Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p19330 Brassica napus
A05p01470 Brassica napus
A08p20300 Brassica napus
Aa31LG1G27690 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.4174 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.5708 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.131 Anthoceros agrestis
Actinidia08625 Actinidia chinensis
Actinidia10104 Actinidia chinensis
Actinidia20195 Actinidia chinensis
Actinidia34192 Actinidia chinensis
Actinidia34196 Actinidia chinensis
Ah.05g179890 Amaranthus hybridus
Ah.07g206040 Amaranthus hybridus
AL4G45620 Arabidopsis lyrata
AL7G24700 Arabidopsis lyrata
Aqoxy5G04116 Aquilegia oxysepala
Aqoxy7G00160 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0IQ56K Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.3VSU3A Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.6RCN30 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.73495D Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.8FW8RA Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.C2PBT1 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ULR4NL Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UR6QZG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.URE69N Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZFWV5X Arachis hypogaea
AT2G46320 Arabidopsis thaliana
AT4G27940 Arabidopsis thaliana
ATR0099G005 Amborella trichopoda
ATR1100G004 Amborella trichopoda
Atru.chr1.272 Acer truncatum
Atru.chr1.273 Acer truncatum
Atru.chr5.620 Acer truncatum
AUR62004450 Chenopodium quinoa
AUR62006158 Chenopodium quinoa
AUR62019331 Chenopodium quinoa
AUR62023500 Chenopodium quinoa
BcaB01g03225 Brassica carinata
BcaB03g12547 Brassica carinata
BcaC02g12699 Brassica carinata
BcaC02g12817 Brassica carinata
BcaC07g38298 Brassica carinata
BcaC09g50527 Brassica carinata
BcaNung01609 Brassica carinata
BolC1t02385H Brassica oleracea
BolC3t12571H Brassica oleracea
BolC4t21818H Brassica oleracea
BraA01t01874Z Brassica rapa
BraA05t19144Z Brassica rapa
BraA08t33989Z Brassica rapa
C01p24290 Brassica napus
C01p24310 Brassica napus
C01p24330 Brassica napus
C01p24350 Brassica napus
C01p24370 Brassica napus
C01p24390 Brassica napus
C04p01660 Brassica napus
C08p10420 Brassica napus
CAN.G108.24 Capsicum annuum
CAN.G986.44 Capsicum annuum
CANSAT21G2441 Cannabis sativa
CANSAT56G0273 Cannabis sativa
CARHR141600 Cardamine hirsuta
CARHR235630 Cardamine hirsuta
Carub.0004s2902 Capsella rubella
Carub.0007s1289 Capsella rubella
Ca_09492_v3 Cicer arietinum L.
Ca_16672_v3 Cicer arietinum L.
CBR_g16850 Chara braunii
Cc00_g14240 Coffea canephora
Cc02_g01920 Coffea canephora
CDE04G0599 Ceratophyllum demersum
CDE10G1155 Ceratophyllum demersum
Cfa003835 Carpinus fangiana
Cfa016359 Carpinus fangiana
Cfa025774 Carpinus fangiana
Ciclev10005073m.g Citrus clementina
Ciclev10006459m.g Citrus clementina
Ciclev10021414m.g Citrus clementina
CiPaw.01G072000 Carya illinoinensis
CiPaw.05G258100 Carya illinoinensis
ClCG01G000600 Citrullus lanatus
ClCG05G001080 Citrullus lanatus
COL.COLO4_06333 Corchorus olitorius
COL.COLO4_06334 Corchorus olitorius
COL.COLO4_35660 Corchorus olitorius
Cpa.g.sc194.10 Carica papaya
Cpa.g.sc194.11 Carica papaya
Cpa.g.sc3.47 Carica papaya
Cre06.g267800 Chlamydomonas reinhardtii
CsaV3_3G008410 Cucumis sativus L.
CsaV3_5G000700 Cucumis sativus L.
CSS0005115 Camellia sinensis var. sinensis
CSS0017256 Camellia sinensis var. sinensis
DCAR_006963 Daucus carota
DCAR_014530 Daucus carota
DCAR_020299 Daucus carota
Dinv28339 Davidia involucrata
Dinv32553 Davidia involucrata
Dinv35304 Davidia involucrata
Dinv43893 Davidia involucrata
Duzib068G0165 Durio zibethinus
Duzib084G0365 Durio zibethinus
Duzib133G0890 Durio zibethinus
Duzib205G0270 Durio zibethinus
ECA232G2330 Erigeron canadensis
ECA236G3071 Erigeron canadensis
EL10Ac1g00314 Beta vulgaris
EL10Ac3g05351 Beta vulgaris
Eucgr.D02346 Eucalyptus grandis
Eucgr.K00326 Eucalyptus grandis
FAN01G1704 Fragaria x ananassa
FAN01G1731 Fragaria x ananassa
FAN03G0637 Fragaria x ananassa
FAN03G3003 Fragaria x ananassa
FAN06G0020 Fragaria x ananassa
FAN06G1084 Fragaria x ananassa
FAN06G3005 Fragaria x ananassa
FAN06G3560 Fragaria x ananassa
FAN09G2995 Fragaria x ananassa
FAN10G0651 Fragaria x ananassa
FAN10G0709 Fragaria x ananassa
FAN10G0776 Fragaria x ananassa
FAN10G2841 Fragaria x ananassa
FAN13G1581 Fragaria x ananassa
FAN15G3160 Fragaria x ananassa
FvH4_7g15880 Fragaria vesca
FvH4_7g30980 Fragaria vesca
Glyma.03G255600 Glycine max
Glyma.04G238600 Glycine max
Glyma.06G125200 Glycine max
Glyma.19G253200 Glycine max
Gohir.A08G097786 Gossypium hirsutum
Gohir.A11G094600 Gossypium hirsutum
Gohir.A12G252000 Gossypium hirsutum
Gohir.D11G099600 Gossypium hirsutum
Gohir.D12G252900 Gossypium hirsutum
Gohir.D12G253500 Gossypium hirsutum
Gorai.004G115600 Gossypium raimondii
Gorai.007G105800 Gossypium raimondii
Gorai.008G271000 Gossypium raimondii
GSVIVG01027048001 Vitis vinifera
GSVIVG01028734001 Vitis vinifera
HanXRQChr04g0121011 Helianthus annuus
HanXRQChr04g0121021 Helianthus annuus
HanXRQChr07g0207161 Helianthus annuus
HanXRQChr14g0462821 Helianthus annuus
Haze_00108 Corylus avellana
Haze_15619 Corylus avellana
Hma1.2p1_0022F.1_g014655 Hydrangea macrophylla
Hma1.2p1_0022F.1_g014670 Hydrangea macrophylla
Hma1.2p1_0142F.1_g064010 Hydrangea macrophylla
Hma1.2p1_0384F.1_g141060 Hydrangea macrophylla
Hma1.2p1_3195F.1_g333860 Hydrangea macrophylla
HPP92_008643 Vanilla planifolia
HPP92_008766 Vanilla planifolia
HPP92_009160 Vanilla planifolia
Hund04832 Selenicereus undatus
Hund16695 Selenicereus undatus
Hund27222 Selenicereus undatus
Lalb_Chr04g0261741 Lupinus albus
Lalb_Chr08g0240621 Lupinus albus
Lj1g0008272 Lotus japonicus
Lj1g0020368 Lotus japonicus
Lj3A911T23 Lonicera japonica
Lj7A504T53 Lonicera japonica
Lsat_1_v5_gn_0_45920 Lactuca sativa
Lsat_1_v5_gn_1_93041 Lactuca sativa
Lsat_1_v5_gn_2_134241 Lactuca sativa
Lsat_1_v5_gn_2_81941 Lactuca sativa
Lsat_1_v5_gn_3_139060 Lactuca sativa
Lsat_1_v5_gn_3_6341 Lactuca sativa
Lsat_1_v5_gn_5_177020 Lactuca sativa
Lsat_1_v5_gn_6_44561 Lactuca sativa
Lsat_1_v5_gn_7_1880 Lactuca sativa
Lsat_1_v5_gn_7_39920 Lactuca sativa
Lsat_1_v5_gn_8_136141 Lactuca sativa
Manes.01G249200 Manihot esculenta
Manes.06G156800 Manihot esculenta
Mapoly0008s0066 Marchantia polymorpha
Mapoly0029s0133 Marchantia polymorpha
Mapoly1502s0001 Marchantia polymorpha
MBI06_g32760_MAGBIO Magnolia biondii
MCO09G301 Micromonas commoda
MD01G1075800 Malus domestica
MD01G1214800 Malus domestica
MD07G1144600 Malus domestica
MD07G1284500 Malus domestica
Medtr3g090820 Medicago truncatula
Medtr7g117030 Medicago truncatula
MELO3C005868.2 Cucumis melo
MELO3C006060.2 Cucumis melo
Migut.B01834 Erythranthe guttata
Migut.F00246 Erythranthe guttata
Migut.F01052 Erythranthe guttata
Nitab4.5_0000305g0150 Nicotiana tabacum
Nitab4.5_0000473g0120 Nicotiana tabacum
Nitab4.5_0002589g0020 Nicotiana tabacum
Nitab4.5_0009232g0030 Nicotiana tabacum
Nn1g01797 Nelumbo nucifera
Nn3g19108 Nelumbo nucifera
Oeu007846.2 Olea europaea
Oeu036886.3 Olea europaea
Oeu049099.1 Olea europaea
Os01g0224400 Oryza sativa ssp. japonica
Os08g0386800 Oryza sativa ssp. japonica
Peaxi162Scf00904g00323 Petunia axillaris
Peaxi162Scf01012g00124 Petunia axillaris
PGR031G3537 Punica granatum
PGR042G2537 Punica granatum
PGR042G3738 Punica granatum
PGSC0003DMG400000092 Solanum tuberosum
PGSC0003DMG400009071 Solanum tuberosum
Phvul.006G110300 Phaseolus vulgaris
Phvul.009G137100 Phaseolus vulgaris
Potri.002G167700 Populus trichocarpa
Potri.012G032100 Populus trichocarpa
Potri.015G022700 Populus trichocarpa
Pp3c24_19780 Physcomitrium patens
Pp3c8_22470 Physcomitrium patens
PRCOL_00006239 Prasinoderma coloniale
Prupe.2G183400 Prunus persica
Prupe.2G306700 Prunus persica
Psat3g004160 Pisum sativum
Psat5g079880 Pisum sativum
PSO063G1560 Papaver somniferum
PSO170G0488 Papaver somniferum
PSO384G4891 Papaver somniferum
QL04p058642 Quercus lobata
QL04p059435 Quercus lobata
QL04p059444 Quercus lobata
QL09p011009 Quercus lobata
RcHm_v2.0_Chr1g0358701 Rosa chinensis
RcHm_v2.0_Chr1g0380061 Rosa chinensis
RcHm_v2.0_Chr3g0487621 Rosa chinensis
Rhsim03G0198400 Rhododendron simsii
Rhsim07G0006900 Rhododendron simsii
Rhsim09G0203600 Rhododendron simsii
Sabra02G0144200 Salix brachista
Sabra12G0021500 Salix brachista
Sabra15G0017100 Salix brachista
SalBow2G0831 Salvia bowleyana
SalBow5G2169 Salvia bowleyana
Sc13g0009570 Simmondsia chinensis
Sc26g0000740 Simmondsia chinensis
Sed0000085 Sechium edule
Sed0019781 Sechium edule
Sed0021545 Sechium edule
Sed0027386 Sechium edule
SEGI_13596 Sequoiadendron giganteum
SEGI_14031 Sequoiadendron giganteum
SEGI_14068 Sequoiadendron giganteum
SEGI_36539 Sequoiadendron giganteum
SGA_v2.0_scaffold55G19733 Striga asiatica
SGA_v2.0_scaffold5G02986 Striga asiatica
SMO169G0198 Selaginella moellendorffii
Solyc01g095510.3 Solanum lycopersicum
Solyc03g007430.3 Solanum lycopersicum
Sopen01g039260 Solanum pennellii
Sopen03g003390 Solanum pennellii
Sp4g28360 Schrenkiella parvula
Sp7g25900 Schrenkiella parvula
TAR374G0144 Trochodendron aralioides
TAR375G1038 Trochodendron aralioides
TAR636G1374 Trochodendron aralioides
THA.LOC104800286 Tarenaya hassleriana
THA.LOC104817335 Tarenaya hassleriana
THA.LOC104825133 Tarenaya hassleriana
Thecc.01G347600 Theobroma cacao
Thecc.03G192300 Theobroma cacao
Thhalv10001514m.g Eutrema salsugineum
Thhalv10025301m.g Eutrema salsugineum
TPR.G17284 Trifolium pratense
TPR.G39720 Trifolium pratense
TPR.G4782 Trifolium pratense
TPR.G9389 Trifolium pratense
TWI14G1422 Tripterygium wilfordii
TWI39G0815 Tripterygium wilfordii
TWI59G1056 Tripterygium wilfordii
unitig_90.g27529 Utricularia gibba
vmacro06578 Vaccinium macrocarpon
vmacro10104 Vaccinium macrocarpon
vmacro10105 Vaccinium macrocarpon
vmacro13147 Vaccinium macrocarpon
vmacro13194 Vaccinium macrocarpon
VMungo0540G0043 Vigna mungo
VMungo1309G0326 Vigna mungo
Zm00001eb042050 Zea mays
Zm00001eb178590 Zea mays
Zm00001eb434240 Zea mays

User provided reference genes

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