Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p16210 Brassica napus
A02p12750 Brassica napus
A03p27850 Brassica napus
A03p55630 Brassica napus
A06p19070 Brassica napus
Aa31LG3G6960 Aethionema arabicum
Aa31LG4G17190 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.2757 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.2779 Anthoceros agrestis
Actinidia08875 Actinidia chinensis
Actinidia30871 Actinidia chinensis
Actinidia36809 Actinidia chinensis
Ah.03g147550 Amaranthus hybridus
AL5G28020 Arabidopsis lyrata
AL7G28280 Arabidopsis lyrata
AL8G24710 Arabidopsis lyrata
Aqoxy1G01827 Aquilegia oxysepala
Aqoxy3G01566 Aquilegia oxysepala
Aqoxy4G01805 Aquilegia oxysepala
Aqoxy5G00754 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.4HUU46 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.D9NRKF Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ELME12 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.IDN1KN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.P7T76W Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Q4ZBLD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RE9U9K Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.W7VMII Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YVZ59D Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZAH2CS Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZT2LDC Arachis hypogaea
AT3G48570 Arabidopsis thaliana
AT5G50460 Arabidopsis thaliana
ATR0561G207 Amborella trichopoda
Atru.chr6.1799 Acer truncatum
Atru.chr6.2580 Acer truncatum
AUR62003523 Chenopodium quinoa
AUR62017837 Chenopodium quinoa
AUR62034834 Chenopodium quinoa
BcaB01g00795 Brassica carinata
BcaB01g02889 Brassica carinata
BcaB05g24044 Brassica carinata
BcaC01g04802 Brassica carinata
BcaC03g14646 Brassica carinata
BcaC06g32848 Brassica carinata
BcaC06g32850 Brassica carinata
BcaC07g39342 Brassica carinata
BcaNung06010 Brassica carinata
BolC1t01949H Brassica oleracea
BolC2t08221H Brassica oleracea
BolC3t15681H Brassica oleracea
BolC7t45877H Brassica oleracea
BolC8t49992H Brassica oleracea
BraA01t01557Z Brassica rapa
BraA02t06332Z Brassica rapa
BraA03t11996Z Brassica rapa
BraA03t14630Z Brassica rapa
BraA06t24991Z Brassica rapa
C01p20200 Brassica napus
C02p20810 Brassica napus
C03p33620 Brassica napus
C07p53870 Brassica napus
C08p23630 Brassica napus
CAN.G352.65 Capsicum annuum
CAN.G65.35 Capsicum annuum
CANSAT64G2555 Cannabis sativa
CANSAT80G0419 Cannabis sativa
CARHR157370 Cardamine hirsuta
CARHR232320 Cardamine hirsuta
CARHR257830 Cardamine hirsuta
Carub.0005s1476 Capsella rubella
Carub.0007s1614 Capsella rubella
Carub.0008s1059 Capsella rubella
Ca_06032_v3 Cicer arietinum L.
CBR_g23901 Chara braunii
Cc05_g00680 Coffea canephora
Cc07_g00880 Coffea canephora
CDE02G0674 Ceratophyllum demersum
CDE05G3046 Ceratophyllum demersum
CDE06G0432 Ceratophyllum demersum
CDE06G1168 Ceratophyllum demersum
Cfa018789 Carpinus fangiana
Ciclev10017399m.g Citrus clementina
CiPaw.03G056100 Carya illinoinensis
CiPaw.12G043700 Carya illinoinensis
ClCG03G003820 Citrullus lanatus
ClCG05G013560 Citrullus lanatus
ClCG06G017920 Citrullus lanatus
COL.COLO4_28135 Corchorus olitorius
Cpa.g.c37503 Carica papaya
Cpa.g.sc13.108 Carica papaya
Cre16.g680230 Chlamydomonas reinhardtii
CsaV3_1G000530 Cucumis sativus L.
CsaV3_1G009720 Cucumis sativus L.
CsaV3_3G026970 Cucumis sativus L.
CSS0041226 Camellia sinensis var. sinensis
DCAR_015104 Daucus carota
Dinv11179 Davidia involucrata
Dinv25655 Davidia involucrata
Dinv33334 Davidia involucrata
Duzib084G0339 Durio zibethinus
Duzib147G0826 Durio zibethinus
Duzib187G0464 Durio zibethinus
Duzib205G1969 Durio zibethinus
Duzib264G0778 Durio zibethinus
ECA238G3177 Erigeron canadensis
ECA246G1746 Erigeron canadensis
EL10Ac5g10710 Beta vulgaris
EL10Ac5g11405 Beta vulgaris
Eucgr.K02719 Eucalyptus grandis
FAN02G2302 Fragaria x ananassa
FAN04G1511 Fragaria x ananassa
FAN04G2143 Fragaria x ananassa
FAN05G0615 Fragaria x ananassa
FAN08G3002 Fragaria x ananassa
FAN10G0881 Fragaria x ananassa
FAN10G3415 Fragaria x ananassa
FAN13G0071 Fragaria x ananassa
FAN13G3068 Fragaria x ananassa
FAN15G0459 Fragaria x ananassa
FAN18G2559 Fragaria x ananassa
FvH4_5g08390 Fragaria vesca
FvH4_5g21410 Fragaria vesca
Glyma.02G258800 Glycine max
Glyma.02G258900 Glycine max
Glyma.12G168500 Glycine max
Glyma.14G053200 Glycine max
Gohir.A05G338200 Gossypium hirsutum
Gohir.A07G228600 Gossypium hirsutum
Gohir.A10G071900 Gossypium hirsutum
Gohir.A11G064300 Gossypium hirsutum
Gohir.A12G078666 Gossypium hirsutum
Gohir.A12G189900 Gossypium hirsutum
Gohir.D04G076600 Gossypium hirsutum
Gohir.D04G078200 Gossypium hirsutum
Gohir.D07G235700 Gossypium hirsutum
Gohir.D10G079200 Gossypium hirsutum
Gohir.D11G068600 Gossypium hirsutum
Gohir.D12G192300 Gossypium hirsutum
Gorai.001G271600 Gossypium raimondii
Gorai.007G073400 Gossypium raimondii
Gorai.008G206600 Gossypium raimondii
Gorai.011G086200 Gossypium raimondii
Gorai.012G086400 Gossypium raimondii
GSVIVG01008551001 Vitis vinifera
GSVIVG01033084001 Vitis vinifera
HanXRQChr05g0155171 Helianthus annuus
HanXRQChr07g0198191 Helianthus annuus
HanXRQChr14g0450821 Helianthus annuus
Haze_07145 Corylus avellana
Haze_14882 Corylus avellana
Haze_26332 Corylus avellana
Hma1.2p1_0525F.1_g172440 Hydrangea macrophylla
Hma1.2p1_1057F.1_g252810 Hydrangea macrophylla
HPP92_015837 Vanilla planifolia
HPP92_018533 Vanilla planifolia
Hund02444 Selenicereus undatus
Hund04359 Selenicereus undatus
Lalb_Chr04g0250261 Lupinus albus
Lalb_Chr10g0105451 Lupinus albus
Lalb_Chr17g0347081 Lupinus albus
Lj4g0001471 Lotus japonicus
LjContig00357g0017832 Lotus japonicus
Lsat_1_v5_gn_2_93141 Lactuca sativa
Lsat_1_v5_gn_5_12521 Lactuca sativa
Manes.15G161600 Manihot esculenta
Manes.17G102700 Manihot esculenta
Manes.17G102800 Manihot esculenta
Mapoly0007s0078 Marchantia polymorpha
MBI07_g18751_MAGBIO Magnolia biondii
MBI07_g39448_MAGBIO Magnolia biondii
MBI11_g24619_MAGBIO Magnolia biondii
MCO06G177 Micromonas commoda
MD06G1028800 Malus domestica
MD09G1111900 Malus domestica
MD16G1278200 Malus domestica
MD17G1000500 Malus domestica
MD17G1011800 Malus domestica
Medtr4g127150 Medicago truncatula
Medtr5g084060 Medicago truncatula
MELO3C002366.2 Cucumis melo
MELO3C014891.2 Cucumis melo
Migut.D01267 Erythranthe guttata
Migut.I00524 Erythranthe guttata
Nitab4.5_0000339g0080 Nicotiana tabacum
Nitab4.5_0000624g0010 Nicotiana tabacum
Nitab4.5_0000955g0100 Nicotiana tabacum
Nitab4.5_0001311g0010 Nicotiana tabacum
Nitab4.5_0002775g0060 Nicotiana tabacum
Nitab4.5_0003676g0110 Nicotiana tabacum
Nitab4.5_0003948g0040 Nicotiana tabacum
Nitab4.5_0007282g0030 Nicotiana tabacum
Nn2g10596 Nelumbo nucifera
Nn3g16451 Nelumbo nucifera
Nn4g22301 Nelumbo nucifera
Nn5g27365 Nelumbo nucifera
Oeu004892.1 Olea europaea
Oeu005007.1 Olea europaea
Oeu005106.1 Olea europaea
Oeu018540.1 Olea europaea
Oeu040981.1 Olea europaea
Os02g0178400 Oryza sativa ssp. japonica
Os06g0653900 Oryza sativa ssp. japonica
Peaxi162Scf00089g00231 Petunia axillaris
Peaxi162Scf00536g00415 Petunia axillaris
Peaxi162Scf00763g00226 Petunia axillaris
PGR083G1518 Punica granatum
PGSC0003DMG400015203 Solanum tuberosum
PGSC0003DMG400027063 Solanum tuberosum
Phvul.006G217600 Phaseolus vulgaris
Phvul.008G218100 Phaseolus vulgaris
Potri.001G329400 Populus trichocarpa
Potri.012G098400 Populus trichocarpa
Potri.015G097300 Populus trichocarpa
Potri.017G064032 Populus trichocarpa
Pp3c13_17670 Physcomitrium patens
Pp3c18_13150 Physcomitrium patens
Pp3c19_3570 Physcomitrium patens
Pp3c3_26940 Physcomitrium patens
PRCOL_00003558 Prasinoderma coloniale
Prupe.3G307000 Prunus persica
Prupe.5G043000 Prunus persica
Prupe.5G150500 Prunus persica
Psat0ss8329g0040 Pisum sativum
Psat4g014440 Pisum sativum
PSO017G7293 Papaver somniferum
PSO478G2170 Papaver somniferum
PSO478G3978 Papaver somniferum
QL02p071236 Quercus lobata
QL10p002807 Quercus lobata
RcHm_v2.0_Chr2g0175671 Rosa chinensis
RcHm_v2.0_Chr2g0175721 Rosa chinensis
RcHm_v2.0_Chr7g0190061 Rosa chinensis
RcHm_v2.0_Chr7g0208811 Rosa chinensis
Rhsim08G0042500 Rhododendron simsii
Rhsim08G0190600 Rhododendron simsii
Rhsim10G0006200 Rhododendron simsii
Sabra12G0071800 Salix brachista
Sabra15G0118000 Salix brachista
Sabra16G0210800 Salix brachista
SalBow1G0212 Salvia bowleyana
SalBow1G5326 Salvia bowleyana
SalBow1G6280 Salvia bowleyana
SalBow3G1827 Salvia bowleyana
SalBow4G0639 Salvia bowleyana
SalBow5G0928 Salvia bowleyana
Sc03g0006500 Simmondsia chinensis
Sc04g0000620 Simmondsia chinensis
Sc22g0003790 Simmondsia chinensis
Sed0003596 Sechium edule
Sed0006341 Sechium edule
Sed0011216 Sechium edule
Sed0016756 Sechium edule
SEGI_14299 Sequoiadendron giganteum
SHI11628 Sapria himalayana
SMO145G0171 Selaginella moellendorffii
Sopen03g030060 Solanum pennellii
Sopen06g016610 Solanum pennellii
Sopen06g028320 Solanum pennellii
Sp5g13410 Schrenkiella parvula
Sp6g12640 Schrenkiella parvula
Sp7g22900 Schrenkiella parvula
TAR371G0934 Trochodendron aralioides
TAR374G0222 Trochodendron aralioides
TAR622G0086 Trochodendron aralioides
TAR629G1166 Trochodendron aralioides
THA.LOC104798945 Tarenaya hassleriana
THA.LOC104811586 Tarenaya hassleriana
THA.LOC104818183 Tarenaya hassleriana
THA.LOC104825019 Tarenaya hassleriana
Thecc.03G129900 Theobroma cacao
Thecc.04G037900 Theobroma cacao
Thhalv10010887m.g Eutrema salsugineum
Thhalv10015212m.g Eutrema salsugineum
Thhalv10026733m.g Eutrema salsugineum
TPR.G2072 Trifolium pratense
TPR.G5413 Trifolium pratense
TWI12G0057 Tripterygium wilfordii
TWI14G0681 Tripterygium wilfordii
TWI23G0904 Tripterygium wilfordii
TWI34G0063 Tripterygium wilfordii
TWI60G0739 Tripterygium wilfordii
unitig_8.g3031 Utricularia gibba
vmacro05959 Vaccinium macrocarpon
vmacro16722 Vaccinium macrocarpon
vmacro18350 Vaccinium macrocarpon
vmacro19117 Vaccinium macrocarpon
vmacro23017 Vaccinium macrocarpon
VMungo0647G2389 Vigna mungo
Zm00001eb233830 Zea mays
Zm00001eb274950 Zea mays

User provided reference genes

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