Gene: AT3G02040

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G02040
  • Transcript Identifier AT3G02040.1
  • Gene Type Coding gene
  • Location Chr3 : 348505-349909 : negative

Gene Family Information

  • ID HOM05D002315
  • #Genes/#Species 292/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G02040.1
  • symbol SRG3
  • Alias AtGDPD1,GDPD1,Glycerophosphodiester phosphodiesterase 1
  • uniprot Q9SGA2

Descriptions

  • Description senescence-related gene 3
  • Computational description senescence-related gene 3 (SRG3); FUNCTIONS IN: phosphoric diester hydrolase activity, glycerophosphodiester phosphodiesterase activity; INVOLVED IN: glycerol metabolic process, lipid metabolic process; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: PLC-like phosphodiesterase, TIM beta/alpha-barrel domain (InterPro:IPR017946), Glycerophosphoryl diester phosphodiesterase (InterPro:IPR004129); BEST Arabidopsis thaliana protein match is: PLC-like phosphodiesterases superfamily protein (TAIR:AT5G41080.1); Has 1727 Blast hits to 1696 proteins in 532 species: Archae - 28; Bacteria - 1003; Metazoa - 245; Fungi - 173; Plants - 101; Viruses - 2; Other Eukaryotes - 175 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0030643
IMP
Gene Ontologycellular phosphate ion homeostasis1
GO:0071456
HEP
Gene Ontologycellular response to hypoxia2
GO:0046475
IBA
Gene Ontologyglycerophospholipid catabolic process3
GO:0006071
IEA
GOA Databaseglycerol metabolic process
GO:0006629
IEA
GOA Databaselipid metabolic process
GO:0006629
IEA
InterProlipid metabolic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000287
IDA
Gene Ontologymagnesium ion binding1
GO:0008889
IEA
GOA Databaseglycerophosphodiester phosphodiesterase activity
GO:0008889
IDA
Gene Ontologyglycerophosphodiester phosphodiesterase activity1
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0008081
IEA
GOA Databasephosphoric diester hydrolase activity
GO:0008081
IEA
InterProphosphoric diester hydrolase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
ISM
Gene Ontologycytoplasm
GO:0009536
IEA
GOA Databaseplastid
GO:0009536
IDA
Gene Ontologyplastid1
GO:0009507
IEA
GOA Databasechloroplast

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR030395 Glycerophosphodiester phosphodiesterase domain
IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily
Mapman id Description
35.1 not assigned.annotated