Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p30410 Brassica napus
A04p30420 Brassica napus
A05p06860 Brassica napus
Aa31LG5G20080 Aethionema arabicum
Actinidia28014 Actinidia chinensis
AL4G36940 Arabidopsis lyrata
AL4G36950 Arabidopsis lyrata
Aqoxy3G04031 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1AG2TC Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.BG6DLE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CW7JQJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VML05H Arachis hypogaea
AT2G39518 Arabidopsis thaliana
AT2G39530 Arabidopsis thaliana
ATR0598G065 Amborella trichopoda
Atru.chr11.990 Acer truncatum
Atru.chr9.1589 Acer truncatum
BcaB02g09112 Brassica carinata
BcaB06g29094 Brassica carinata
BcaB06g29095 Brassica carinata
BcaC02g07395 Brassica carinata
BcaC02g07396 Brassica carinata
BcaC02g07399 Brassica carinata
BcaC02g12081 Brassica carinata
BolC4t22422H Brassica oleracea
BolC4t28238H Brassica oleracea
BolC4t28239H Brassica oleracea
BraA04t18467Z Brassica rapa
BraA05t19651Z Brassica rapa
C04p08120 Brassica napus
C04p67400 Brassica napus
C04p67410 Brassica napus
CAN.G786.13 Capsicum annuum
CANSAT01G2159 Cannabis sativa
CANSAT56G1523 Cannabis sativa
CANSAT56G2475 Cannabis sativa
CANSAT56G3432 Cannabis sativa
CANSAT56G3459 Cannabis sativa
CANSAT56G4227 Cannabis sativa
CANSAT56G4267 Cannabis sativa
CARHR134410 Cardamine hirsuta
Carub.0004s2160 Capsella rubella
Carub.0004s2161 Capsella rubella
Ca_07285_v3 Cicer arietinum L.
Cc02_g07930 Coffea canephora
Cc02_g07950 Coffea canephora
Cc04_g09120 Coffea canephora
Cc08_g03880 Coffea canephora
CDE07G1817 Ceratophyllum demersum
Cfa001486 Carpinus fangiana
Cfa020651 Carpinus fangiana
Cfa020652 Carpinus fangiana
Ciclev10024183m.g Citrus clementina
Ciclev10033896m.g Citrus clementina
ClCG04G012730 Citrullus lanatus
ClCG09G019900 Citrullus lanatus
ClCG09G019910 Citrullus lanatus
COL.COLO4_15014 Corchorus olitorius
COL.COLO4_32729 Corchorus olitorius
Cpa.g.sc361.1 Carica papaya
CsaV3_1G004870 Cucumis sativus L.
CsaV3_5G026540 Cucumis sativus L.
CsaV3_5G026550 Cucumis sativus L.
CsaV3_5G026560 Cucumis sativus L.
CsaV3_5G026570 Cucumis sativus L.
CSS0010618 Camellia sinensis var. sinensis
DCAR_010197 Daucus carota
DCAR_010198 Daucus carota
DCAR_010199 Daucus carota
DCAR_019173 Daucus carota
DCAR_023535 Daucus carota
DCAR_027633 Daucus carota
Dinv15677 Davidia involucrata
Dinv20493 Davidia involucrata
Dinv20495 Davidia involucrata
Dinv20547 Davidia involucrata
Dinv20549 Davidia involucrata
Dinv26005 Davidia involucrata
Dinv26006 Davidia involucrata
Dinv31454 Davidia involucrata
Duzib084G1428 Durio zibethinus
Duzib114G1053 Durio zibethinus
Duzib205G0226 Durio zibethinus
ECA233G2103 Erigeron canadensis
Eucgr.G02924 Eucalyptus grandis
FAN01G0260 Fragaria x ananassa
FAN01G1305 Fragaria x ananassa
FAN01G1489 Fragaria x ananassa
FAN01G2158 Fragaria x ananassa
FAN03G0063 Fragaria x ananassa
FAN03G1080 Fragaria x ananassa
FAN06G1604 Fragaria x ananassa
FAN06G1701 Fragaria x ananassa
FAN06G2263 Fragaria x ananassa
FAN06G2917 Fragaria x ananassa
FAN06G4888 Fragaria x ananassa
FAN08G0111 Fragaria x ananassa
FAN13G0088 Fragaria x ananassa
FAN13G1140 Fragaria x ananassa
FAN18G0936 Fragaria x ananassa
FAN18G2907 Fragaria x ananassa
FvH4_5g17860 Fragaria vesca
FvH4_5g17870 Fragaria vesca
FvH4_7g22200 Fragaria vesca
FvH4_7g22201 Fragaria vesca
FvH4_7g22210 Fragaria vesca
Glyma.02G092500 Glycine max
Glyma.02G092600 Glycine max
Glyma.07G107600 Glycine max
Glyma.09G170100 Glycine max
Glyma.16G219700 Glycine max
Glyma.18G289800 Glycine max
Glyma.18G289900 Glycine max
Glyma.18G290100 Glycine max
Gohir.A03G090932 Gossypium hirsutum
Gohir.A10G217500 Gossypium hirsutum
Gohir.D02G119100 Gossypium hirsutum
Gohir.D10G226300 Gossypium hirsutum
Gohir.D10G226600 Gossypium hirsutum
Gorai.005G134800 Gossypium raimondii
Gorai.011G257400 Gossypium raimondii
GSVIVG01016540001 Vitis vinifera
GSVIVG01016541001 Vitis vinifera
Haze_17054 Corylus avellana
Haze_17057 Corylus avellana
Haze_18932 Corylus avellana
Haze_18933 Corylus avellana
Haze_18955 Corylus avellana
Lalb_Chr10g0091701 Lupinus albus
Lalb_Chr17g0336171 Lupinus albus
Lj1g0005309 Lotus japonicus
Lj1g0007186 Lotus japonicus
Lj2g0004495 Lotus japonicus
Lsat_1_v5_gn_7_29321 Lactuca sativa
Lsat_1_v5_gn_8_34180 Lactuca sativa
Manes.14G174100 Manihot esculenta
Manes.17G090200 Manihot esculenta
MBI13_g21678_MAGBIO Magnolia biondii
MD01G1126800 Malus domestica
MD14G1241700 Malus domestica
Medtr6g073040 Medicago truncatula
Medtr6g073090 Medicago truncatula
Medtr7g024730 Medicago truncatula
Medtr7g024750 Medicago truncatula
MELO3C001930.2 Cucumis melo
MELO3C021643.2 Cucumis melo
MELO3C021645.2 Cucumis melo
MELO3C033579.2 Cucumis melo
MELO3C033722.2 Cucumis melo
MELO3C033723.2 Cucumis melo
Migut.E00564 Erythranthe guttata
Migut.E00565 Erythranthe guttata
Migut.F01502 Erythranthe guttata
Migut.F01504 Erythranthe guttata
Migut.F01505 Erythranthe guttata
Migut.I00570 Erythranthe guttata
MSTRG.8245 Avicennia marina
Nitab4.5_0000021g0380 Nicotiana tabacum
Nitab4.5_0000033g0360 Nicotiana tabacum
Nitab4.5_0000175g0210 Nicotiana tabacum
Nitab4.5_0000687g0160 Nicotiana tabacum
Nitab4.5_0000687g0190 Nicotiana tabacum
Nitab4.5_0000936g0090 Nicotiana tabacum
Nitab4.5_0001243g0010 Nicotiana tabacum
Nitab4.5_0001822g0030 Nicotiana tabacum
Nitab4.5_0001822g0040 Nicotiana tabacum
Nitab4.5_0002202g0040 Nicotiana tabacum
Nitab4.5_0002771g0030 Nicotiana tabacum
Nitab4.5_0002905g0040 Nicotiana tabacum
Nitab4.5_0004454g0030 Nicotiana tabacum
Nitab4.5_0004607g0030 Nicotiana tabacum
Nitab4.5_0004607g0040 Nicotiana tabacum
Nitab4.5_0005964g0010 Nicotiana tabacum
Nitab4.5_0005964g0020 Nicotiana tabacum
Nitab4.5_0005964g0040 Nicotiana tabacum
Nitab4.5_0020917g0010 Nicotiana tabacum
Nitab4.5_0025009g0010 Nicotiana tabacum
Oeu016217.1 Olea europaea
Oeu019149.1 Olea europaea
Oeu021438.1 Olea europaea
Oeu040913.1 Olea europaea
Oeu042016.1 Olea europaea
Oeu042759.1 Olea europaea
Oeu048250.1 Olea europaea
Peaxi162Scf00033g02314 Petunia axillaris
Peaxi162Scf00171g00733 Petunia axillaris
Peaxi162Scf00171g00734 Petunia axillaris
Peaxi162Scf00358g00614 Petunia axillaris
Peaxi162Scf00519g00315 Petunia axillaris
Peaxi162Scf00760g00017 Petunia axillaris
Peaxi162Scf00760g00218 Petunia axillaris
Peaxi162Scf00760g00219 Petunia axillaris
PGR083G2740 Punica granatum
PGSC0003DMG400001986 Solanum tuberosum
PGSC0003DMG400027047 Solanum tuberosum
PGSC0003DMG400027748 Solanum tuberosum
PGSC0003DMG400027749 Solanum tuberosum
PGSC0003DMG400035890 Solanum tuberosum
PGSC0003DMG400037321 Solanum tuberosum
Phvul.004G145701 Phaseolus vulgaris
Phvul.004G145800 Phaseolus vulgaris
Phvul.008G012200 Phaseolus vulgaris
Phvul.008G012300 Phaseolus vulgaris
Potri.010G204700 Populus trichocarpa
Potri.012G040100 Populus trichocarpa
Prupe.2G233700 Prunus persica
Prupe.2G233800 Prunus persica
Prupe.2G233900 Prunus persica
Prupe.2G234000 Prunus persica
Prupe.2G234100 Prunus persica
Prupe.5G239200 Prunus persica
Psat1g123560 Pisum sativum
Psat3g179160 Pisum sativum
QL04p068053 Quercus lobata
QL08p059239 Quercus lobata
RcHm_v2.0_Chr1g0366551 Rosa chinensis
RcHm_v2.0_Chr1g0366591 Rosa chinensis
RcHm_v2.0_Chr1g0366601 Rosa chinensis
RcHm_v2.0_Chr7g0177721 Rosa chinensis
RcHm_v2.0_Chr7g0177731 Rosa chinensis
Sabra10G0158200 Salix brachista
Sabra10G0158300 Salix brachista
SalBow2G2007 Salvia bowleyana
SalBow2G3130 Salvia bowleyana
SalBow3G2180 Salvia bowleyana
SalBow3G2728 Salvia bowleyana
SalBow3G4426 Salvia bowleyana
SalBow5G4446 Salvia bowleyana
SalBow6G1605 Salvia bowleyana
SalBow6G2650 Salvia bowleyana
SalBow6G3766 Salvia bowleyana
SalBow6G4807 Salvia bowleyana
SalBow6G5537 Salvia bowleyana
SalBow6G6394 Salvia bowleyana
SalBow6G6566 Salvia bowleyana
SalBow6G6579 Salvia bowleyana
Sc06g0002620 Simmondsia chinensis
Sed0005662 Sechium edule
Sed0016212 Sechium edule
Sed0019419 Sechium edule
Sed0020714 Sechium edule
Sed0021883 Sechium edule
Sed0022735 Sechium edule
Sed0023282 Sechium edule
Sed0024270 Sechium edule
SEGI_12796 Sequoiadendron giganteum
Solyc01g005040.3 Solanum lycopersicum
Solyc03g098080.1 Solanum lycopersicum
Solyc03g098090.2 Solanum lycopersicum
Solyc03g112800.2 Solanum lycopersicum
Solyc04g011467.1 Solanum lycopersicum
Solyc04g011480.3 Solanum lycopersicum
Solyc04g011490.4 Solanum lycopersicum
Solyc05g055150.1 Solanum lycopersicum
Solyc06g072350.3 Solanum lycopersicum
Solyc11g006455.1 Solanum lycopersicum
Sopen03g028790 Solanum pennellii
Sopen03g031880 Solanum pennellii
Sopen04g005650 Solanum pennellii
Sopen04g005660 Solanum pennellii
Sopen04g005670 Solanum pennellii
Sopen06g028720 Solanum pennellii
Sp4g21820 Schrenkiella parvula
Sp4g21830 Schrenkiella parvula
TAR629G0597 Trochodendron aralioides
THA.LOC104810173 Tarenaya hassleriana
THA.LOC104824587 Tarenaya hassleriana
Thecc.03G067200 Theobroma cacao
Thecc.09G204000 Theobroma cacao
Thecc.10G043700 Theobroma cacao
Thhalv10017305m.g Eutrema salsugineum
Thhalv10017310m.g Eutrema salsugineum
TPR.G15502 Trifolium pratense
TPR.G15505 Trifolium pratense
TPR.G15520 Trifolium pratense
TPR.G18296 Trifolium pratense
TPR.G18306 Trifolium pratense
TPR.G28607 Trifolium pratense
TWI38G1308 Tripterygium wilfordii
TWI60G0723 Tripterygium wilfordii
TWI74G0850 Tripterygium wilfordii
TWI81G0381 Tripterygium wilfordii
VMungo0464G0502 Vigna mungo
VMungo0464G0902 Vigna mungo
VMungo0464G1622 Vigna mungo
VMungo1383G2089 Vigna mungo
VMungo1383G2148 Vigna mungo

User provided reference genes

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