Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p22280 Brassica napus
A03p29100 Brassica napus
A03p59970 Brassica napus
A03p60080 Brassica napus
A04p30260 Brassica napus
A05p06620 Brassica napus
Aa31LG11G5700 Aethionema arabicum
Aa31LG2G20140 Aethionema arabicum
Aa31LG5G19850 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.1508 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_117.1509 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.909 Anthoceros agrestis
Actinidia02374 Actinidia chinensis
Ah.10g037090 Amaranthus hybridus
Ah.16g102680 Amaranthus hybridus
AL4G37250 Arabidopsis lyrata
AL5G36790 Arabidopsis lyrata
Aqoxy1G00834 Aquilegia oxysepala
Aqoxy2G02346 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.DLQL5C Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.I9S39B Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.W674VD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YDJ0SS Arachis hypogaea
AT2G39770 Arabidopsis thaliana
AT3G55590 Arabidopsis thaliana
AT4G30570 Arabidopsis thaliana
ATR0559G104 Amborella trichopoda
ATR0559G321 Amborella trichopoda
ATR0594G046 Amborella trichopoda
Atru.chr12.320 Acer truncatum
Atru.chr12.353 Acer truncatum
Atru.chr8.2047 Acer truncatum
Atru.chr8.2055 Acer truncatum
AUR62012144 Chenopodium quinoa
AUR62040691 Chenopodium quinoa
AUR62042674 Chenopodium quinoa
BcaB01g02740 Brassica carinata
BcaB03g16226 Brassica carinata
BcaC01g04664 Brassica carinata
BcaC01g05466 Brassica carinata
BcaC01g05467 Brassica carinata
BcaC02g12111 Brassica carinata
BcaC06g35580 Brassica carinata
BcaNung00566 Brassica carinata
BcaNung04567 Brassica carinata
BcaNung04569 Brassica carinata
BolC3t15023H Brassica oleracea
BolC3t15828H Brassica oleracea
BolC4t22389H Brassica oleracea
BolC4t28259H Brassica oleracea
BolC5t30403H Brassica oleracea
BolC6t35161H Brassica oleracea
BolC6t35173H Brassica oleracea
BolC6t35661H Brassica oleracea
BolC7t41821H Brassica oleracea
BolC7t46260H Brassica oleracea
BraA03t11460Z Brassica rapa
BraA03t12105Z Brassica rapa
BraA03t15053Z Brassica rapa
BraA03t15054Z Brassica rapa
BraA04t18482Z Brassica rapa
BraA05t19629Z Brassica rapa
C03p26380 Brassica napus
C03p35160 Brassica napus
C03p35170 Brassica napus
C04p07730 Brassica napus
C04p67600 Brassica napus
C06p00320 Brassica napus
C06p05540 Brassica napus
C07p13280 Brassica napus
C07p58030 Brassica napus
CAN.G115.4 Capsicum annuum
CAN.G554.10 Capsicum annuum
CANSAT35G0571 Cannabis sativa
CANSAT56G3546 Cannabis sativa
CARHR134630 Cardamine hirsuta
Carub.0004s2185 Capsella rubella
Carub.0007s1000 Capsella rubella
Ca_05903_v3 Cicer arietinum L.
Ca_08196_v3 Cicer arietinum L.
Ca_25274_v3 Cicer arietinum L.
Ca_29230_v3 Cicer arietinum L.
CBR_g26392 Chara braunii
Cc02_g07370 Coffea canephora
Cc05_g00320 Coffea canephora
CDE02G3896 Ceratophyllum demersum
CDE03G0316 Ceratophyllum demersum
CDE04G2812 Ceratophyllum demersum
CDE09G1411 Ceratophyllum demersum
Cfa001418 Carpinus fangiana
Cfa027038 Carpinus fangiana
Ciclev10012040m.g Citrus clementina
Ciclev10033733m.g Citrus clementina
CiPaw.01G291900 Carya illinoinensis
CiPaw.01G292000 Carya illinoinensis
CiPaw.02G187100 Carya illinoinensis
CiPaw.09G198100 Carya illinoinensis
CiPaw.11G064700 Carya illinoinensis
ClCG11G006630 Citrullus lanatus
COL.COLO4_01239 Corchorus olitorius
COL.COLO4_14741 Corchorus olitorius
COL.COLO4_25505 Corchorus olitorius
COL.COLO4_35190 Corchorus olitorius
Cpa.g.sc33.165 Carica papaya
Cpa.g.sc454.1 Carica papaya
Cre16.g672800 Chlamydomonas reinhardtii
CsaV3_6G001370 Cucumis sativus L.
CSS0023969 Camellia sinensis var. sinensis
CSS0033764 Camellia sinensis var. sinensis
DCAR_011740 Daucus carota
DCAR_024879 Daucus carota
DCAR_027592 Daucus carota
Dinv16260 Davidia involucrata
Dinv34472 Davidia involucrata
Dinv35561 Davidia involucrata
Duzib106G0509 Durio zibethinus
Duzib106G1327 Durio zibethinus
Duzib114G0381 Durio zibethinus
ECA232G0864 Erigeron canadensis
ECA238G2725 Erigeron canadensis
EL10Ac2g04693 Beta vulgaris
Eucgr.G02988 Eucalyptus grandis
FAN01G0410 Fragaria x ananassa
FAN03G1469 Fragaria x ananassa
FAN06G0516 Fragaria x ananassa
FAN06G4516 Fragaria x ananassa
FAN10G0498 Fragaria x ananassa
FvH4_7g23380 Fragaria vesca
Glyma.02G250800 Glycine max
Glyma.11G223500 Glycine max
Glyma.11G223700 Glycine max
Glyma.14G065900 Glycine max
Glyma.18G034400 Glycine max
Gohir.A04G084900 Gossypium hirsutum
Gohir.A05G347500 Gossypium hirsutum
Gohir.A10G223100 Gossypium hirsutum
Gohir.D04G064800 Gossypium hirsutum
Gohir.D04G123800 Gossypium hirsutum
Gohir.D10G235400 Gossypium hirsutum
Gorai.011G269100 Gossypium raimondii
Gorai.012G072800 Gossypium raimondii
Gorai.012G106900 Gossypium raimondii
GSVIVG01016470001 Vitis vinifera
HanXRQChr07g0201721 Helianthus annuus
HanXRQChr09g0247091 Helianthus annuus
HanXRQChr10g0312651 Helianthus annuus
HanXRQChr15g0496461 Helianthus annuus
Haze_17126 Corylus avellana
Haze_20847 Corylus avellana
Haze_27279 Corylus avellana
Hma1.2p1_0026F.1_g016330 Hydrangea macrophylla
Hma1.2p1_0039F.1_g024640 Hydrangea macrophylla
HPP92_015486 Vanilla planifolia
HPP92_019231 Vanilla planifolia
Hund14190 Selenicereus undatus
Hund16054 Selenicereus undatus
Lalb_Chr04g0250981 Lupinus albus
Lalb_Chr10g0104761 Lupinus albus
Lalb_Chr15g0084511 Lupinus albus
Lalb_Chr17g0346391 Lupinus albus
Lalb_Chr18g0053001 Lupinus albus
Lj1C943T6 Lonicera japonica
Lj2C89T10 Lonicera japonica
Lj6g0009489 Lotus japonicus
Lj8A78T48 Lonicera japonica
LjContig00141g0028232 Lotus japonicus
Lsat_1_v5_gn_2_117921 Lactuca sativa
Lsat_1_v5_gn_7_48020 Lactuca sativa
Lsat_1_v5_gn_9_63521 Lactuca sativa
Manes.07G120300 Manihot esculenta
Manes.10G025000 Manihot esculenta
Mapoly0034s0043 Marchantia polymorpha
MBI05_g02641_MAGBIO Magnolia biondii
MBI05_g35173_MAGBIO Magnolia biondii
MBI13_g21691_MAGBIO Magnolia biondii
MBI14_g09016_MAGBIO Magnolia biondii
MBI14_g13887_MAGBIO Magnolia biondii
MD01G1139900 Malus domestica
MD07G1204200 Malus domestica
Medtr3g069070 Medicago truncatula
Medtr4g133690 Medicago truncatula
Medtr5g080770 Medicago truncatula
MELO3C008241.2 Cucumis melo
Migut.F00743 Erythranthe guttata
MSTRG.264 Avicennia marina
MSTRG.27363 Avicennia marina
Nitab4.5_0000779g0050 Nicotiana tabacum
Nitab4.5_0000987g0120 Nicotiana tabacum
Nitab4.5_0003098g0070 Nicotiana tabacum
Nitab4.5_0003362g0030 Nicotiana tabacum
Nitab4.5_0004474g0030 Nicotiana tabacum
Nitab4.5_0011556g0020 Nicotiana tabacum
Nn1g00549 Nelumbo nucifera
Nn2g11244 Nelumbo nucifera
Nn2g13486 Nelumbo nucifera
Oeu011124.1 Olea europaea
Oeu031365.1 Olea europaea
Oeu039017.1 Olea europaea
Oeu062936.1 Olea europaea
Os01g0847200 Oryza sativa ssp. japonica
Os03g0268400 Oryza sativa ssp. japonica
Os08g0237200 Oryza sativa ssp. japonica
Peaxi162Scf00584g00016 Petunia axillaris
Peaxi162Scf00611g00037 Petunia axillaris
Peaxi162Scf00658g00419 Petunia axillaris
PGR142G2988 Punica granatum
PGSC0003DMG400008891 Solanum tuberosum
PGSC0003DMG400015098 Solanum tuberosum
PGSC0003DMG400015645 Solanum tuberosum
Phvul.001G236801 Phaseolus vulgaris
Phvul.008G230600 Phaseolus vulgaris
Potri.006G090300 Populus trichocarpa
Potri.008G006700 Populus trichocarpa
Potri.008G060100 Populus trichocarpa
Potri.010G198800 Populus trichocarpa
Pp3c24_16870 Physcomitrium patens
Pp3c8_17380 Physcomitrium patens
Prupe.2G240500 Prunus persica
Psat2g038640 Pisum sativum
Psat5g040640 Pisum sativum
PSO339G0833 Papaver somniferum
PSO339G4371 Papaver somniferum
PSO384G3371 Papaver somniferum
PSO513G0138 Papaver somniferum
QL07p028934 Quercus lobata
QL07p029615 Quercus lobata
QL08p061522 Quercus lobata
QL08p061600 Quercus lobata
RcHm_v2.0_Chr1g0368511 Rosa chinensis
Rhsim03G0136400 Rhododendron simsii
Rhsim09G0168600 Rhododendron simsii
Sabra06G0068300 Salix brachista
Sabra08G0003700 Salix brachista
Sabra08G0044200 Salix brachista
Sabra10G0153100 Salix brachista
SalBow3G1271 Salvia bowleyana
SalBow8G3690 Salvia bowleyana
Sc11g0007660 Simmondsia chinensis
Sed0006207 Sechium edule
Sed0026845 Sechium edule
SEGI_03876 Sequoiadendron giganteum
SEGI_25688 Sequoiadendron giganteum
SEGI_36217 Sequoiadendron giganteum
SEGI_36926 Sequoiadendron giganteum
SGA_v2.0_scaffold108G31004 Striga asiatica
SGA_v2.0_scaffold2G00982 Striga asiatica
SHI12865 Sapria himalayana
SMO143G0026 Selaginella moellendorffii
SMO347G0343 Selaginella moellendorffii
Solyc03g096730.3 Solanum lycopersicum
Solyc06g051270.3 Solanum lycopersicum
Solyc09g011220.3 Solanum lycopersicum
Sopen03g027180 Solanum pennellii
Sopen06g017210 Solanum pennellii
Sopen09g005970 Solanum pennellii
Sp4g22060 Schrenkiella parvula
Sp5g06890 Schrenkiella parvula
Sp7g28500 Schrenkiella parvula
TAR369G0891 Trochodendron aralioides
TAR623G0425 Trochodendron aralioides
TAR633G2071 Trochodendron aralioides
TAR636G1448 Trochodendron aralioides
TAR636G1475 Trochodendron aralioides
TAR636G2491 Trochodendron aralioides
THA.LOC104806548 Tarenaya hassleriana
THA.LOC104810049 Tarenaya hassleriana
THA.LOC104824291 Tarenaya hassleriana
Thecc.05G032900 Theobroma cacao
Thecc.10G035100 Theobroma cacao
Thhalv10002042m.g Eutrema salsugineum
Thhalv10016850m.g Eutrema salsugineum
Thhalv10025578m.g Eutrema salsugineum
TPR.G10322 Trifolium pratense
TPR.G25856 Trifolium pratense
TWI15G1081 Tripterygium wilfordii
TWI38G0414 Tripterygium wilfordii
TWI74G0364 Tripterygium wilfordii
unitig_0.g1025 Utricularia gibba
unitig_0.g1026 Utricularia gibba
unitig_22.g6671 Utricularia gibba
unitig_27.g25069 Utricularia gibba
unitig_61.g26164 Utricularia gibba
vmacro10214 Vaccinium macrocarpon
VMungo0647G0710 Vigna mungo
VMungo1383G1094 Vigna mungo
Zm00001eb012020 Zea mays
Zm00001eb148030 Zea mays
Zm00001eb367780 Zea mays

User provided reference genes

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