Gene: Solyc04g079920.4

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc04g079920.4
  • Transcript Identifier Solyc04g079920.4.1
  • Gene Type Coding gene
  • Location SL4.0ch04 : 62222699-62226853 : positive

Gene Family Information

  • ID HOM05D002396
  • #Genes/#Species 283/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc04g079920.4.1
  • uniprot A0A3Q7H2L6
  • gene_id Solyc04g079920

Descriptions

  • Description Pre-mRNA-splicing factor CWC22-like protein (AHRD V3.3 *** A0A2G2ZS42_CAPAN)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006417
IEA
GOA Databaseregulation of translation
GO:0000398
IBA
GOA DatabasemRNA splicing, via spliceosome

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003723
IBA
IEA
GOA DatabaseRNA binding
GO:0003723
IEA
InterProRNA binding
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0071013
IBA
GOA Databasecatalytic step 2 spliceosome
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT1G80930
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT1G80930

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR003891 Initiation factor eIF-4 gamma, MA3
IPR016024 Armadillo-type fold
IPR003890 MIF4G-like, type 3
IPR016021 MIF4G-like domain superfamily
Mapman id Description
35.1 not assigned.annotated