Gene: AT5G50460

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G50460
  • Transcript Identifier AT5G50460.1
  • Gene Type Coding gene
  • Location Chr5 : 20552168-20552509 : negative

Gene Family Information

  • ID HOM05D002329
  • #Genes/#Species 291/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G50460.1
  • uniprot P0DI75

Descriptions

  • Description secE/sec61-gamma protein transport protein
  • Computational description secE/sec61-gamma protein transport protein; FUNCTIONS IN: P-P-bond-hydrolysis-driven protein transmembrane transporter activity; INVOLVED IN: intracellular protein transport, protein transport, protein targeting; LOCATED IN: membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein translocase SEC61 complex gamma subunit (InterPro:IPR008158), Protein secE/sec61-gamma protein (InterPro:IPR001901); BEST Arabidopsis thaliana protein match is: secE/sec61-gamma protein transport protein (TAIR:AT4G24920.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006605
IEA
Gene Ontologyprotein targeting
GO:0006605
IEA
InterProprotein targeting
GO:0071806
IEA
GOA Databaseprotein transmembrane transport
GO:0015031
IEA
GOA Databaseprotein transport
GO:0015031
IEA
InterProprotein transport
GO:0006886
IEA
GOA Databaseintracellular protein transport
GO:0006886
IEA
InterProintracellular protein transport

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008320
IEA
Gene Ontologyprotein transmembrane transporter activity
GO:0008320
IEA
InterProprotein transmembrane transporter activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005622
ISS
Gene Ontologyintracellular anatomical structure
GO:0009536
HDA
Gene Ontologyplastid1
GO:0005789
IEA
GOA Databaseendoplasmic reticulum membrane
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0016020
IEA
GOA Databasemembrane
GO:0016020
IEA
InterPromembrane
GO:0005783
IEA
GOA Databaseendoplasmic reticulum

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR023391 Protein translocase SecE domain superfamily
IPR008158 Protein translocase SEC61 complex, gamma subunit
IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit
Mapman id Description
23.3.1.3.3 Protein translocation.endoplasmic reticulum.co-translational insertion system.Sec61 subcomplex.subunit gamma