Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p25040 Brassica napus
A03p31630 Brassica napus
A03p50140 Brassica napus
A05p28430 Brassica napus
A07p33310 Brassica napus
A08p28600 Brassica napus
Aa31LG5G1170 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.5215 Anthoceros agrestis
Actinidia08007 Actinidia chinensis
Actinidia28084 Actinidia chinensis
Actinidia33034 Actinidia chinensis
Actinidia33035 Actinidia chinensis
Ah.05g178930 Amaranthus hybridus
Ah.08g211620 Amaranthus hybridus
AL6G52005 Arabidopsis lyrata
Aqoxy5G01515 Aquilegia oxysepala
Aqoxy7G00567 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0D88S7 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.4VI0YY Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.E8X9SV Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LY1D8B Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.M8XQ0K Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PS19JV Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RPDR7L Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SI3K9E Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.X7MPPU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.X9H6X4 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YN16U1 Arachis hypogaea
AT4G01395 Arabidopsis thaliana
AT4G01400 Arabidopsis thaliana
ATR0057G041 Amborella trichopoda
ATR0697G195 Amborella trichopoda
Atru.chr5.768 Acer truncatum
Atru.chr5.770 Acer truncatum
AUR62005660 Chenopodium quinoa
AUR62028893 Chenopodium quinoa
AUR62040015 Chenopodium quinoa
AUR62042494 Chenopodium quinoa
BcaB05g23972 Brassica carinata
BcaB05g23974 Brassica carinata
BcaC01g02750 Brassica carinata
BcaC01g06822 Brassica carinata
BcaC03g16083 Brassica carinata
BolC1t03066H Brassica oleracea
BolC2t09861H Brassica oleracea
BolC3t16136H Brassica oleracea
BolC3t18356H Brassica oleracea
BraA01t02415Z Brassica rapa
BraA02t04916Z Brassica rapa
BraA02t08770Z Brassica rapa
BraA03t12339Z Brassica rapa
BraA03t14107Z Brassica rapa
BraA05t21723Z Brassica rapa
BraA10t42303Z Brassica rapa
C01p31270 Brassica napus
C02p38430 Brassica napus
C03p38630 Brassica napus
C03p60940 Brassica napus
CAN.G1209.27 Capsicum annuum
CAN.G1524.2 Capsicum annuum
CAN.G585.49 Capsicum annuum
CAN.G732.5 Capsicum annuum
CAN.G732.6 Capsicum annuum
CANSAT35G0902 Cannabis sativa
CANSAT56G4076 Cannabis sativa
CANSAT56G4423 Cannabis sativa
CARHR250280 Cardamine hirsuta
Carub.0003s2971 Capsella rubella
Carub.0006s3579 Capsella rubella
Carub.0006s3580 Capsella rubella
Ca_09546_v3 Cicer arietinum L.
Ca_09548_v3 Cicer arietinum L.
CBR_g6290 Chara braunii
Cc04_g09230 Coffea canephora
Cc06_g20470 Coffea canephora
CDE02G1610 Ceratophyllum demersum
CDE04G2286 Ceratophyllum demersum
CDE11G0036 Ceratophyllum demersum
Cfa003698 Carpinus fangiana
Cfa003734 Carpinus fangiana
Cfa025151 Carpinus fangiana
Ciclev10018998m.g Citrus clementina
Ciclev10023955m.g Citrus clementina
CiPaw.01G082500 Carya illinoinensis
CiPaw.15G076300 Carya illinoinensis
CiPaw.15G076400 Carya illinoinensis
ClCG06G002280 Citrullus lanatus
ClCG08G002040 Citrullus lanatus
COL.COLO4_23049 Corchorus olitorius
COL.COLO4_31148 Corchorus olitorius
Cpa.g.sc193.14 Carica papaya
Cpa.g.sc193.15 Carica papaya
Cre06.g287250 Chlamydomonas reinhardtii
CsaV3_6G002540 Cucumis sativus L.
CsaV3_6G008330 Cucumis sativus L.
CSS0012072 Camellia sinensis var. sinensis
CSS0028258 Camellia sinensis var. sinensis
CSS0033944 Camellia sinensis var. sinensis
DCAR_007693 Daucus carota
DCAR_022118 Daucus carota
DCAR_032252 Daucus carota
Dinv08357 Davidia involucrata
Dinv29276 Davidia involucrata
Dinv31611 Davidia involucrata
Dinv32645 Davidia involucrata
Duzib138G0669 Durio zibethinus
Duzib235G0384 Durio zibethinus
ECA234G2472 Erigeron canadensis
ECA234G3070 Erigeron canadensis
ECA246G0062 Erigeron canadensis
EL10Ac1g00185 Beta vulgaris
EL10Ac7g16621 Beta vulgaris
Eucgr.B02196 Eucalyptus grandis
Eucgr.H00258 Eucalyptus grandis
Eucgr.L01374 Eucalyptus grandis
FAN01G1237 Fragaria x ananassa
FAN01G3049 Fragaria x ananassa
FAN03G0415 Fragaria x ananassa
FAN03G1958 Fragaria x ananassa
FAN06G0076 Fragaria x ananassa
FAN06G0341 Fragaria x ananassa
FAN06G0379 Fragaria x ananassa
FAN06G1021 Fragaria x ananassa
FAN10G1672 Fragaria x ananassa
FAN10G4291 Fragaria x ananassa
FAN18G2005 Fragaria x ananassa
FAN19G0487 Fragaria x ananassa
FvH4_4g00571 Fragaria vesca
FvH4_5g29942 Fragaria vesca
FvH4_5g30911 Fragaria vesca
FvH4_7g17670 Fragaria vesca
FvH4_7g17740 Fragaria vesca
Glyma.03G261100 Glycine max
Glyma.03G261200 Glycine max
Glyma.19G260100 Glycine max
Gohir.A02G090600 Gossypium hirsutum
Gohir.A05G282701 Gossypium hirsutum
Gohir.A06G116700 Gossypium hirsutum
Gohir.A10G122550 Gossypium hirsutum
Gohir.A12G116801 Gossypium hirsutum
Gohir.A12G191400 Gossypium hirsutum
Gohir.D01G143333 Gossypium hirsutum
Gohir.D02G107800 Gossypium hirsutum
Gohir.D06G121400 Gossypium hirsutum
Gohir.D12G120300 Gossypium hirsutum
Gohir.D12G193700 Gossypium hirsutum
Gorai.002G176800 Gossypium raimondii
Gorai.005G122300 Gossypium raimondii
Gorai.008G131000 Gossypium raimondii
Gorai.010G141700 Gossypium raimondii
GSVIVG01027440001 Vitis vinifera
GSVIVG01027442001 Vitis vinifera
HanXRQChr05g0132281 Helianthus annuus
HanXRQChr13g0401531 Helianthus annuus
HanXRQChr15g0482971 Helianthus annuus
HanXRQChr16g0520851 Helianthus annuus
Haze_15735 Corylus avellana
Haze_15788 Corylus avellana
Hma1.2p1_0074F.1_g038740 Hydrangea macrophylla
HPP92_001559 Vanilla planifolia
Hund24710 Selenicereus undatus
Lalb_Chr15g0076531 Lupinus albus
Lalb_Chr15g0076551 Lupinus albus
Lalb_Chr18g0044711 Lupinus albus
Lj1g0027291 Lotus japonicus
Lj5g0026855 Lotus japonicus
Lj7E577T0 Lonicera japonica
Lj9A607T84 Lonicera japonica
Lsat_1_v5_gn_2_25021 Lactuca sativa
Lsat_1_v5_gn_3_17681 Lactuca sativa
Lsat_1_v5_gn_4_41841 Lactuca sativa
Lsat_1_v5_gn_6_26301 Lactuca sativa
Manes.01G239601 Manihot esculenta
Manes.01G239800 Manihot esculenta
Manes.05G016350 Manihot esculenta
Mapoly0151s0016 Marchantia polymorpha
MBI12_g09288_MAGBIO Magnolia biondii
MBI12_g14499_MAGBIO Magnolia biondii
MBI12_g48127_MAGBIO Magnolia biondii
MBI12_g48128_MAGBIO Magnolia biondii
MBI15_g16775_MAGBIO Magnolia biondii
MCO01G605 Micromonas commoda
MD01G1088700 Malus domestica
MD07G1159700 Malus domestica
MD07G1159800 Malus domestica
MD07G1159900 Malus domestica
Medtr7g118220 Medicago truncatula
Medtr7g118240 Medicago truncatula
MELO3C022305.2 Cucumis melo
MELO3C025032.2 Cucumis melo
Migut.B01922 Erythranthe guttata
Migut.D01237 Erythranthe guttata
MSTRG.12369 Avicennia marina
MSTRG.17383 Avicennia marina
Nitab4.5_0000755g0080 Nicotiana tabacum
Nitab4.5_0003682g0020 Nicotiana tabacum
Nitab4.5_0003729g0040 Nicotiana tabacum
Nitab4.5_0009345g0010 Nicotiana tabacum
Nn2g14439 Nelumbo nucifera
Oeu007915.2 Olea europaea
Oeu035561.1 Olea europaea
Os02g0456000 Oryza sativa ssp. japonica
Peaxi162Scf00003g00042 Petunia axillaris
Peaxi162Scf00028g00124 Petunia axillaris
PGR031G3302 Punica granatum
PGR102G0931 Punica granatum
PGSC0003DMG400026340 Solanum tuberosum
PGSC0003DMG401031089 Solanum tuberosum
PGSC0003DMG402031089 Solanum tuberosum
Phvul.009G254600 Phaseolus vulgaris
Phvul.009G257900 Phaseolus vulgaris
Phvul.009G258200 Phaseolus vulgaris
Potri.002G179600 Populus trichocarpa
Potri.014G105900 Populus trichocarpa
Pp3c17_20140 Physcomitrium patens
Pp3c1_40100 Physcomitrium patens
PRCOL_00002903 Prasinoderma coloniale
Prupe.2G092100 Prunus persica
Prupe.2G196300 Prunus persica
Prupe.2G197800 Prunus persica
Psat0s3525g0040 Pisum sativum
PSO017G7365 Papaver somniferum
PSO063G3400 Papaver somniferum
PSO170G3053 Papaver somniferum
PSO302G0149 Papaver somniferum
PSO339G3919 Papaver somniferum
PSO782G4179 Papaver somniferum
QL04p053388 Quercus lobata
QL08p047248 Quercus lobata
QL11p025959 Quercus lobata
RcHm_v2.0_Chr1g0334501 Rosa chinensis
RcHm_v2.0_Chr1g0334511 Rosa chinensis
RcHm_v2.0_Chr1g0361141 Rosa chinensis
Rhsim07G0007000 Rhododendron simsii
Sabra02G0134300 Salix brachista
Sabra14G0078000 Salix brachista
SalBow1G8542 Salvia bowleyana
SalBow3G2598 Salvia bowleyana
SalBow3G4592 Salvia bowleyana
Sc01g0002180 Simmondsia chinensis
Sc20g0005510 Simmondsia chinensis
Sed0000252 Sechium edule
Sed0015036 Sechium edule
SEGI_01969 Sequoiadendron giganteum
SEGI_23282 Sequoiadendron giganteum
SEGI_26155 Sequoiadendron giganteum
SGA_v2.0_scaffold12G06269 Striga asiatica
SGA_v2.0_scaffold6G03348 Striga asiatica
SHI03317 Sapria himalayana
SMO229G0015 Selaginella moellendorffii
SMO364G0412 Selaginella moellendorffii
Solyc07g056010.3 Solanum lycopersicum
Solyc11g068470.3 Solanum lycopersicum
Sopen07g029360 Solanum pennellii
Sopen11g027180 Solanum pennellii
Sp6g01350 Schrenkiella parvula
TAR629G2316 Trochodendron aralioides
TAR636G0053 Trochodendron aralioides
TAR636G2081 Trochodendron aralioides
TAR636G3264 Trochodendron aralioides
THA.LOC104815894 Tarenaya hassleriana
THA.LOC104825900 Tarenaya hassleriana
Thecc.01G333200 Theobroma cacao
Thecc.06G056400 Theobroma cacao
Thhalv10028369m.g Eutrema salsugineum
TPR.G19723 Trifolium pratense
TPR.G22870 Trifolium pratense
TPR.G25208 Trifolium pratense
TPR.G34125 Trifolium pratense
TPR.G4730 Trifolium pratense
TPR.G4775 Trifolium pratense
TPR.G9012 Trifolium pratense
TWI14G1409 Tripterygium wilfordii
TWI59G0940 Tripterygium wilfordii
unitig_21.g20038 Utricularia gibba
unitig_899.g15596 Utricularia gibba
vmacro13188 Vaccinium macrocarpon
vmacro13197 Vaccinium macrocarpon
vmacro23330 Vaccinium macrocarpon
VMungo1309G0406 Vigna mungo
VMungo1309G1994 Vigna mungo
VMungo1309G2974 Vigna mungo
Zm00001eb005370 Zea mays
Zm00001eb402340 Zea mays

User provided reference genes

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