Gene: AT3G20760

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G20760
  • Transcript Identifier AT3G20760.1
  • Gene Type Coding gene
  • Location Chr3 : 7257187-7258891 : negative

Gene Family Information

  • ID HOM05D002402
  • #Genes/#Species 282/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G20760.1
  • uniprot F4JET1

Descriptions

  • Description Nse4, component of Smc5/6 DNA repair complex
  • Computational description Nse4, component of Smc5/6 DNA repair complex; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: sperm cell, cotyledon; CONTAINS InterPro DOMAIN/s: Nse4 (InterPro:IPR014854); BEST Arabidopsis thaliana protein match is: Nse4, component of Smc5/6 DNA repair complex (TAIR:AT1G51130.1); Has 305 Blast hits to 304 proteins in 129 species: Archae - 0; Bacteria - 2; Metazoa - 89; Fungi - 122; Plants - 76; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006281
IEA
GOA DatabaseDNA repair
GO:0006281
IBA
Gene OntologyDNA repair1
GO:0006281
IEA
InterProDNA repair
GO:0006310
IEA
GOA DatabaseDNA recombination
GO:0006974
IEA
GOA Databasecellular response to DNA damage stimulus

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003674
ND
Gene Ontologymolecular_function

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
ISM, IBA
Gene Ontologynucleus1
GO:0005634
IEA
InterPronucleus
GO:0030915
IEA
GOA DatabaseSmc5-Smc6 complex
GO:0030915
IBA
Gene OntologySmc5-Smc6 complex1
GO:0030915
IEA
InterProSmc5-Smc6 complex

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR014854 Non-structural maintenance of chromosome element 4, C-terminal
IPR027786 Nse4/EID family
Mapman id Description
14.3.6.2.1 DNA damage response.homologous recombination repair (HR).Smc5-Smc6 complex.NSE1-NSE3-NSE4 subcomplex.Kleisin-like bridging component NSE4