Gene: AT5G42000

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G42000
  • Transcript Identifier AT5G42000.1
  • Gene Type Coding gene
  • Location Chr5 : 16799455-16800681 : positive

Gene Family Information

  • ID HOM05D002334
  • #Genes/#Species 291/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G42000.1
  • uniprot Q9FHY3

Descriptions

  • Description ORMDL family protein
  • Computational description ORMDL family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: protein folding; LOCATED IN: integral to membrane, endoplasmic reticulum; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ORMDL (InterPro:IPR007203); BEST Arabidopsis thaliana protein match is: ORMDL family protein (TAIR:AT1G01230.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0042742
IMP
Gene Ontologydefense response to bacterium1
GO:0006672
IBA
Gene Ontologyceramide metabolic process2
GO:0090156
IMP
IBA
Gene Ontologycellular sphingolipid homeostasis2 3
GO:1900060
IBA
Gene Ontologynegative regulation of ceramide biosynthetic process2
GO:0034976
IMP
Gene Ontologyresponse to endoplasmic reticulum stress1
GO:0030148
IMP
Gene Ontologysphingolipid biosynthetic process1
GO:0010150
IGI
Gene Ontologyleaf senescence1
GO:0006979
IMP
Gene Ontologyresponse to oxidative stress1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IPI
Gene Ontologyprotein binding3

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0016021
IEA
InterProintegral component of membrane
GO:0005789
IEA
Gene Ontologyendoplasmic reticulum membrane
GO:0005789
IEA
InterProendoplasmic reticulum membrane
GO:0016020
IEA
GOA Databasemembrane
GO:0035339
IBA
Gene OntologySPOTS complex2
GO:0005739
ISM
Gene Ontologymitochondrion
GO:0005783
IDA
Gene Ontologyendoplasmic reticulum3

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR007203 ORMDL family
Mapman id Description
5.4.2 Lipid metabolism.sphingolipid biosynthesis.serine C-palmitoyltransferase regulator (ORM)