Gene: AT2G39770

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT2G39770
  • Transcript Identifier AT2G39770.1
  • Gene Type Coding gene
  • Location Chr2 : 16589401-16590741 : positive

Gene Family Information

  • ID HOM05D002357
  • #Genes/#Species 288/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT2G39770.1
  • symbol CYT1
  • Alias EMB101,EMBRYO DEFECTIVE 101,GMP1,GDP-MANNOSE PYROPHOSPHORYLASE 1,SOZ1,SENSITIVE TO OZONE 1,VTC1,VITAMIN C DEFECTIVE 1
  • full_name CYTOKINESIS DEFECTIVE 1
  • uniprot O22287

Descriptions

  • Description Glucose-1-phosphate adenylyltransferase family protein
  • Computational description CYTOKINESIS DEFECTIVE 1 (CYT1); CONTAINS InterPro DOMAIN/s: Trimeric LpxA-like (InterPro:IPR011004), Bacterial transferase hexapeptide repeat (InterPro:IPR001451), Nucleotidyl transferase (InterPro:IPR005835); BEST Arabidopsis thaliana protein match is: Glucose-1-phosphate adenylyltransferase family protein (TAIR:AT3G55590.1); Has 29262 Blast hits to 29252 proteins in 3030 species: Archae - 1046; Bacteria - 20499; Metazoa - 437; Fungi - 382; Plants - 510; Viruses - 0; Other Eukaryotes - 6388 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006486
IBA
Gene Ontologyprotein glycosylation1
GO:0000032
IBA
Gene Ontologycell wall mannoprotein biosynthetic process1
GO:0009298
IBA
IEA
Gene OntologyGDP-mannose biosynthetic process1
GO:0060359
IMP
Gene Ontologyresponse to ammonium ion2
GO:0009058
IEA
GOA Databasebiosynthetic process
GO:0009058
IEA
InterProbiosynthetic process
GO:0009908
IMP
Gene Ontologyflower development
GO:1905392
IMP
Gene Ontologyplant organ morphogenesis
GO:0000911
IMP
Gene Ontologycytokinesis by cell plate formation
GO:0019853
IMP
Gene OntologyL-ascorbic acid biosynthetic process3
GO:0030244
IMP
Gene Ontologycellulose biosynthetic process4
GO:0009408
IMP
Gene Ontologyresponse to heat5
GO:0042742
IMP
Gene Ontologydefense response to bacterium6
GO:0009753
IEP
Gene Ontologyresponse to jasmonic acid7
GO:0010193
IEP
Gene Ontologyresponse to ozone7
GO:0009651
IMP
Gene Ontologyresponse to salt stress8

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004475
IEA
GOA Databasemannose-1-phosphate guanylyltransferase activity
GO:0004475
IMP
ISS, IBA
Gene Ontologymannose-1-phosphate guanylyltransferase activity1 3 4
GO:0016779
IEA
GOA Databasenucleotidyltransferase activity
GO:0016779
IBA
Gene Ontologynucleotidyltransferase activity1
GO:0016779
IEA
InterPronucleotidyltransferase activity
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0016740
IEA
GOA Databasetransferase activity
GO:0005525
IEA
GOA DatabaseGTP binding
GO:0003674
ND
Gene Ontologymolecular_function
GO:0005515
IPI
Gene Ontologyprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
IEA
GOA Databasecytoplasm
GO:0005737
ISM, IBA
Gene Ontologycytoplasm1
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
IDA
Gene Ontologynucleus9
GO:0005575
ND
Gene Ontologycellular_component
GO:0005829
IDA
Gene Ontologycytosol

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR029044 Nucleotide-diphospho-sugar transferases
IPR001451 Hexapeptide repeat
IPR005835 Nucleotidyl transferase domain
Mapman id Description
10.5.6.1.3 Redox homeostasis.ascorbate-based redox regulation.ascorbate metabolism.L-galactose biosynthesis pathway.GDP-D-mannose pyrophosphorylase (VTC1)
3.13.1.1 Carbohydrate metabolism.nucleotide sugar biosynthesis.GDP-D-mannose biosynthesis.GDP-D-mannose pyrophosphorylase (VTC1)