Gene: AT4G01400

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT4G01400
  • Transcript Identifier AT4G01400.1
  • Gene Type Coding gene
  • Location Chr4 : 575843-577243 : negative

Gene Family Information

  • ID HOM05D002391
  • #Genes/#Species 284/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT4G01400.1
  • uniprot Q8LDU5

Descriptions

  • Description oligomeric golgi complex subunit-like protein
  • Computational description FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: COG4 transport (InterPro:IPR013167), Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G46100.1); Has 26268 Blast hits to 8959 proteins in 289 species: Archae - 0; Bacteria - 3; Metazoa - 247; Fungi - 222; Plants - 25350; Viruses - 0; Other Eukaryotes - 446 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000373
IMP
Gene OntologyGroup II intron splicing1
GO:0000963
IMP
Gene Ontologymitochondrial RNA processing1
GO:0032981
IMP
Gene Ontologymitochondrial respiratory chain complex I assembly1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003674
ND
Gene Ontologymolecular_function
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005739
IEA
GOA Databasemitochondrion
GO:0005739
IDA
ISM
Gene Ontologymitochondrion1
GO:0005829
HDA
Gene Ontologycytosol2

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002885 Pentatricopeptide repeat
IPR011990 Tetratricopeptide-like helical domain superfamily
Mapman id Description
16.11.4.2.1.12 RNA processing.organelle machinery.pre-mRNA splicing.mitochondrial RNA splicing.group-II intron splicing.splicing factor (MISF74)