Gene: AT2G39530

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT2G39530
  • Transcript Identifier AT2G39530.1
  • Gene Type Coding gene
  • Location Chr2 : 16498659-16499401 : negative

Gene Family Information

  • ID HOM05D002366
  • #Genes/#Species 287/74
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT2G39530.1
  • Alias CASPL4D1,CASP-like protein 4D1
  • uniprot Q8GWD5

Descriptions

  • Description Uncharacterized protein family (UPF0497)
  • Computational description Uncharacterised protein family (UPF0497); CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0497, trans-membrane plant (InterPro:IPR006702), Uncharacterised protein family UPF0497, trans-membrane plant subgroup (InterPro:IPR006459); BEST Arabidopsis thaliana protein match is: Uncharacterised protein family (UPF0497) (TAIR:AT2G39518.1); Has 200 Blast hits to 200 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 200; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0051539
IBA
Gene Ontology4 iron, 4 sulfur cluster binding1

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
ISM
Gene Ontologychloroplast
GO:0005886
IEA
GOA Databaseplasma membrane
GO:0005886
IDA
Gene Ontologyplasma membrane2
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0016020
IEA
GOA Databasemembrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR006702 Casparian strip membrane protein domain
Mapman id Description
35.1 not assigned.annotated