Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p27730 Brassica napus
A04p14130 Brassica napus
A07p20660 Brassica napus
A09p20300 Brassica napus
Aa31LG5G11180 Aethionema arabicum
Aa31LG9G13400 Aethionema arabicum
Aa31LG9G790 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.2690 Anthoceros agrestis
Actinidia05874 Actinidia chinensis
Actinidia19566 Actinidia chinensis
Actinidia36232 Actinidia chinensis
Ah.03g148300 Amaranthus hybridus
AL3G10050 Arabidopsis lyrata
AL7G48470 Arabidopsis lyrata
AL8G17090 Arabidopsis lyrata
Aqoxy3G01699 Aquilegia oxysepala
Aqoxy5G03238 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0PNZ7T Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.E110XT Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.H6TCEE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JGYC2J Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.M6NE4G Arachis hypogaea
AT3G02040 Arabidopsis thaliana
AT5G41080 Arabidopsis thaliana
AT5G43300 Arabidopsis thaliana
ATR0582G375 Amborella trichopoda
Atru.chr11.2395 Acer truncatum
Atru.chr6.2617 Acer truncatum
AUR62003390 Chenopodium quinoa
AUR62005680 Chenopodium quinoa
AUR62028875 Chenopodium quinoa
AUR62029437 Chenopodium quinoa
BcaB02g07911 Brassica carinata
BcaB06g27593 Brassica carinata
BcaB07g30586 Brassica carinata
BcaB07g31018 Brassica carinata
BcaC01g06598 Brassica carinata
BcaC03g16571 Brassica carinata
BcaC04g21932 Brassica carinata
BcaC07g37218 Brassica carinata
BcaC08g44506 Brassica carinata
BcaNung05591 Brassica carinata
BcaNung05592 Brassica carinata
BcaNung06846 Brassica carinata
BolC2t10431H Brassica oleracea
BolC3t13695H Brassica oleracea
BolC4t26407H Brassica oleracea
BolC6t37151H Brassica oleracea
BolC8t47483H Brassica oleracea
BolC9t55472H Brassica oleracea
BraA02t07813Z Brassica rapa
BraA04t17074Z Brassica rapa
BraA07t29757Z Brassica rapa
BraA09t37639Z Brassica rapa
BraSC76t46618Z Brassica rapa
C02p43830 Brassica napus
C02p54930 Brassica napus
C03p12220 Brassica napus
C04p48170 Brassica napus
C06p19580 Brassica napus
C08p06360 Brassica napus
C09p25690 Brassica napus
CAN.G473.142 Capsicum annuum
CANSAT56G0347 Cannabis sativa
CANSAT64G1557 Cannabis sativa
CARHR074920 Cardamine hirsuta
CARHR180430 Cardamine hirsuta
CARHR213290 Cardamine hirsuta
Carub.0003s0005 Capsella rubella
Carub.0007s3441 Capsella rubella
Carub.0008s0536 Capsella rubella
Ca_08112_v3 Cicer arietinum L.
CBR_g55398 Chara braunii
Cc07_g01090 Coffea canephora
CDE05G2420 Ceratophyllum demersum
CDE05G3060 Ceratophyllum demersum
Cfa007192 Carpinus fangiana
Cfa009409 Carpinus fangiana
Ciclev10015568m.g Citrus clementina
Ciclev10031648m.g Citrus clementina
CiPaw.03G004400 Carya illinoinensis
CiPaw.06G106700 Carya illinoinensis
ClCG05G013890 Citrullus lanatus
ClCG07G015300 Citrullus lanatus
COL.COLO4_13217 Corchorus olitorius
COL.COLO4_13218 Corchorus olitorius
COL.COLO4_13314 Corchorus olitorius
COL.COLO4_34967 Corchorus olitorius
Cpa.g.sc70.105 Carica papaya
Cre03.g203600 Chlamydomonas reinhardtii
CsaV3_3G026730 Cucumis sativus L.
CsaV3_4G002900 Cucumis sativus L.
CSS0015695 Camellia sinensis var. sinensis
CSS0017281 Camellia sinensis var. sinensis
CSS0039605 Camellia sinensis var. sinensis
CSS0049944 Camellia sinensis var. sinensis
DCAR_000946 Daucus carota
DCAR_014488 Daucus carota
DCAR_026444 Daucus carota
Dinv25635 Davidia involucrata
Dinv33306 Davidia involucrata
Duzib147G1329 Durio zibethinus
Duzib187G0133 Durio zibethinus
Duzib264G0534 Durio zibethinus
Duzib264G0943 Durio zibethinus
ECA238G3722 Erigeron canadensis
ECA246G1363 Erigeron canadensis
ECA246G3915 Erigeron canadensis
EL10Ac6g13565 Beta vulgaris
EL10Ac6g13567 Beta vulgaris
EL10Ac6g15455 Beta vulgaris
Eucgr.B03536 Eucalyptus grandis
Eucgr.I01620 Eucalyptus grandis
FAN02G2034 Fragaria x ananassa
FAN02G3028 Fragaria x ananassa
FAN02G4142 Fragaria x ananassa
FAN05G2616 Fragaria x ananassa
FAN05G4260 Fragaria x ananassa
FAN07G0252 Fragaria x ananassa
FAN09G0834 Fragaria x ananassa
FAN11G2039 Fragaria x ananassa
FAN11G2519 Fragaria x ananassa
FAN12G3171 Fragaria x ananassa
FAN12G3948 Fragaria x ananassa
FAN14G5132 Fragaria x ananassa
FAN16G0732 Fragaria x ananassa
FAN20G0288 Fragaria x ananassa
FAN21G0248 Fragaria x ananassa
FAN21G0555 Fragaria x ananassa
FAN25G1609 Fragaria x ananassa
FvH4_3g29110 Fragaria vesca
FvH4_4g23140 Fragaria vesca
FvH4_4g23141 Fragaria vesca
FvH4_6g53990 Fragaria vesca
Glyma.16G052000 Glycine max
Glyma.19G098500 Glycine max
Gohir.A03G150600 Gossypium hirsutum
Gohir.A07G231400 Gossypium hirsutum
Gohir.A10G070400 Gossypium hirsutum
Gohir.D02G173500 Gossypium hirsutum
Gohir.D07G238600 Gossypium hirsutum
Gohir.D09G033175 Gossypium hirsutum
Gohir.D10G080700 Gossypium hirsutum
Gorai.001G274600 Gossypium raimondii
Gorai.005G195200 Gossypium raimondii
Gorai.006G038200 Gossypium raimondii
Gorai.011G087800 Gossypium raimondii
GSVIVG01033033001 Vitis vinifera
HanXRQChr07g0198091 Helianthus annuus
HanXRQChr13g0408321 Helianthus annuus
HanXRQChr14g0451271 Helianthus annuus
HanXRQChr15g0474781 Helianthus annuus
HanXRQChr15g0490201 Helianthus annuus
HanXRQChr16g0525141 Helianthus annuus
HanXRQChr16g0525151 Helianthus annuus
HanXRQChr17g0551591 Helianthus annuus
HanXRQChr17g0568961 Helianthus annuus
Haze_12467 Corylus avellana
Haze_14915 Corylus avellana
Hma1.2p1_0525F.1_g172655 Hydrangea macrophylla
HPP92_021629 Vanilla planifolia
HPP92_021687 Vanilla planifolia
HPP92_021717 Vanilla planifolia
HPP92_021718 Vanilla planifolia
HPP92_024095 Vanilla planifolia
Hund04258 Selenicereus undatus
Hund06116 Selenicereus undatus
Hund17435 Selenicereus undatus
Hund25489 Selenicereus undatus
Lalb_Chr10g0094321 Lupinus albus
Lalb_Chr10g0094331 Lupinus albus
Lalb_Chr10g0094461 Lupinus albus
Lalb_Chr10g0094471 Lupinus albus
Lalb_Chr10g0094481 Lupinus albus
Lalb_Chr14g0363761 Lupinus albus
Lalb_Chr22g0360161 Lupinus albus
Lj1g0005344 Lotus japonicus
Lj6C833T9 Lonicera japonica
Lj7A613T67 Lonicera japonica
Lsat_1_v5_gn_0_11501 Lactuca sativa
Lsat_1_v5_gn_0_20781 Lactuca sativa
Lsat_1_v5_gn_0_44280 Lactuca sativa
Lsat_1_v5_gn_2_94701 Lactuca sativa
Lsat_1_v5_gn_3_31761 Lactuca sativa
Manes.04G089800 Manihot esculenta
Manes.11G080100 Manihot esculenta
Manes.12G006400 Manihot esculenta
Mapoly0066s0011 Marchantia polymorpha
MBI07_g24749_MAGBIO Magnolia biondii
MBI07_g24750_MAGBIO Magnolia biondii
MBI11_g08323_MAGBIO Magnolia biondii
MBI11_g47339_MAGBIO Magnolia biondii
MCO07G300 Micromonas commoda
MD09G1006500 Malus domestica
MD13G1124800 Malus domestica
MD16G1125700 Malus domestica
MD17G1010400 Malus domestica
Medtr7g083410 Medicago truncatula
MELO3C014925.2 Cucumis melo
MELO3C017753.2 Cucumis melo
Migut.F00032 Erythranthe guttata
MSTRG.24112 Avicennia marina
Nitab4.5_0000519g0150 Nicotiana tabacum
Nitab4.5_0000913g0050 Nicotiana tabacum
Nitab4.5_0002172g0020 Nicotiana tabacum
Nitab4.5_0004291g0010 Nicotiana tabacum
Nn3g16350 Nelumbo nucifera
Nn4g22210 Nelumbo nucifera
Nn8g39685 Nelumbo nucifera
Oeu020396.1 Olea europaea
Oeu035363.1 Olea europaea
Oeu045567.1 Olea europaea
Os02g0514500 Oryza sativa ssp. japonica
Os04g0394100 Oryza sativa ssp. japonica
Os08g0535700 Oryza sativa ssp. japonica
Peaxi162Scf00420g00727 Petunia axillaris
Peaxi162Scf00962g00002 Petunia axillaris
PGR102G2264 Punica granatum
PGR142G4045 Punica granatum
PGSC0003DMG400005228 Solanum tuberosum
PGSC0003DMG403020240 Solanum tuberosum
Phvul.001G091000 Phaseolus vulgaris
Potri.001G061100 Populus trichocarpa
Potri.001G325200 Populus trichocarpa
Potri.017G063500 Populus trichocarpa
Pp3c12_15510 Physcomitrium patens
Pp3c13_3900 Physcomitrium patens
Pp3c3_26090 Physcomitrium patens
Pp3c4_11340 Physcomitrium patens
Pp3s404_10 Physcomitrium patens
PRCOL_00000892 Prasinoderma coloniale
Prupe.1G220500 Prunus persica
Prupe.3G310500 Prunus persica
Psat3g095320 Pisum sativum
PSO017G1256 Papaver somniferum
PSO017G4105 Papaver somniferum
PSO478G0649 Papaver somniferum
PSO478G2871 Papaver somniferum
QL02p070511 Quercus lobata
QL03p050787 Quercus lobata
QL04p012929 Quercus lobata
RcHm_v2.0_Chr2g0176161 Rosa chinensis
RcHm_v2.0_Chr4g0429471 Rosa chinensis
RcHm_v2.0_Chr4g0429481 Rosa chinensis
RcHm_v2.0_Chr6g0250451 Rosa chinensis
RcHm_v2.0_Chr7g0224601 Rosa chinensis
Rhsim08G0040800 Rhododendron simsii
Rhsim10G0003500 Rhododendron simsii
Sabra01G0044000 Salix brachista
Sabra16G0207700 Salix brachista
Sabra17G0057400 Salix brachista
SalBow4G0363 Salvia bowleyana
SalBow4G2531 Salvia bowleyana
Sc07g0003590 Simmondsia chinensis
Sc14g0009200 Simmondsia chinensis
Sed0022331 Sechium edule
Sed0022539 Sechium edule
Sed0025232 Sechium edule
SEGI_29568 Sequoiadendron giganteum
SGA_v2.0_scaffold44G16938 Striga asiatica
SHI04025 Sapria himalayana
SMO356G0500 Selaginella moellendorffii
Solyc01g009870.3 Solanum lycopersicum
Solyc02g094400.4 Solanum lycopersicum
Sopen01g005400 Solanum pennellii
Sopen02g039050 Solanum pennellii
Sp2g08110 Schrenkiella parvula
Sp3g00070 Schrenkiella parvula
Sp7g00820 Schrenkiella parvula
TAR374G1254 Trochodendron aralioides
TAR622G1351 Trochodendron aralioides
TAR629G2302 Trochodendron aralioides
THA.LOC104805317 Tarenaya hassleriana
THA.LOC104814200 Tarenaya hassleriana
THA.LOC104822422 Tarenaya hassleriana
THA.LOC104825641 Tarenaya hassleriana
Thecc.02G198200 Theobroma cacao
Thecc.04G042400 Theobroma cacao
Thhalv10003237m.g Eutrema salsugineum
Thhalv10021007m.g Eutrema salsugineum
Thhalv10027797m.g Eutrema salsugineum
TPR.G5723 Trifolium pratense
TWI34G0595 Tripterygium wilfordii
TWI36G1103 Tripterygium wilfordii
TWI60G1464 Tripterygium wilfordii
unitig_748.g7001 Utricularia gibba
vmacro05982 Vaccinium macrocarpon
vmacro18366 Vaccinium macrocarpon
VMungo1383G2624 Vigna mungo
Zm00001eb036910 Zea mays
Zm00001eb085150 Zea mays
Zm00001eb241920 Zea mays

User provided reference genes

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