Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p23050 Brassica napus
A03p35980 Brassica napus
A05p39620 Brassica napus
A07p26940 Brassica napus
A07p26950 Brassica napus
A07p44760 Brassica napus
Aa31LG4G1240 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.5139 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.5291 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.5306 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.5318 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.637 Anthoceros agrestis
Actinidia01683 Actinidia chinensis
Actinidia03623 Actinidia chinensis
Ah.15g096650 Amaranthus hybridus
AL1G60500 Arabidopsis lyrata
AL2G40450 Arabidopsis lyrata
AL8G24280 Arabidopsis lyrata
Aqoxy1G00299 Aquilegia oxysepala
Aqoxy7G03651 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.6Y08YU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.7S1CUY Arachis hypogaea
AT1G52325 Arabidopsis thaliana
AT1G80930 Arabidopsis thaliana
ATR0693G031 Amborella trichopoda
Atru.chr5.3018 Acer truncatum
AUR62009704 Chenopodium quinoa
AUR62012616 Chenopodium quinoa
AUR62036242 Chenopodium quinoa
BcaB01g02547 Brassica carinata
BcaB02g07238 Brassica carinata
BcaB03g11602 Brassica carinata
BcaB03g11603 Brassica carinata
BcaB05g25214 Brassica carinata
BcaC03g15917 Brassica carinata
BcaC05g29517 Brassica carinata
BcaC05g29668 Brassica carinata
BcaC05g29694 Brassica carinata
BcaC08g45348 Brassica carinata
BcaC08g47534 Brassica carinata
BolC2t09684H Brassica oleracea
BolC3t16630H Brassica oleracea
BolC5t34514H Brassica oleracea
BolC6t38127H Brassica oleracea
BolC6t38411H Brassica oleracea
BolC6t40374H Brassica oleracea
BraA02t07303Z Brassica rapa
BraA03t12770Z Brassica rapa
BraA05t22743Z Brassica rapa
BraA07t30339Z Brassica rapa
BraA07t31984Z Brassica rapa
C02p36800 Brassica napus
C05p58640 Brassica napus
C06p29620 Brassica napus
C06p32910 Brassica napus
C06p53580 Brassica napus
CAN.G1126.12 Capsicum annuum
CAN.G137.2 Capsicum annuum
CAN.G164.8 Capsicum annuum
CAN.G504.36 Capsicum annuum
CAN.G504.73 Capsicum annuum
CANSAT64G2151 Cannabis sativa
CARHR042450 Cardamine hirsuta
CARHR072930 Cardamine hirsuta
CARHR073540 Cardamine hirsuta
CARHR150100 Cardamine hirsuta
Carub.0001s4130 Capsella rubella
Carub.0002s2661 Capsella rubella
Carub.0005s1138 Capsella rubella
Carub.0008s0985 Capsella rubella
Carub.0008s1026 Capsella rubella
Ca_26289_v3 Cicer arietinum L.
CBR_g25966 Chara braunii
Cc01_g04700 Coffea canephora
Cc09_g03580 Coffea canephora
CDE07G0369 Ceratophyllum demersum
Cfa009729 Carpinus fangiana
Cfa024861 Carpinus fangiana
Ciclev10027820m.g Citrus clementina
CiPaw.13G163900 Carya illinoinensis
CiPaw.14G121200 Carya illinoinensis
ClCG02G023410 Citrullus lanatus
COL.COLO4_22130 Corchorus olitorius
COL.COLO4_22131 Corchorus olitorius
COL.COLO4_26808 Corchorus olitorius
COL.COLO4_31193 Corchorus olitorius
Cpa.g.c40106 Carica papaya
Cpa.g.sc54.54 Carica papaya
Cre06.g259800 Chlamydomonas reinhardtii
CsaV3_4G024100 Cucumis sativus L.
CSS0012777 Camellia sinensis var. sinensis
CSS0015073 Camellia sinensis var. sinensis
CSS0020103 Camellia sinensis var. sinensis
CSS0035864 Camellia sinensis var. sinensis
DCAR_011585 Daucus carota
Dinv08040 Davidia involucrata
Dinv36287 Davidia involucrata
Duzib187G0047 Durio zibethinus
Duzib212G0403 Durio zibethinus
ECA233G5435 Erigeron canadensis
ECA238G4064 Erigeron canadensis
EL10Ac3g05700 Beta vulgaris
EL10Ac3g05714 Beta vulgaris
EL10Ac7g15883 Beta vulgaris
Eucgr.J00793 Eucalyptus grandis
Eucgr.J01046 Eucalyptus grandis
FAN11G1601 Fragaria x ananassa
FAN11G2216 Fragaria x ananassa
FAN16G0907 Fragaria x ananassa
FAN16G2660 Fragaria x ananassa
FAN21G1898 Fragaria x ananassa
FAN21G3852 Fragaria x ananassa
FAN21G4049 Fragaria x ananassa
FAN25G2780 Fragaria x ananassa
FAN25G2878 Fragaria x ananassa
FAN25G3119 Fragaria x ananassa
FvH4_3g01450 Fragaria vesca
FvH4_3g43230 Fragaria vesca
FvH4_3g43240 Fragaria vesca
Glyma.07G198266 Glycine max
Glyma.07G198332 Glycine max
Glyma.08G302400 Glycine max
Glyma.13G178100 Glycine max
Glyma.18G117500 Glycine max
Gohir.A03G088400 Gossypium hirsutum
Gohir.D02G110100 Gossypium hirsutum
Gohir.D10G107150 Gossypium hirsutum
Gorai.005G123200 Gossypium raimondii
Gorai.010G204600 Gossypium raimondii
Gorai.011G117500 Gossypium raimondii
HanXRQChr08g0218791 Helianthus annuus
HanXRQChr08g0219401 Helianthus annuus
HanXRQChr08g0219441 Helianthus annuus
HanXRQChr08g0219451 Helianthus annuus
HanXRQChr12g0370361 Helianthus annuus
Haze_23081 Corylus avellana
Hma1.2p1_0045F.1_g026480 Hydrangea macrophylla
Hma1.2p1_0045F.1_g026540 Hydrangea macrophylla
Hma1.2p1_0045F.1_g026545 Hydrangea macrophylla
Hma1.2p1_0045F.1_g026550 Hydrangea macrophylla
Hma1.2p1_0728F.1_g209280 Hydrangea macrophylla
Hma1.2p1_1553F.1_g290290 Hydrangea macrophylla
Hma1.2p1_1797F.1_g302825 Hydrangea macrophylla
HPP92_016402 Vanilla planifolia
Hund22070 Selenicereus undatus
Lalb_Chr18g0061001 Lupinus albus
Lalb_Chr20g0123641 Lupinus albus
Lj2A647T22 Lonicera japonica
Lj2A648T13 Lonicera japonica
Lj2C647T6 Lonicera japonica
Lj2g0026963 Lotus japonicus
Lj2P647T20 Lonicera japonica
Lj5g0028174 Lotus japonicus
Lj6g0001394 Lotus japonicus
Lj6g0014469 Lotus japonicus
Lj9A644G46 Lonicera japonica
Lj9A644T52 Lonicera japonica
LjContig00141g0022467 Lotus japonicus
Lsat_1_v5_gn_2_85500 Lactuca sativa
Lsat_1_v5_gn_8_21361 Lactuca sativa
Lsat_1_v5_gn_8_21381 Lactuca sativa
Lsat_1_v5_gn_8_42141 Lactuca sativa
Lsat_1_v5_gn_8_42161 Lactuca sativa
Manes.05G146001 Manihot esculenta
Manes.07G069233 Manihot esculenta
Manes.08G094900 Manihot esculenta
Manes.09G108700 Manihot esculenta
Mapoly0072s0074 Marchantia polymorpha
MBI15_g08972_MAGBIO Magnolia biondii
MBI15_g40105_MAGBIO Magnolia biondii
MBI15_g46542_MAGBIO Magnolia biondii
MCO02G440 Micromonas commoda
MD03G1023500 Malus domestica
MD11G1028600 Malus domestica
Medtr3g021000 Medicago truncatula
Medtr3g434840 Medicago truncatula
Medtr5g096330 Medicago truncatula
Medtr7g093340 Medicago truncatula
Medtr7g093510 Medicago truncatula
MELO3C004695.2 Cucumis melo
MELO3C014611.2 Cucumis melo
Migut.A00214 Erythranthe guttata
Migut.I00549 Erythranthe guttata
Migut.J00075 Erythranthe guttata
Migut.J00785 Erythranthe guttata
Migut.N02302 Erythranthe guttata
MSTRG.17579 Avicennia marina
Nitab4.5_0000244g0380 Nicotiana tabacum
Nitab4.5_0000244g0400 Nicotiana tabacum
Nitab4.5_0000556g0130 Nicotiana tabacum
Nitab4.5_0001477g0090 Nicotiana tabacum
Nitab4.5_0002778g0020 Nicotiana tabacum
Nitab4.5_0005609g0030 Nicotiana tabacum
Nn2g12157 Nelumbo nucifera
Oeu035712.1 Olea europaea
Oeu036924.1 Olea europaea
Oeu055804.1 Olea europaea
Os11g0151600 Oryza sativa ssp. japonica
Os12g0256300 Oryza sativa ssp. japonica
Os12g0273980 Oryza sativa ssp. japonica
Peaxi162Scf00000g00752 Petunia axillaris
Peaxi162Scf00016g03343 Petunia axillaris
Peaxi162Scf00045g00141 Petunia axillaris
PGR119G1899 Punica granatum
PGSC0003DMG400017844 Solanum tuberosum
PGSC0003DMG400022902 Solanum tuberosum
PGSC0003DMG400027846 Solanum tuberosum
Phvul.003G039000 Phaseolus vulgaris
Phvul.006G027300 Phaseolus vulgaris
Phvul.006G029300 Phaseolus vulgaris
Phvul.006G191000 Phaseolus vulgaris
Potri.016G121100 Populus trichocarpa
Pp3c24_6660 Physcomitrium patens
Pp3c8_14780 Physcomitrium patens
PRCOL_00000882 Prasinoderma coloniale
Prupe.6G022700 Prunus persica
Psat0s3534g0040 Pisum sativum
PSO063G5000 Papaver somniferum
PSO675G8719 Papaver somniferum
PSO732G0266 Papaver somniferum
PSO732G0489 Papaver somniferum
QL01p005459 Quercus lobata
QL01p005489 Quercus lobata
QL01p005503 Quercus lobata
QL01p005537 Quercus lobata
RcHm_v2.0_Chr5g0002291 Rosa chinensis
RcHm_v2.0_Chr5g0077281 Rosa chinensis
RcHm_v2.0_Chr5g0077291 Rosa chinensis
RcHm_v2.0_Chr6g0269541 Rosa chinensis
Rhsim01G0190300 Rhododendron simsii
Rhsim01G0190700 Rhododendron simsii
Rhsim01G0194600 Rhododendron simsii
Sabra16G0117000 Salix brachista
SalBow3G0072 Salvia bowleyana
SalBow5G5455 Salvia bowleyana
Sc09g0000540 Simmondsia chinensis
Sed0019733 Sechium edule
Sed0022440 Sechium edule
Sed0023269 Sechium edule
SEGI_07881 Sequoiadendron giganteum
SEGI_28122 Sequoiadendron giganteum
SGA_v2.0_scaffold3G01533 Striga asiatica
SGA_v2.0_scaffold3G01551 Striga asiatica
SGA_v2.0_scaffold55G19795 Striga asiatica
SGA_v2.0_scaffold98G29410 Striga asiatica
SGA_v2.0_scaffold98G29429 Striga asiatica
SHI32650 Sapria himalayana
SHI32656 Sapria himalayana
SMO118G0258 Selaginella moellendorffii
SMO119G0042 Selaginella moellendorffii
Solyc03g116050.1 Solanum lycopersicum
Solyc03g122110.1 Solanum lycopersicum
Solyc04g079920.4 Solanum lycopersicum
Solyc08g005190.4 Solanum lycopersicum
Sopen03g035040 Solanum pennellii
Sopen03g040900 Solanum pennellii
Sopen04g033500 Solanum pennellii
Sopen08g001210 Solanum pennellii
Sp3g07760 Schrenkiella parvula
Sp5g34810 Schrenkiella parvula
Sp6g06350 Schrenkiella parvula
TAR633G0443 Trochodendron aralioides
TAR636G2523 Trochodendron aralioides
THA.LOC104813591 Tarenaya hassleriana
Thecc.01G386000 Theobroma cacao
Thhalv10018086m.g Eutrema salsugineum
Thhalv10020518m.g Eutrema salsugineum
Thhalv10023142m.g Eutrema salsugineum
TPR.G11471 Trifolium pratense
TPR.G15568 Trifolium pratense
TPR.G18230 Trifolium pratense
TPR.G18254 Trifolium pratense
TPR.G35307 Trifolium pratense
TPR.G8496 Trifolium pratense
TWI53G1590 Tripterygium wilfordii
TWI77G0175 Tripterygium wilfordii
unitig_27.g24988 Utricularia gibba
unitig_699.g19131 Utricularia gibba
vmacro09706 Vaccinium macrocarpon
vmacro22612 Vaccinium macrocarpon
VMungo0540G0651 Vigna mungo
VMungo0540G1985 Vigna mungo
Zm00001eb410000 Zea mays

User provided reference genes

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