Gene: AT4G17560

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT4G17560
  • Transcript Identifier AT4G17560.1
  • Gene Type Coding gene
  • Location Chr4 : 9780343-9781752 : positive

Gene Family Information

  • ID HOM05D002294
  • #Genes/#Species 294/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT4G17560.1
  • uniprot Q8W463

Descriptions

  • Description Ribosomal protein L19 family protein
  • Computational description Ribosomal protein L19 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, chloroplast stroma, chloroplast, membrane, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L19 (InterPro:IPR001857); BEST Arabidopsis thaliana protein match is: Ribosomal protein L19 family protein (TAIR:AT5G47190.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006412
IEA
Gene Ontologytranslation
GO:0006412
IEA
InterProtranslation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003735
IEA
GOA Databasestructural constituent of ribosome
GO:0003735
IBA
Gene Ontologystructural constituent of ribosome1
GO:0003735
IEA
InterProstructural constituent of ribosome
GO:0019843
IEA
GOA DatabaserRNA binding
GO:0003723
IEA
GOA DatabaseRNA binding
GO:0003729
IDA
Gene OntologymRNA binding2

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009941
IDA
GOA Databasechloroplast envelope
GO:0009941
HDA
Gene Ontologychloroplast envelope3
GO:0005840
IEA
GOA Databaseribosome
GO:0005840
IEA
InterProribosome
GO:0009536
IEA
GOA Databaseplastid
GO:0009507
IDA
IEA
GOA Databasechloroplast
GO:0009507
HDA
ISM
Gene Ontologychloroplast4
GO:0009570
IDA
GOA Databasechloroplast stroma
GO:0009570
HDA
Gene Ontologychloroplast stroma5
GO:0005829
HDA
Gene Ontologycytosol6

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001857 Ribosomal protein L19
IPR008991 Translation protein SH3-like domain superfamily
IPR038657 Ribosomal protein L19 superfamily
Mapman id Description
17.7.2.1.17 Protein biosynthesis.organelle machinery.plastidial ribosome.large ribosomal subunit proteome.component psRPL19