Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p01180 Brassica napus
A03p05170 Brassica napus
A06p45220 Brassica napus
A08p13230 Brassica napus
A09p22910 Brassica napus
A10p25980 Brassica napus
Aa31LG3G15460 Aethionema arabicum
Aa31LG6G300 Aethionema arabicum
Aa31sc198G20 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.2447 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.1767 Anthoceros agrestis
Actinidia10857 Actinidia chinensis
Actinidia16217 Actinidia chinensis
Ah.05g174260 Amaranthus hybridus
AL3G29130 Arabidopsis lyrata
AL6G22500 Arabidopsis lyrata
AL7G37060 Arabidopsis lyrata
AL8G10840 Arabidopsis lyrata
Aqoxy3G02695 Aquilegia oxysepala
Aqoxy7G03961 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0UR0S2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.171W8J Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.D3JFX3 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Q4J45C Arachis hypogaea
AT1G24240 Arabidopsis thaliana
AT4G11630 Arabidopsis thaliana
AT4G17560 Arabidopsis thaliana
AT5G11750 Arabidopsis thaliana
AT5G47190 Arabidopsis thaliana
ATR0057G012 Amborella trichopoda
ATR0665G091 Amborella trichopoda
Atru.chr9.1227 Acer truncatum
Atru.chr9.2591 Acer truncatum
AUR62004210 Chenopodium quinoa
AUR62007152 Chenopodium quinoa
AUR62008066 Chenopodium quinoa
AUR62013638 Chenopodium quinoa
AUR62018859 Chenopodium quinoa
AUR62028643 Chenopodium quinoa
BcaB01g05457 Brassica carinata
BcaB04g18428 Brassica carinata
BcaB04g19830 Brassica carinata
BcaB07g30788 Brassica carinata
BcaB08g37029 Brassica carinata
BcaC04g19197 Brassica carinata
BcaC04g21641 Brassica carinata
BcaC06g31409 Brassica carinata
BcaC06g34278 Brassica carinata
BcaC07g38088 Brassica carinata
BcaNung02655 Brassica carinata
BolC3t13108H Brassica oleracea
BolC7t43629H Brassica oleracea
BolC8t48502H Brassica oleracea
BolC9t55812H Brassica oleracea
BolC9t59334H Brassica oleracea
BraA02t05097Z Brassica rapa
BraA03t09856Z Brassica rapa
BraA06t27392Z Brassica rapa
BraA08t33306Z Brassica rapa
BraA09t37892Z Brassica rapa
BraA10t44660Z Brassica rapa
C03p05970 Brassica napus
C07p30880 Brassica napus
C09p29480 Brassica napus
C09p65060 Brassica napus
CAN.G282.40 Capsicum annuum
CAN.G761.21 Capsicum annuum
CANSAT21G2339 Cannabis sativa
CANSAT64G2646 Cannabis sativa
CARHR174170 Cardamine hirsuta
CARHR201460 Cardamine hirsuta
CARHR224260 Cardamine hirsuta
Carub.0006s1028 Capsella rubella
Carub.0007s2383 Capsella rubella
Carub.0008s0055 Capsella rubella
Ca_03374_v3 Cicer arietinum L.
Ca_20195_v3 Cicer arietinum L.
Ca_24606_v3 Cicer arietinum L.
Ca_28857_v3 Cicer arietinum L.
CBR_g51380 Chara braunii
Cc04_g11410 Coffea canephora
Cc08_g11490 Coffea canephora
CDE04G0585 Ceratophyllum demersum
CDE06G0567 Ceratophyllum demersum
CDE12G0112 Ceratophyllum demersum
CDE12G0417 Ceratophyllum demersum
Cfa012671 Carpinus fangiana
Cfa015569 Carpinus fangiana
Cfa023824 Carpinus fangiana
Ciclev10021998m.g Citrus clementina
Ciclev10022242m.g Citrus clementina
CiPaw.06G091400 Carya illinoinensis
CiPaw.12G047500 Carya illinoinensis
ClCG01G013640 Citrullus lanatus
ClCG10G002370 Citrullus lanatus
COL.COLO4_21685 Corchorus olitorius
COL.COLO4_32207 Corchorus olitorius
Cpa.g.sc59.127 Carica papaya
Cpa.g.sc89.6 Carica papaya
Cre07.g322500 Chlamydomonas reinhardtii
Cre17.g734450 Chlamydomonas reinhardtii
CsaV3_3G002360 Cucumis sativus L.
CSS0000839 Camellia sinensis var. sinensis
CSS0012994 Camellia sinensis var. sinensis
CSS0020221 Camellia sinensis var. sinensis
DCAR_008336 Daucus carota
DCAR_016450 Daucus carota
DCAR_026178 Daucus carota
Dinv11485 Davidia involucrata
Dinv21690 Davidia involucrata
Dinv28863 Davidia involucrata
Dinv33811 Davidia involucrata
Duzib205G0024 Durio zibethinus
Duzib205G0484 Durio zibethinus
ECA232G0941 Erigeron canadensis
ECA233G4023 Erigeron canadensis
ECA248G3964 Erigeron canadensis
EL10Ac1g00885 Beta vulgaris
EL10Ac5g12288 Beta vulgaris
Eucgr.B00214 Eucalyptus grandis
Eucgr.D02125 Eucalyptus grandis
FAN04G2356 Fragaria x ananassa
FAN04G3259 Fragaria x ananassa
FAN08G2480 Fragaria x ananassa
FAN08G3155 Fragaria x ananassa
FAN13G0475 Fragaria x ananassa
FAN13G1044 Fragaria x ananassa
FAN18G1540 Fragaria x ananassa
FAN18G4224 Fragaria x ananassa
FvH4_5g06380 Fragaria vesca
FvH4_5g20190 Fragaria vesca
Glyma.01G205400 Glycine max
Glyma.08G265900 Glycine max
Glyma.11G037500 Glycine max
Glyma.18G078700 Glycine max
Gohir.A03G005000 Gossypium hirsutum
Gohir.A07G056300 Gossypium hirsutum
Gohir.A12G185350 Gossypium hirsutum
Gohir.D03G167600 Gossypium hirsutum
Gohir.D07G060600 Gossypium hirsutum
Gohir.D12G188228 Gossypium hirsutum
Gorai.001G064300 Gossypium raimondii
Gorai.003G177300 Gossypium raimondii
Gorai.008G201800 Gossypium raimondii
Gorai.009G355500 Gossypium raimondii
GSVIVG01002112001 Vitis vinifera
GSVIVG01007636001 Vitis vinifera
HanXRQChr11g0332801 Helianthus annuus
HanXRQChr16g0504741 Helianthus annuus
Haze_07976 Corylus avellana
Haze_11924 Corylus avellana
Haze_11976 Corylus avellana
Haze_17593 Corylus avellana
Hma1.2p1_0221F.1_g093080 Hydrangea macrophylla
Hma1.2p1_0840F.1_g226490 Hydrangea macrophylla
HPP92_014888 Vanilla planifolia
HPP92_014894 Vanilla planifolia
HPP92_022648 Vanilla planifolia
HPP92_022668 Vanilla planifolia
Hund14497 Selenicereus undatus
Hund17023 Selenicereus undatus
Lalb_Chr05g0214251 Lupinus albus
Lalb_Chr09g0324221 Lupinus albus
Lalb_Chr25g0286841 Lupinus albus
Lj1A261T33 Lonicera japonica
Lj2g0010049 Lotus japonicus
Lj6g0017256 Lotus japonicus
Lj8A275G68 Lonicera japonica
Lsat_1_v5_gn_4_77441 Lactuca sativa
Lsat_1_v5_gn_6_66160 Lactuca sativa
Manes.01G087050 Manihot esculenta
Manes.06G111150 Manihot esculenta
Manes.14G060000 Manihot esculenta
Mapoly0007s0262 Marchantia polymorpha
MBI09_g37134_MAGBIO Magnolia biondii
MBI17_g44276_MAGBIO Magnolia biondii
MCO12G149 Micromonas commoda
MCO13G120 Micromonas commoda
MD04G1051500 Malus domestica
MD06G1048600 Malus domestica
MD06G1048700 Malus domestica
MD06G1165200 Malus domestica
MD14G1170700 Malus domestica
Medtr3g058620 Medicago truncatula
Medtr5g013300 Medicago truncatula
MELO3C004891.2 Cucumis melo
MELO3C013906.2 Cucumis melo
Migut.A01052 Erythranthe guttata
Migut.F01248 Erythranthe guttata
Migut.O00165 Erythranthe guttata
MSTRG.11501 Avicennia marina
MSTRG.14262 Avicennia marina
Nitab4.5_0000069g0090 Nicotiana tabacum
Nitab4.5_0000500g0090 Nicotiana tabacum
Nitab4.5_0007628g0020 Nicotiana tabacum
Nitab4.5_0009336g0020 Nicotiana tabacum
Nn1g00810 Nelumbo nucifera
Nn1g09140 Nelumbo nucifera
Nn6g33794 Nelumbo nucifera
Nn7g38397 Nelumbo nucifera
Oeu017034.2 Olea europaea
Oeu040866.1 Olea europaea
Os02g0205000 Oryza sativa ssp. japonica
Os02g0524300 Oryza sativa ssp. japonica
Os02g0652600 Oryza sativa ssp. japonica
Peaxi162Scf00021g02521 Petunia axillaris
Peaxi162Scf00446g00212 Petunia axillaris
PGR031G2217 Punica granatum
PGR083G1112 Punica granatum
PGSC0003DMG400026253 Solanum tuberosum
Phvul.002G001200 Phaseolus vulgaris
Phvul.006G055700 Phaseolus vulgaris
Potri.001G152200 Populus trichocarpa
Potri.012G086800 Populus trichocarpa
Pp3c20_16950 Physcomitrium patens
Pp3c23_6090 Physcomitrium patens
Pp3c24_12530 Physcomitrium patens
PRCOL_00005784 Prasinoderma coloniale
Prupe.5G058800 Prunus persica
Prupe.5G164800 Prunus persica
Psat2g176160 Pisum sativum
Psat7g123320 Pisum sativum
PSO017G4224 Papaver somniferum
PSO063G0733 Papaver somniferum
PSO063G2688 Papaver somniferum
PSO339G4413 Papaver somniferum
PSO675G6677 Papaver somniferum
PSO782G4747 Papaver somniferum
QL03p071250 Quercus lobata
QL03p071280 Quercus lobata
QL10p006794 Quercus lobata
QL12p009320 Quercus lobata
RcHm_v2.0_Chr1g0313261 Rosa chinensis
RcHm_v2.0_Chr7g0192431 Rosa chinensis
RcHm_v2.0_Chr7g0192461 Rosa chinensis
RcHm_v2.0_Chr7g0205151 Rosa chinensis
RcHm_v2.0_Chr7g0205251 Rosa chinensis
Rhsim01G0251600 Rhododendron simsii
Rhsim12G0168300 Rhododendron simsii
Sabra01G0122000 Salix brachista
Sabra03G0053100 Salix brachista
Sabra12G0062200 Salix brachista
Sabra15G0107600 Salix brachista
SalBow1G4870 Salvia bowleyana
SalBow5G4275 Salvia bowleyana
Sc01g0008100 Simmondsia chinensis
Sc13g0003620 Simmondsia chinensis
Sed0004468 Sechium edule
Sed0005556 Sechium edule
Sed0010894 Sechium edule
SEGI_10383 Sequoiadendron giganteum
SEGI_18760 Sequoiadendron giganteum
SEGI_23439 Sequoiadendron giganteum
SEGI_39712 Sequoiadendron giganteum
SGA_v2.0_scaffold146G36225 Striga asiatica
SGA_v2.0_scaffold25G10794 Striga asiatica
SMO356G0008 Selaginella moellendorffii
SMO358G0160 Selaginella moellendorffii
Solyc01g008340.3 Solanum lycopersicum
Solyc08g078010.3 Solanum lycopersicum
Sopen01g003860 Solanum pennellii
Sopen08g026520 Solanum pennellii
Sp2g11990 Schrenkiella parvula
Sp6g31850 Schrenkiella parvula
Sp7g16600 Schrenkiella parvula
TAR374G1207 Trochodendron aralioides
TAR374G1593 Trochodendron aralioides
TAR374G1675 Trochodendron aralioides
TAR375G0332 Trochodendron aralioides
THA.LOC104806036 Tarenaya hassleriana
THA.LOC104806678 Tarenaya hassleriana
THA.LOC104817995 Tarenaya hassleriana
THA.LOC104824989 Tarenaya hassleriana
Thecc.03G115800 Theobroma cacao
Thecc.03G243100 Theobroma cacao
Thhalv10001011m.g Eutrema salsugineum
Thhalv10014577m.g Eutrema salsugineum
Thhalv10026152m.g Eutrema salsugineum
TPR.G30742 Trifolium pratense
TPR.G33014 Trifolium pratense
TWI23G0110 Tripterygium wilfordii
TWI60G0936 Tripterygium wilfordii
TWI81G0475 Tripterygium wilfordii
unitig_0.g1422 Utricularia gibba
unitig_21.g20946 Utricularia gibba
unitig_61.g26471 Utricularia gibba
vmacro14131 Vaccinium macrocarpon
vmacro16647 Vaccinium macrocarpon
vmacro16648 Vaccinium macrocarpon
VMungo0464G1085 Vigna mungo
VMungo0540G0960 Vigna mungo
Zm00001eb174060 Zea mays
Zm00001eb249160 Zea mays
Zm00001eb260530 Zea mays

User provided reference genes

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