Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p19750 Brassica napus
A06p02650 Brassica napus
Aa31LG10G3430 Aethionema arabicum
Aa31LG8G7520 Aethionema arabicum
Actinidia08237 Actinidia chinensis
Actinidia22032 Actinidia chinensis
Actinidia32388 Actinidia chinensis
Actinidia40428 Actinidia chinensis
Ah.06g193010 Amaranthus hybridus
Ah.06g193230 Amaranthus hybridus
Ah.06g193290 Amaranthus hybridus
Ah.13g075940 Amaranthus hybridus
AL1G58930 Arabidopsis lyrata
AL3G34680 Arabidopsis lyrata
Aqoxy148s003 Aquilegia oxysepala
Aqoxy1G00036 Aquilegia oxysepala
Aqoxy2G00744 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.023W1F Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.DB9VBU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.F42R6R Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FN4AVZ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HJ440F Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.J37LAC Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.THM8C1 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Y4570Z Arachis hypogaea
AT1G51130 Arabidopsis thaliana
AT3G20760 Arabidopsis thaliana
ATR0332G099 Amborella trichopoda
Atru.chr3.2425 Acer truncatum
Atru.chr8.1093 Acer truncatum
AUR62000048 Chenopodium quinoa
AUR62012041 Chenopodium quinoa
AUR62015380 Chenopodium quinoa
AUR62019221 Chenopodium quinoa
BcaB01g00588 Brassica carinata
BcaB02g11212 Brassica carinata
BcaB07g33560 Brassica carinata
BcaB08g36409 Brassica carinata
BcaC05g27367 Brassica carinata
BcaC08g43285 Brassica carinata
BcaNung05399 Brassica carinata
BolC1t04197H Brassica oleracea
BolC5t32027H Brassica oleracea
BolC6t35744H Brassica oleracea
BraA05t20882Z Brassica rapa
BraA06t23474Z Brassica rapa
C05p33000 Brassica napus
C06p06340 Brassica napus
CAN.G1161.26 Capsicum annuum
CAN.G362.25 Capsicum annuum
CAN.G362.30 Capsicum annuum
CAN.G362.31 Capsicum annuum
CAN.G649.1 Capsicum annuum
CAN.G649.3 Capsicum annuum
CAN.G649.6 Capsicum annuum
CANSAT54G2624 Cannabis sativa
CANSAT64G2203 Cannabis sativa
CARHR041150 Cardamine hirsuta
CARHR096580 Cardamine hirsuta
Carub.0001s4004 Capsella rubella
Carub.0003s2072 Capsella rubella
Ca_08515_v3 Cicer arietinum L.
Ca_11413_v3 Cicer arietinum L.
CBR_g15979 Chara braunii
Cc01_g05350 Coffea canephora
Cc06_g16010 Coffea canephora
CDE04G1644 Ceratophyllum demersum
CDE07G0732 Ceratophyllum demersum
Cfa009657 Carpinus fangiana
Cfa020177 Carpinus fangiana
Cfa022199 Carpinus fangiana
Ciclev10012293m.g Citrus clementina
Ciclev10013363m.g Citrus clementina
Ciclev10015454m.g Citrus clementina
CiPaw.13G169500 Carya illinoinensis
CiPaw.14G128900 Carya illinoinensis
ClCG03G013690 Citrullus lanatus
COL.COLO4_10396 Corchorus olitorius
Cpa.g.sc85.74 Carica papaya
Cre04.g215650 Chlamydomonas reinhardtii
Cre12.g502100 Chlamydomonas reinhardtii
CsaV3_1G042360 Cucumis sativus L.
CSS0020725 Camellia sinensis var. sinensis
CSS0021237 Camellia sinensis var. sinensis
DCAR_019843 Daucus carota
DCAR_024390 Daucus carota
Dinv08063 Davidia involucrata
Dinv14289 Davidia involucrata
Dinv24570 Davidia involucrata
Dinv24650 Davidia involucrata
Dinv33844 Davidia involucrata
Duzib093G1316 Durio zibethinus
Duzib150G0436 Durio zibethinus
Duzib168G0160 Durio zibethinus
ECA238G0644 Erigeron canadensis
ECA248G3508 Erigeron canadensis
EL10Ac3g06926 Beta vulgaris
EL10Ac4g10326 Beta vulgaris
EL10Ac9g21110 Beta vulgaris
Eucgr.B02593 Eucalyptus grandis
FAN02G0951 Fragaria x ananassa
FAN05G1948 Fragaria x ananassa
FAN05G4844 Fragaria x ananassa
FAN11G0803 Fragaria x ananassa
FAN11G2419 Fragaria x ananassa
FAN14G4593 Fragaria x ananassa
FAN16G1723 Fragaria x ananassa
FAN16G3479 Fragaria x ananassa
FAN21G0262 Fragaria x ananassa
FAN21G2740 Fragaria x ananassa
FAN25G0131 Fragaria x ananassa
FAN25G3313 Fragaria x ananassa
FAN25G3330 Fragaria x ananassa
FvH4_3g44140 Fragaria vesca
FvH4_3g44150 Fragaria vesca
FvH4_6g22450 Fragaria vesca
Glyma.03G144100 Glycine max
Glyma.10G296500 Glycine max
Glyma.20G247200 Glycine max
Gohir.A01G016600 Gossypium hirsutum
Gohir.A05G066732 Gossypium hirsutum
Gohir.D01G016700 Gossypium hirsutum
Gohir.D02G126066 Gossypium hirsutum
Gohir.D03G090201 Gossypium hirsutum
Gohir.D05G069400 Gossypium hirsutum
Gohir.D07G138133 Gossypium hirsutum
Gohir.D07G156701 Gossypium hirsutum
Gohir.D11G219801 Gossypium hirsutum
Gorai.001G214400 Gossypium raimondii
Gorai.002G018400 Gossypium raimondii
Gorai.002G168700 Gossypium raimondii
Gorai.002G168800 Gossypium raimondii
Gorai.005G024400 Gossypium raimondii
Gorai.009G070400 Gossypium raimondii
Gorai.009G346200 Gossypium raimondii
Gorai.009G358700 Gossypium raimondii
Gorai.012G099800 Gossypium raimondii
GSVIVG01025357001 Vitis vinifera
GSVIVG01033510001 Vitis vinifera
HanXRQChr13g0390431 Helianthus annuus
HanXRQChr14g0451791 Helianthus annuus
Haze_19978 Corylus avellana
Haze_23021 Corylus avellana
Hma1.2p1_0386F.1_g141800 Hydrangea macrophylla
Hma1.2p1_1169F.1_g263230 Hydrangea macrophylla
HPP92_015756 Vanilla planifolia
Hund19198 Selenicereus undatus
Hund21657 Selenicereus undatus
Lalb_Chr02g0144431 Lupinus albus
Lalb_Chr06g0164511 Lupinus albus
Lj1C439T2 Lonicera japonica
Lj1g0025246 Lotus japonicus
Lj2A367T24 Lonicera japonica
Lj5g0002450 Lotus japonicus
Lju124A26G39 Lonicera japonica
Lsat_1_v5_gn_2_101200 Lactuca sativa
Lsat_1_v5_gn_5_163100 Lactuca sativa
Lsat_1_v5_gn_7_113780 Lactuca sativa
Manes.03G090428 Manihot esculenta
Manes.09G034500 Manihot esculenta
Mapoly0009s0039 Marchantia polymorpha
MBI01_g01349_MAGBIO Magnolia biondii
MBI04_g46411_MAGBIO Magnolia biondii
MCO09G333 Micromonas commoda
MD03G1016900 Malus domestica
MD11G1017500 Malus domestica
MD12G1059300 Malus domestica
Medtr0042s0070 Medicago truncatula
Medtr1g116900 Medicago truncatula
Medtr7g093090 Medicago truncatula
MELO3C015669.2 Cucumis melo
Migut.J01828 Erythranthe guttata
Migut.N02284 Erythranthe guttata
MSTRG.17563 Avicennia marina
MSTRG.19901 Avicennia marina
Nitab4.5_0000105g0050 Nicotiana tabacum
Nitab4.5_0000324g0110 Nicotiana tabacum
Nitab4.5_0001146g0180 Nicotiana tabacum
Nitab4.5_0001538g0050 Nicotiana tabacum
Nitab4.5_0002689g0030 Nicotiana tabacum
Nitab4.5_0007607g0050 Nicotiana tabacum
Nn2g15656 Nelumbo nucifera
Nn7g36019 Nelumbo nucifera
Oeu034262.1 Olea europaea
Oeu061754.1 Olea europaea
Os02g0194300 Oryza sativa ssp. japonica
Os06g0618000 Oryza sativa ssp. japonica
Os08g0510900 Oryza sativa ssp. japonica
Peaxi162Scf00003g04331 Petunia axillaris
Peaxi162Scf00062g01319 Petunia axillaris
Peaxi162Scf00226g00933 Petunia axillaris
Peaxi162Scf00258g00424 Petunia axillaris
Peaxi162Scf00403g00111 Petunia axillaris
Peaxi162Scf01514g00031 Petunia axillaris
PGR119G1859 Punica granatum
PGSC0003DMG400011413 Solanum tuberosum
PGSC0003DMG400014453 Solanum tuberosum
PGSC0003DMG400032236 Solanum tuberosum
PGSC0003DMG400034787 Solanum tuberosum
Phvul.001G141800 Phaseolus vulgaris
Phvul.007G003000 Phaseolus vulgaris
Potri.003G212600 Populus trichocarpa
Potri.016G046802 Populus trichocarpa
Potri.T028032 Populus trichocarpa
Pp3c27_130 Physcomitrium patens
PRCOL_00006383 Prasinoderma coloniale
Prupe.6G015300 Prunus persica
Prupe.7G076100 Prunus persica
Psat3g068840 Pisum sativum
Psat5g188240 Pisum sativum
Psat6g242760 Pisum sativum
PSO210G6311 Papaver somniferum
PSO339G1807 Papaver somniferum
PSO339G6138 Papaver somniferum
PSO384G1245 Papaver somniferum
PSO384G1881 Papaver somniferum
PSO675G1369 Papaver somniferum
PSO675G6135 Papaver somniferum
QL01p009125 Quercus lobata
QL01p009158 Quercus lobata
QL07p023587 Quercus lobata
RcHm_v2.0_Chr3g0479811 Rosa chinensis
RcHm_v2.0_Chr5g0080471 Rosa chinensis
RcHm_v2.0_Chr5g0080481 Rosa chinensis
RcHm_v2.0_Chr5g0080501 Rosa chinensis
Rhsim03G0006500 Rhododendron simsii
Rhsim04G0097200 Rhododendron simsii
RhsimUnG0213000 Rhododendron simsii
Sabra03G0155600 Salix brachista
Sabra03G0158800 Salix brachista
Sabra16G0050700 Salix brachista
SalBow2G3639 Salvia bowleyana
SalBow6G2044 Salvia bowleyana
SalBow6G7134 Salvia bowleyana
Sc16g0011930 Simmondsia chinensis
Sc19g0007000 Simmondsia chinensis
Sed0013592 Sechium edule
Sed0018661 Sechium edule
SEGI_07103 Sequoiadendron giganteum
SEGI_07256 Sequoiadendron giganteum
SEGI_23749 Sequoiadendron giganteum
SEGI_40224 Sequoiadendron giganteum
SGA_v2.0_scaffold105G30484 Striga asiatica
SGA_v2.0_scaffold69G23070 Striga asiatica
SHI30531 Sapria himalayana
SMO361G0146 Selaginella moellendorffii
SMO361G0706 Selaginella moellendorffii
Solyc01g006460.3 Solanum lycopersicum
Solyc04g025510.4 Solanum lycopersicum
Solyc10g078730.2 Solanum lycopersicum
Solyc12g041890.2 Solanum lycopersicum
Sopen01g002450 Solanum pennellii
Sopen04g012600 Solanum pennellii
Sopen10g029350 Solanum pennellii
Sopen12g020660 Solanum pennellii
Sp1g37860 Schrenkiella parvula
Sp3g18780 Schrenkiella parvula
TAR623G1535 Trochodendron aralioides
TAR633G2514 Trochodendron aralioides
TAR636G0698 Trochodendron aralioides
THA.LOC104816914 Tarenaya hassleriana
Thecc.05G170500 Theobroma cacao
Thecc.09G218900 Theobroma cacao
Thhalv10011541m.g Eutrema salsugineum
Thhalv10022149m.g Eutrema salsugineum
TPR.G18233 Trifolium pratense
TPR.G34231 Trifolium pratense
TPR.G8891 Trifolium pratense
TWI34G1978 Tripterygium wilfordii
TWI60G1012 Tripterygium wilfordii
unitig_27.g24932 Utricularia gibba
unitig_699.g19446 Utricularia gibba
vmacro07914 Vaccinium macrocarpon
vmacro09113 Vaccinium macrocarpon
vmacro12699 Vaccinium macrocarpon
VMungo0720G2269 Vigna mungo
VMungo1383G1973 Vigna mungo
Zm00001eb206070 Zea mays
Zm00001eb275740 Zea mays
Zm00001eb293920 Zea mays
Zm00001eb313840 Zea mays
Zm00001eb350520 Zea mays

User provided reference genes

Program Settings