Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p15130 Brassica napus
A07p21050 Brassica napus
A09p14510 Brassica napus
A09p69020 Brassica napus
A10p00680 Brassica napus
Aa31LG1G10600 Aethionema arabicum
Aa31LG2G1630 Aethionema arabicum
Aa31LG9G200 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.142 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.1675 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.1677 Anthoceros agrestis
Actinidia07978 Actinidia chinensis
Actinidia20256 Actinidia chinensis
Actinidia27297 Actinidia chinensis
Ah.05g179320 Amaranthus hybridus
Ah.12g053020 Amaranthus hybridus
AL1G11230 Arabidopsis lyrata
AL3G53240 Arabidopsis lyrata
AL7G47180 Arabidopsis lyrata
Aqoxy7G00043 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.I6SJVD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JTDL0E Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KIS81Y Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.R3JKZW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Y4HKS6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Z31VM8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZAK9JQ Arachis hypogaea
AT1G01230 Arabidopsis thaliana
AT5G42000 Arabidopsis thaliana
ATR0559G179 Amborella trichopoda
ATR0757G216 Amborella trichopoda
Atru.chr5.710 Acer truncatum
Atru.chr9.1916 Acer truncatum
AUR62004521 Chenopodium quinoa
AUR62007030 Chenopodium quinoa
AUR62019893 Chenopodium quinoa
AUR62019894 Chenopodium quinoa
AUR62022734 Chenopodium quinoa
BcaB03g13567 Brassica carinata
BcaB07g31482 Brassica carinata
BcaC04g22594 Brassica carinata
BcaC08g44574 Brassica carinata
BcaC08g44575 Brassica carinata
BolC5t28857H Brassica oleracea
BolC6t37219H Brassica oleracea
BolC8t52873H Brassica oleracea
BolC9t54648H Brassica oleracea
BraA04t17154Z Brassica rapa
BraA07t29792Z Brassica rapa
BraA09t37099Z Brassica rapa
BraA09t42239Z Brassica rapa
BraA10t42345Z Brassica rapa
C05p00720 Brassica napus
C06p20400 Brassica napus
C08p53590 Brassica napus
C09p17560 Brassica napus
CAN.G1415.15 Capsicum annuum
CAN.G390.12 Capsicum annuum
CAN.G567.70 Capsicum annuum
CANSAT21G2020 Cannabis sativa
CANSAT56G2437 Cannabis sativa
CARHR001230 Cardamine hirsuta
CARHR212560 Cardamine hirsuta
Carub.0001s0098 Capsella rubella
Carub.0007s3337 Capsella rubella
Ca_23512_v3 Cicer arietinum L.
Ca_30404_v3 Cicer arietinum L.
CBR_g38199 Chara braunii
Cc02_g39640 Coffea canephora
Cc08_g16570 Coffea canephora
CDE09G0645 Ceratophyllum demersum
CDE11G0757 Ceratophyllum demersum
Cfa003776 Carpinus fangiana
Cfa022603 Carpinus fangiana
Ciclev10022637m.g Citrus clementina
Ciclev10022658m.g Citrus clementina
CiPaw.02G042100 Carya illinoinensis
CiPaw.11G114800 Carya illinoinensis
CiPaw.12G079300 Carya illinoinensis
ClCG05G000680 Citrullus lanatus
COL.COLO4_06239 Corchorus olitorius
COL.COLO4_10767 Corchorus olitorius
COL.COLO4_26760 Corchorus olitorius
Cpa.g.sc15.31 Carica papaya
Cpa.g.sc96.60 Carica papaya
Cre12.g516100 Chlamydomonas reinhardtii
CsaV3_3G007890 Cucumis sativus L.
CSS0006052 Camellia sinensis var. sinensis
CSS0029248 Camellia sinensis var. sinensis
CSS0045274 Camellia sinensis var. sinensis
CSS0049350 Camellia sinensis var. sinensis
DCAR_006496 Daucus carota
Dinv08465 Davidia involucrata
Dinv09787 Davidia involucrata
Dinv32611 Davidia involucrata
Dinv34227 Davidia involucrata
Duzib084G1363 Durio zibethinus
Duzib133G1474 Durio zibethinus
Duzib138G1950 Durio zibethinus
Duzib205G0893 Durio zibethinus
Duzib268G0502 Durio zibethinus
ECA233G2123 Erigeron canadensis
EL10Ac1g00233 Beta vulgaris
EL10Ac5g12465 Beta vulgaris
Eucgr.E00036 Eucalyptus grandis
Eucgr.E01032 Eucalyptus grandis
FAN01G1206 Fragaria x ananassa
FAN03G0382 Fragaria x ananassa
FAN04G2906 Fragaria x ananassa
FAN06G1817 Fragaria x ananassa
FAN06G2070 Fragaria x ananassa
FAN08G3659 Fragaria x ananassa
FAN10G1582 Fragaria x ananassa
FAN10G1993 Fragaria x ananassa
FAN13G0598 Fragaria x ananassa
FAN18G2690 Fragaria x ananassa
FvH4_5g11390 Fragaria vesca
FvH4_7g17010 Fragaria vesca
Glyma.07G053600 Glycine max
Glyma.16G015700 Glycine max
Glyma.16G022700 Glycine max
Gohir.1Z049397 Gossypium hirsutum
Gohir.A07G136200 Gossypium hirsutum
Gohir.A08G110800 Gossypium hirsutum
Gohir.A11G098800 Gossypium hirsutum
Gohir.A12G113600 Gossypium hirsutum
Gohir.A12G238700 Gossypium hirsutum
Gohir.D07G141300 Gossypium hirsutum
Gohir.D08G124100 Gossypium hirsutum
Gohir.D11G103366 Gossypium hirsutum
Gohir.D12G117100 Gossypium hirsutum
Gohir.D12G239800 Gossypium hirsutum
Gorai.001G153200 Gossypium raimondii
Gorai.004G130600 Gossypium raimondii
Gorai.008G126900 Gossypium raimondii
Gorai.008G256900 Gossypium raimondii
GSVIVG01019621001 Vitis vinifera
GSVIVG01027185001 Vitis vinifera
HanXRQChr02g0047161 Helianthus annuus
HanXRQChr05g0130901 Helianthus annuus
HanXRQChr07g0189281 Helianthus annuus
HanXRQChr09g0258041 Helianthus annuus
HanXRQChr17g0534351 Helianthus annuus
HanXRQChr17g0563301 Helianthus annuus
Haze_09138 Corylus avellana
Haze_15684 Corylus avellana
Haze_15685 Corylus avellana
Hma1.2p1_0101F.1_g049120 Hydrangea macrophylla
Hma1.2p1_0440F.1_g153680 Hydrangea macrophylla
Hma1.2p1_0456F.1_g156470 Hydrangea macrophylla
Hma1.2p1_2584F.1_g324873 Hydrangea macrophylla
HPP92_014455 Vanilla planifolia
HPP92_021106 Vanilla planifolia
HPP92_025955 Vanilla planifolia
Hund11363 Selenicereus undatus
Hund16725 Selenicereus undatus
Hund27178 Selenicereus undatus
Lalb_Chr04g0254341 Lupinus albus
Lalb_Chr10g0100701 Lupinus albus
Lalb_Chr17g0342801 Lupinus albus
Lj2C159T3 Lonicera japonica
Lj3g0018618 Lotus japonicus
Lj7A496T104 Lonicera japonica
Lj7C496T15 Lonicera japonica
Lj8A202G40 Lonicera japonica
Lsat_1_v5_gn_3_12060 Lactuca sativa
Lsat_1_v5_gn_4_30840 Lactuca sativa
Lsat_1_v5_gn_6_9001 Lactuca sativa
Manes.01G052112 Manihot esculenta
Manes.01G243900 Manihot esculenta
Manes.02G004900 Manihot esculenta
Manes.05G020500 Manihot esculenta
Mapoly0075s0026 Marchantia polymorpha
MBI02_g32746_MAGBIO Magnolia biondii
MBI04_g32676_MAGBIO Magnolia biondii
MBI12_g21751_MAGBIO Magnolia biondii
MD01G1084800 Malus domestica
MD06G1114100 Malus domestica
MD07G1153400 Malus domestica
MD14G1135400 Malus domestica
Medtr8g027285 Medicago truncatula
MELO3C006007.2 Cucumis melo
Migut.B01895 Erythranthe guttata
Migut.E00732 Erythranthe guttata
MSTRG.12190 Avicennia marina
MSTRG.17359 Avicennia marina
MSTRG.24862 Avicennia marina
Nitab4.5_0000307g0040 Nicotiana tabacum
Nitab4.5_0000357g0360 Nicotiana tabacum
Nitab4.5_0002728g0100 Nicotiana tabacum
Nitab4.5_0003266g0020 Nicotiana tabacum
Nitab4.5_0006748g0020 Nicotiana tabacum
Nitab4.5_0006770g0010 Nicotiana tabacum
Nn1g00337 Nelumbo nucifera
Nn3g18918 Nelumbo nucifera
Oeu010000.1 Olea europaea
Oeu010750.1 Olea europaea
Oeu041381.2 Olea europaea
Oeu042947.1 Olea europaea
Os02g0673600 Oryza sativa ssp. japonica
Os04g0567700 Oryza sativa ssp. japonica
Os07g0452500 Oryza sativa ssp. japonica
Peaxi162Scf00074g00353 Petunia axillaris
Peaxi162Scf00117g00418 Petunia axillaris
Peaxi162Scf00345g00026 Petunia axillaris
PGR031G3802 Punica granatum
PGR042G1783 Punica granatum
PGSC0003DMG400000236 Solanum tuberosum
PGSC0003DMG400005019 Solanum tuberosum
PGSC0003DMG400012124 Solanum tuberosum
Phvul.010G115700 Phaseolus vulgaris
Potri.001G086300 Populus trichocarpa
Potri.002G174400 Populus trichocarpa
Potri.003G144600 Populus trichocarpa
Potri.014G101000 Populus trichocarpa
Pp3c11_20050 Physcomitrium patens
Pp3c7_7910 Physcomitrium patens
PRCOL_00006460 Prasinoderma coloniale
Prupe.2G192400 Prunus persica
Prupe.5G126900 Prunus persica
Psat4g162240 Pisum sativum
PSO063G4081 Papaver somniferum
PSO135G0084 Papaver somniferum
PSO170G5333 Papaver somniferum
PSO384G5062 Papaver somniferum
QL02p028855 Quercus lobata
QL08p045976 Quercus lobata
RcHm_v2.0_Chr1g0360391 Rosa chinensis
RcHm_v2.0_Chr7g0186481 Rosa chinensis
Rhsim01G0175000 Rhododendron simsii
Rhsim02G0250000 Rhododendron simsii
Sabra01G0062500 Salix brachista
Sabra02G0138900 Salix brachista
Sabra02G0139000 Salix brachista
Sabra03G0105200 Salix brachista
Sabra14G0074300 Salix brachista
SalBow3G1702 Salvia bowleyana
SalBow3G2567 Salvia bowleyana
Sc01g0002450 Simmondsia chinensis
Sc01g0010520 Simmondsia chinensis
Sed0001735 Sechium edule
Sed0002110 Sechium edule
Sed0005732 Sechium edule
Sed0007701 Sechium edule
SEGI_00982 Sequoiadendron giganteum
SEGI_27705 Sequoiadendron giganteum
SEGI_30370 Sequoiadendron giganteum
SGA_v2.0_scaffold104G30277 Striga asiatica
SGA_v2.0_scaffold22G09955 Striga asiatica
SGA_v2.0_scaffold23G10148 Striga asiatica
SGA_v2.0_scaffold36G14283 Striga asiatica
SMO356G0423 Selaginella moellendorffii
Solyc01g096130.3 Solanum lycopersicum
Solyc08g082920.3 Solanum lycopersicum
Solyc12g055855.2 Solanum lycopersicum
Sopen01g039860 Solanum pennellii
Sopen08g031150 Solanum pennellii
Sopen12g024350 Solanum pennellii
Sp1g01050 Schrenkiella parvula
Sp7g00130 Schrenkiella parvula
TAR374G0797 Trochodendron aralioides
TAR375G0507 Trochodendron aralioides
TAR629G0986 Trochodendron aralioides
TAR636G2552 Trochodendron aralioides
THA.LOC104801362 Tarenaya hassleriana
THA.LOC104809312 Tarenaya hassleriana
THA.LOC104817058 Tarenaya hassleriana
THA.LOC104817445 Tarenaya hassleriana
THA.LOC104823622 Tarenaya hassleriana
Thecc.01G339000 Theobroma cacao
Thecc.03G224300 Theobroma cacao
Thhalv10008983m.g Eutrema salsugineum
Thhalv10023737m.g Eutrema salsugineum
Thhalv10027975m.g Eutrema salsugineum
TPR.G15908 Trifolium pratense
TWI15G0971 Tripterygium wilfordii
TWI23G0099 Tripterygium wilfordii
TWI81G0316 Tripterygium wilfordii
unitig_0.g2234 Utricularia gibba
unitig_62.g23787 Utricularia gibba
unitig_736.g22807 Utricularia gibba
unitig_744.g24304 Utricularia gibba
unitig_899.g14791 Utricularia gibba
vmacro04286 Vaccinium macrocarpon
vmacro11519 Vaccinium macrocarpon
vmacro12660 Vaccinium macrocarpon
VMungo0331G0426 Vigna mungo
Zm00001eb096530 Zea mays
Zm00001eb187110 Zea mays
Zm00001eb250380 Zea mays
Zm00001eb306470 Zea mays

User provided reference genes

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