409 Actinidia chinensis
Actinidia37458 Actinidia chinensis
Ah.03g133540 Amaranthus hybridus
Ah.03g133550 Amaranthus hybridus
Ah.06g181410 Amaranthus hybridus
AL1G24870 Arabidopsis lyrata
AL8G31250 Arabidopsis lyrata
Aqoxy1G01673 Aquilegia oxysepala
Aqoxy5G03629 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.BMQ6HD Arachis hypogaea
AT1G13190 Arabidopsis thaliana
AT5G55670 Arabidopsis thaliana
ATR0691G225 Amborella trichopoda
ATR0824G184 Amborella trichopoda
Atru.chr11.2190 Acer truncatum
Atru.chr2.3685 Acer truncatum
AUR62005526 Chenopodium quinoa
AUR62017098 Chenopodium quinoa
AUR62024211 Chenopodium quinoa
BcaB01g04355 Brassica carinata
BcaB08g35930 Brassica carinata
BcaC01g06386 Brassica carinata
BcaC04g20206 Brassica carinata
BcaC05g25074 Brassica carinata
BcaC05g25077 Brassica carinata
BcaC07g41662 Brassica carinata
BolC2t07697H Brassica oleracea
BolC3t14056H Brassica oleracea
BolC9t57519H Brassica oleracea
BraA02t06021Z Brassica rapa
BraA03t10691Z Brassica rapa
BraA06t24051Z Brassica rapa
BraA10t43392Z Brassica rapa
C02p15920 Brassica napus
C03p16330 Brassica napus
C05p10160 Brassica napus
C09p46690 Brassica napus
CANSAT01G0319 Cannabis sativa
CANSAT11G2683 Cannabis sativa
CARHR013560 Cardamine hirsuta
CARHR268990 Cardamine hirsuta
Carub.0001s1292 Capsella rubella
Carub.0008s1604 Capsella rubella
Ca_22138_v3 Cicer arietinum L.
Ca_30466_v3 Cicer arietinum L.
CBR_g46583 Chara braunii
Cc05_g14910 Coffea canephora
Cc11_g16180 Coffea canephora
CDE02G0353 Ceratophyllum demersum
CDE09G0816 Ceratophyllum demersum
Cfa009263 Carpinus fangiana
Cfa020196 Carpinus fangiana
Ciclev10030915m.g Citrus clementina
Ciclev10030917m.g Citrus clementina
CiPaw.05G176500 Carya illinoinensis
CiPaw.11G203500 Carya illinoinensis
CiPaw.12G137900 Carya illinoinensis
ClCG09G021320 Citrullus lanatus
ClCG09G021330 Citrullus lanatus
COL.COLO4_09825 Corchorus olitorius
COL.COLO4_23527 Corchorus olitorius
COL.COLO4_23537 Corchorus olitorius
Cpa.g.sc12.150 Carica papaya
Cpa.g.sc33.86 Carica papaya
Cre08.g384950 Chlamydomonas reinhardtii
CsaV3_7G011270 Cucumis sativus L.
CsaV3_7G012660 Cucumis sativus L.
CsaV3_7G012700 Cucumis sativus L.
CSS0003790 Camellia sinensis var. sinensis
CSS0005806 Camellia sinensis var. sinensis
CSS0010014 Camellia sinensis var. sinensis
CSS0033067 Camellia sinensis var. sinensis
CSS0046473 Camellia sinensis var. sinensis
DCAR_007031 Daucus carota
DCAR_007032 Daucus carota
DCAR_007033 Daucus carota
DCAR_031172 Daucus carota
DCAR_031173 Daucus carota
Dinv10329 Davidia involucrata
Dinv11029 Davidia involucrata
Dinv11030 Davidia involucrata
Dinv14758 Davidia involucrata
Dinv40855 Davidia involucrata
Duzib068G0761 Durio zibethinus
Duzib084G0378 Durio zibethinus
Duzib205G0891 Durio zibethinus
ECA234G1912 Erigeron canadensis
ECA234G2221 Erigeron canadensis
ECA240G0531 Erigeron canadensis
EL10Ac4g07574 Beta vulgaris
Eucgr.F03691 Eucalyptus grandis
FAN07G1142 Fragaria x ananassa
FAN11G0549 Fragaria x ananassa
FAN11G3212 Fragaria x ananassa
FAN12G1212 Fragaria x ananassa
FAN12G2158 Fragaria x ananassa
FAN16G1153 Fragaria x ananassa
FAN17G1806 Fragaria x ananassa
FAN17G2317 Fragaria x ananassa
FAN21G2296 Fragaria x ananassa
FAN22G0221 Fragaria x ananassa
FAN22G0558 Fragaria x ananassa
FAN22G0649 Fragaria x ananassa
FAN22G0845 Fragaria x ananassa
FAN22G1604 Fragaria x ananassa
FAN25G2842 Fragaria x ananassa
FAN28G1151 Fragaria x ananassa
FvH4_3g29240 Fragaria vesca
FvH4_3g29340 Fragaria vesca
FvH4_4g25160 Fragaria vesca
FvH4_4g25170 Fragaria vesca
Glyma.08G329400 Glycine max
Glyma.08G329500 Glycine max
Glyma.18G077300 Glycine max
Glyma.18G077400 Glycine max
Gohir.A04G137400 Gossypium hirsutum
Gohir.A11G032300 Gossypium hirsutum
Gohir.A11G032366 Gossypium hirsutum
Gohir.A12G179500 Gossypium hirsutum
Gohir.D04G180600 Gossypium hirsutum
Gohir.D11G035600 Gossypium hirsutum
Gohir.D12G182100 Gossypium hirsutum
Gorai.007G038400 Gossypium raimondii
Gorai.008G195400 Gossypium raimondii
Gorai.012G173800 Gossypium raimondii
GSVIVG01000588001 Vitis vinifera
GSVIVG01014675001 Vitis vinifera
HanXRQChr03g0074041 Helianthus annuus
HanXRQChr12g0385871 Helianthus annuus
HanXRQChr13g0408151 Helianthus annuus
Haze_09820 Corylus avellana
Haze_12296 Corylus avellana
Hma1.2p1_1402F.1_g281150 Hydrangea macrophylla
HPP92_015479 Vanilla planifolia
HPP92_015547 Vanilla planifolia
HPP92_015548 Vanilla planifolia
HPP92_017967 Vanilla planifolia
Hund01896 Selenicereus undatus
Lalb_Chr15g0082051 Lupinus albus
Lalb_Chr15g0082111 Lupinus albus
Lalb_Chr20g0114001 Lupinus albus
Lalb_Chr20g0114031 Lupinus albus
Lj6g0021071 Lotus japonicus
Lj6g0025765 Lotus japonicus
Lj6P817T17 Lonicera japonica
Lsat_1_v5_gn_4_2781 Lactuca sativa
Lsat_1_v5_gn_9_89900 Lactuca sativa
Manes.03G141000 Manihot esculenta
Manes.13G019800 Manihot esculenta
Mapoly0105s0028 Marchantia polymorpha
MBI15_g31906_MAGBIO Magnolia biondii
MBI17_g11953_MAGBIO Magnolia biondii
MBI17_g16505_MAGBIO Magnolia biondii
MBI17_g16506_MAGBIO Magnolia biondii
MBI18_g11458_MAGBIO Magnolia biondii
MD03G1183300 Malus domestica
MD11G1200300 Malus domestica
MD13G1106000 Malus domestica
MD16G1106200 Malus domestica
Medtr3g058990 Medicago truncatula
Medtr3g059000 Medicago truncatula
MELO3C000217.2 Cucumis melo
MELO3C024936.2 Cucumis melo
Migut.K00637 Erythranthe guttata
Migut.M01656 Erythranthe guttata
MSTRG.15794 Avicennia marina
MSTRG.546 Avicennia marina
Nitab4.5_0000041g0110 Nicotiana tabacum
Nitab4.5_0003491g0080 Nicotiana tabacum
Nitab4.5_0003491g0090 Nicotiana tabacum
Nitab4.5_0005906g0030 Nicotiana tabacum
Nitab4.5_0005906g0040 Nicotiana tabacum
Nitab4.5_0006508g0030 Nicotiana tabacum
Oeu005484.1 Olea europaea
Oeu005960.1 Olea europaea
Oeu012668.1 Olea europaea
Oeu013544.1 Olea europaea
Oeu025403.1 Olea europaea
Os04g0467300 Oryza sativa ssp. japonica
Os04g0516300 Oryza sativa ssp. japonica
Os08g0490300 Oryza sativa ssp. japonica
Peaxi162Scf00128g00625 Petunia axillaris
Peaxi162Scf01164g00123 Petunia axillaris
PGR031G0705 Punica granatum
PGR083G1251 Punica granatum
PGR083G2653 Punica granatum
PGSC0003DMG400010778 Solanum tuberosum
PGSC0003DMG400014376 Solanum tuberosum
PGSC0003DMG400022171 Solanum tuberosum
Phvul.006G057000 Phaseolus vulgaris
Phvul.006G057100 Phaseolus vulgaris
Potri.008G182500 Populus trichocarpa
Potri.010G051600 Populus trichocarpa
Pp3c11_25340 Physcomitrium patens
Pp3c7_7090 Physcomitrium patens
PRCOL_00001764 Prasinoderma coloniale
Prupe.1G240200 Prunus persica
Prupe.4G242800 Prunus persica
Psat5g168960 Pisum sativum
Psat5g169000 Pisum sativum
PSO017G0039 Papaver somniferum
PSO063G1404 Papaver somniferum
PSO478G3464 Papaver somniferum
QL03p056073 Quercus lobata
QL08p004208 Quercus lobata
RcHm_v2.0_Chr4g0432361 Rosa chinensis
RcHm_v2.0_Chr4g0432371 Rosa chinensis
RcHm_v2.0_Chr5g0053701 Rosa chinensis
Rhsim06G0229100 Rhododendron simsii
Rhsim12G0038100 Rhododendron simsii
Sabra08G0139000 Salix brachista
Sabra08G0139100 Salix brachista
Sabra10G0018500 Salix brachista
SalBow2G0913 Salvia bowleyana
Sc03g0011260 Simmondsia chinensis
Sc04g0009750 Simmondsia chinensis
Sc07g0002300 Simmondsia chinensis
Sc16g0008040 Simmondsia chinensis
Sc16g0008050 Simmondsia chinensis
Sc16g0008060 Simmondsia chinensis
Sc16g0008070 Simmondsia chinensis
Sed0019293 Sechium edule
Sed0021905 Sechium edule
SEGI_16991 Sequoiadendron giganteum
SEGI_18229 Sequoiadendron giganteum
SEGI_33105 Sequoiadendron giganteum
SEGI_40052 Sequoiadendron giganteum
SGA_v2.0_scaffold100G29588 Striga asiatica
SGA_v2.0_scaffold168G38559 Striga asiatica
SGA_v2.0_scaffold171G38876 Striga asiatica
SHI26538 Sapria himalayana
SHI33068 Sapria himalayana
SHI33069 Sapria himalayana
SHI33070 Sapria himalayana
SMO367G0428 Selaginella moellendorffii
Solyc05g013970.4 Solanum lycopersicum
Solyc07g065510.4 Solanum lycopersicum
Solyc10g005980.1 Solanum lycopersicum
Sopen05g008900 Solanum pennellii
Sopen07g033720 Solanum pennellii
Sopen10g001940 Solanum pennellii
Sp1g11710 Schrenkiella parvula
Sp6g17580 Schrenkiella parvula
TAR371G0391 Trochodendron aralioides
TAR622G0183 Trochodendron aralioides
TAR626G0268 Trochodendron aralioides
TAR629G1470 Trochodendron aralioides
TAR629G1850 Trochodendron aralioides
TAR629G2013 Trochodendron aralioides
TAR629G2256 Trochodendron aralioides
THA.LOC104813448 Tarenaya hassleriana
THA.LOC104818108 Tarenaya hassleriana
THA.LOC104824017 Tarenaya hassleriana
Thecc.02G267400 Theobroma cacao
Thecc.02G267600 Theobroma cacao
Thecc.07G014400 Theobroma cacao
Thhalv10007191m.g Eutrema salsugineum
Thhalv10012809m.g Eutrema salsugineum
TPR.G24142 Trifolium pratense
TWI38G1726 Tripterygium wilfordii
TWI39G1150 Tripterygium wilfordii
unitig_22.g6944 Utricularia gibba
unitig_8.g2915 Utricularia gibba
unitig_8.g2916 Utricularia gibba
unitig_8.g2917 Utricularia gibba
VMungo0540G2061 Vigna mungo
Zm00001eb033690 Zea mays
Zm00001eb033700 Zea mays
Zm00001eb199300 Zea mays
Zm00001eb424540 Zea mays

User provided reference genes

Program Settings