Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p11200 Brassica napus
A01p39960 Brassica napus
A03p38300 Brassica napus
A03p51760 Brassica napus
A04p27860 Brassica napus
A05p35750 Brassica napus
A08p14270 Brassica napus
Aa31LG10G9510 Aethionema arabicum
Aa31LG10G9520 Aethionema arabicum
Aa31LG6G1920 Aethionema arabicum
Aa31LG8G820 Aethionema arabicum
Aa31LG8G9750 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_340.197 Anthoceros agrestis
Actinidia03518 Actinidia chinensis
Actinidia16524 Actinidia chinensis
Actinidia23037 Actinidia chinensis
Actinidia23038 Actinidia chinensis
Actinidia23039 Actinidia chinensis
Actinidia37461 Actinidia chinensis
Ah.06g188600 Amaranthus hybridus
AL1G67390 Arabidopsis lyrata
AL3G25560 Arabidopsis lyrata
AL3G25580 Arabidopsis lyrata
AL3G25700 Arabidopsis lyrata
AL486U10010 Arabidopsis lyrata
AL6G16410 Arabidopsis lyrata
Aqoxy1G03050 Aquilegia oxysepala
Aqoxy1G04048 Aquilegia oxysepala
Aqoxy7G00895 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.H03KUW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.I7HRAK Arachis hypogaea
AT3G13640 Arabidopsis thaliana
AT4G19210 Arabidopsis thaliana
AT4G30300 Arabidopsis thaliana
ATR0743G270 Amborella trichopoda
ATR0950G008 Amborella trichopoda
Atru.chr8.2625 Acer truncatum
AUR62004172 Chenopodium quinoa
AUR62004173 Chenopodium quinoa
AUR62010433 Chenopodium quinoa
AUR62013671 Chenopodium quinoa
AUR62013672 Chenopodium quinoa
AUR62016789 Chenopodium quinoa
BcaB02g06528 Brassica carinata
BcaB02g10068 Brassica carinata
BcaB04g18778 Brassica carinata
BcaC01g00605 Brassica carinata
BcaC01g03985 Brassica carinata
BcaC03g13666 Brassica carinata
BcaC05g26768 Brassica carinata
BcaC06g30612 Brassica carinata
BcaC06g35208 Brassica carinata
BcaC06g36077 Brassica carinata
BcaC09g48336 Brassica carinata
BcaC09g48339 Brassica carinata
BcaC09g50391 Brassica carinata
BcaC09g51425 Brassica carinata
BcaNung01798 Brassica carinata
BcaNung03073 Brassica carinata
BNapus_Darmor_BZH_scaffold_38p02590 Brassica napus
BolC1t01298H Brassica oleracea
BolC1t02547H Brassica oleracea
BolC1t02548H Brassica oleracea
BolC1t05056H Brassica oleracea
BolC1t05082H Brassica oleracea
BolC1t05087H Brassica oleracea
BolC3t16914H Brassica oleracea
BolC3t20464H Brassica oleracea
BolC4t28016H Brassica oleracea
BolC5t31345H Brassica oleracea
BolC5t34085H Brassica oleracea
BolC7t41229H Brassica oleracea
BolC7t42376H Brassica oleracea
BolC7t45532H Brassica oleracea
BraA01t01066Z Brassica rapa
BraA01t04037Z Brassica rapa
BraA03t12983Z Brassica rapa
BraA03t14266Z Brassica rapa
BraA04t18278Z Brassica rapa
BraA05t22382Z Brassica rapa
BraA08t33420Z Brassica rapa
C01p13240 Brassica napus
C01p26020 Brassica napus
C01p51100 Brassica napus
C01p51190 Brassica napus
C01p51300 Brassica napus
C01p51310 Brassica napus
C01p51440 Brassica napus
C03p46500 Brassica napus
C03p81850 Brassica napus
C04p65360 Brassica napus
C05p54200 Brassica napus
C07p08110 Brassica napus
C07p08120 Brassica napus
C07p18650 Brassica napus
C07p50300 Brassica napus
CAN.G278.8 Capsicum annuum
CAN.G998.15 Capsicum annuum
CANSAT80G1022 Cannabis sativa
CARHR088050 Cardamine hirsuta
CARHR088060 Cardamine hirsuta
CARHR226120 Cardamine hirsuta
Carub.0003s1309 Capsella rubella
Carub.0003s1312 Capsella rubella
Carub.0003s2282 Capsella rubella
Carub.0007s2192 Capsella rubella
Ca_25047_v3 Cicer arietinum L.
CBR_g23341 Chara braunii
Cc08_g05870 Coffea canephora
CDE04G3391 Ceratophyllum demersum
CDE07G0265 Ceratophyllum demersum
Cfa012297 Carpinus fangiana
Cfa026567 Carpinus fangiana
Ciclev10011325m.g Citrus clementina
CiPaw.11G074500 Carya illinoinensis
CiPaw.12G054900 Carya illinoinensis
ClCG11G016090 Citrullus lanatus
COL.COLO4_10679 Corchorus olitorius
Cpa.g.c43057 Carica papaya
Cpa.g.sc17.25 Carica papaya
Cpa.g.sc352.3 Carica papaya
Cre09.g409350 Chlamydomonas reinhardtii
CsaV3_4G014950 Cucumis sativus L.
CsaV3_4G014960 Cucumis sativus L.
CsaV3_UNG237510 Cucumis sativus L.
CSS0002750 Camellia sinensis var. sinensis
DCAR_019007 Daucus carota
Dinv19755 Davidia involucrata
Dinv32024 Davidia involucrata
Duzib205G1116 Durio zibethinus
ECA232G0776 Erigeron canadensis
ECA232G5011 Erigeron canadensis
ECA233G0929 Erigeron canadensis
ECA234G4248 Erigeron canadensis
ECA247G1393 Erigeron canadensis
ECA247G2387 Erigeron canadensis
ECA248G1779 Erigeron canadensis
EL10Ac1g00844 Beta vulgaris
EL10Ac9g21679 Beta vulgaris
Eucgr.D02563 Eucalyptus grandis
FAN11G2547 Fragaria x ananassa
FAN16G3071 Fragaria x ananassa
FAN16G3364 Fragaria x ananassa
FAN20G0482 Fragaria x ananassa
FAN21G1481 Fragaria x ananassa
FAN25G3105 Fragaria x ananassa
FAN25G3557 Fragaria x ananassa
FvH4_2g37360 Fragaria vesca
FvH4_3g03280 Fragaria vesca
Glyma.11G090900 Glycine max
Gohir.A08G149100 Gossypium hirsutum
Gohir.D08G170100 Gossypium hirsutum
Gorai.004G177600 Gossypium raimondii
GSVIVG01036876001 Vitis vinifera
HanXRQChr01g0005661 Helianthus annuus
HanXRQChr08g0227501 Helianthus annuus
HanXRQChr08g0227511 Helianthus annuus
HanXRQChr08g0233701 Helianthus annuus
HanXRQChr10g0319721 Helianthus annuus
HanXRQChr11g0320321 Helianthus annuus
HanXRQChr16g0525061 Helianthus annuus
Haze_08431 Corylus avellana
Haze_26464 Corylus avellana
Hma1.2p1_0353F.1_g133200 Hydrangea macrophylla
Hma1.2p1_0839F.1_g226330 Hydrangea macrophylla
Hund17042 Selenicereus undatus
Hund19902 Selenicereus undatus
Hund26073 Selenicereus undatus
Lalb_Chr05g0215111 Lupinus albus
Lalb_Chr09g0325011 Lupinus albus
Lalb_Chr16g0380391 Lupinus albus
Lj2g0003122 Lotus japonicus
Lj2g0021457 Lotus japonicus
Lj2g0026942 Lotus japonicus
Lj4g0027217 Lotus japonicus
Lj7A560G40 Lonicera japonica
Lj7A756G24 Lonicera japonica
Lj8C8T5 Lonicera japonica
Lsat_1_v5_gn_6_17181 Lactuca sativa
Manes.04G077300 Manihot esculenta
Manes.04G077500 Manihot esculenta
Mapoly0081s0022 Marchantia polymorpha
MBI13_g01655_MAGBIO Magnolia biondii
MBI16_g27591_MAGBIO Magnolia biondii
MBI16_g27592_MAGBIO Magnolia biondii
MCO06G275 Micromonas commoda
MD08G1001700 Malus domestica
MD09G1160000 Malus domestica
MD09G1160100 Malus domestica
MD15G1001000 Malus domestica
MD17G1145900 Malus domestica
Medtr1g024860 Medicago truncatula
Medtr1g025075 Medicago truncatula
Medtr1g114170 Medicago truncatula
Medtr4g007890 Medicago truncatula
MELO3C010525.2 Cucumis melo
Migut.A00525 Erythranthe guttata
Migut.N01668 Erythranthe guttata
MSTRG.11862 Avicennia marina
MSTRG.25745 Avicennia marina
MSTRG.28112 Avicennia marina
Nitab4.5_0000030g0620 Nicotiana tabacum
Nitab4.5_0002871g0020 Nicotiana tabacum
Nn1g09332 Nelumbo nucifera
Nn7g37983 Nelumbo nucifera
Oeu028425.1 Olea europaea
Oeu033615.1 Olea europaea
Oeu036052.1 Olea europaea
Os02g0282900 Oryza sativa ssp. japonica
Os11g0546000 Oryza sativa ssp. japonica
Peaxi162Scf00193g00044 Petunia axillaris
PGR042G3035 Punica granatum
PGSC0003DMG400019889 Solanum tuberosum
Phvul.002G121800 Phaseolus vulgaris
Potri.003G045700 Populus trichocarpa
Potri.004G235900 Populus trichocarpa
Pp3c16_8950 Physcomitrium patens
Pp3c25_1990 Physcomitrium patens
PRCOL_00001280 Prasinoderma coloniale
PRCOL_00005241 Prasinoderma coloniale
Prupe.1G366500 Prunus persica
Prupe.3G017900 Prunus persica
Prupe.3G018600 Prunus persica
Prupe.3G018700 Prunus persica
Prupe.3G046700 Prunus persica
Psat0s2505g0040 Pisum sativum
Psat3g109240 Pisum sativum
Psat3g136440 Pisum sativum
Psat4g095200 Pisum sativum
Psat4g095240 Pisum sativum
Psat7g260400 Pisum sativum
PSO210G0678 Papaver somniferum
PSO210G5635 Papaver somniferum
PSO421G0307 Papaver somniferum
PSO502G0016 Papaver somniferum
PSO675G1104 Papaver somniferum
PSO675G2809 Papaver somniferum
QL12p004348 Quercus lobata
QL12p004365 Quercus lobata
RcHm_v2.0_Chr5g0005021 Rosa chinensis
RcHm_v2.0_Chr6g0304351 Rosa chinensis
RcHm_v2.0_Chr6g0304361 Rosa chinensis
Rhsim03G0068100 Rhododendron simsii
Rhsim03G0086700 Rhododendron simsii
Rhsim08G0077000 Rhododendron simsii
Sabra01G0180300 Salix brachista
Sabra11G0075800 Salix brachista
SalBow4G2012 Salvia bowleyana
Sc02g0002730 Simmondsia chinensis
Sed0019206 Sechium edule
SEGI_14716 Sequoiadendron giganteum
SEGI_21622 Sequoiadendron giganteum
SGA_v2.0_scaffold280G46872 Striga asiatica
SGA_v2.0_scaffold89G27373 Striga asiatica
SGA_v2.0_scaffold96G29096 Striga asiatica
SGA_v2.0_scaffold96G29101 Striga asiatica
Solyc07g008340.4 Solanum lycopersicum
Solyc08g075360.3 Solanum lycopersicum
Sopen07g004230 Solanum pennellii
Sopen08g023990 Solanum pennellii
Sp3g11840 Schrenkiella parvula
Sp7g17930 Schrenkiella parvula
TAR626G1311 Trochodendron aralioides
TAR629G0431 Trochodendron aralioides
THA.LOC104806197 Tarenaya hassleriana
THA.LOC104811132 Tarenaya hassleriana
Thecc.03G319700 Theobroma cacao
Thhalv10002453m.g Eutrema salsugineum
Thhalv10013091m.g Eutrema salsugineum
Thhalv10024707m.g Eutrema salsugineum
TPR.G3357 Trifolium pratense
TPR.G35673 Trifolium pratense
TPR.G35680 Trifolium pratense
TPR.G6580 Trifolium pratense
TPR.G8993 Trifolium pratense
TWI32G0472 Tripterygium wilfordii
TWI60G1580 Tripterygium wilfordii
unitig_748.g7391 Utricularia gibba
vmacro18679 Vaccinium macrocarpon
vmacro20902 Vaccinium macrocarpon
vmacro21115 Vaccinium macrocarpon
VMungo1215G1802 Vigna mungo
Zm00001eb015910 Zea mays
Zm00001eb395250 Zea mays

User provided reference genes

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