Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p36280 Brassica napus
A05p20960 Brassica napus
A05p25660 Brassica napus
A05p31670 Brassica napus
A06p04290 Brassica napus
A06p14150 Brassica napus
A08p04560 Brassica napus
A08p10840 Brassica napus
A08p30560 Brassica napus
A09p60100 Brassica napus
Aa31LG4G4000 Aethionema arabicum
Aa31LG7G2990 Aethionema arabicum
Aa31LG8G4970 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.1071 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.958 Anthoceros agrestis
Actinidia18909 Actinidia chinensis
Actinidia18910 Actinidia chinensis
Actinidia35111 Actinidia chinensis
Ah.02g115460 Amaranthus hybridus
Ah.12g062430 Amaranthus hybridus
AL1G30460 Arabidopsis lyrata
AL1G55290 Arabidopsis lyrata
AL3G31280 Arabidopsis lyrata
Aqoxy3G00143 Aquilegia oxysepala
Aqoxy3G03970 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.4NZ6PL Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.81A43L Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ERE2QZ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UXG27B Arachis hypogaea
AT1G18080 Arabidopsis thaliana
AT1G48630 Arabidopsis thaliana
AT3G18130 Arabidopsis thaliana
ATR0326G054 Amborella trichopoda
Atru.chr9.953 Acer truncatum
AUR62029956 Chenopodium quinoa
AUR62033738 Chenopodium quinoa
BcaB04g17391 Brassica carinata
BcaB04g20796 Brassica carinata
BcaB07g31831 Brassica carinata
BcaB07g33726 Brassica carinata
BcaC03g14017 Brassica carinata
BcaC05g25702 Brassica carinata
BcaC05g27559 Brassica carinata
BcaC07g37117 Brassica carinata
BcaC07g37123 Brassica carinata
BcaC07g38907 Brassica carinata
BcaC07g41345 Brassica carinata
BcaC08g43071 Brassica carinata
BcaC09g48768 Brassica carinata
BolC1t04571H Brassica oleracea
BolC2t07355H Brassica oleracea
BolC2t10280H Brassica oleracea
BolC2t10281H Brassica oleracea
BolC5t30338H Brassica oleracea
BolC5t32254H Brassica oleracea
BolC5t33512H Brassica oleracea
BolC6t35460H Brassica oleracea
BolC8t47289H Brassica oleracea
BolC8t47299H Brassica oleracea
BolC8t49471H Brassica oleracea
BolC8t51900H Brassica oleracea
BraA01t03701Z Brassica rapa
BraA02t08492Z Brassica rapa
BraA05t21001Z Brassica rapa
BraA05t22000Z Brassica rapa
BraA06t23633Z Brassica rapa
BraA06t24547Z Brassica rapa
BraA06t27717Z Brassica rapa
BraA08t32484Z Brassica rapa
BraA08t33080Z Brassica rapa
BraA08t34988Z Brassica rapa
BraA09t41379Z Brassica rapa
C01p46090 Brassica napus
C01p46640 Brassica napus
C05p16410 Brassica napus
C05p35420 Brassica napus
C05p47440 Brassica napus
C05p48050 Brassica napus
C06p03270 Brassica napus
C08p04890 Brassica napus
C08p04930 Brassica napus
C08p18410 Brassica napus
C08p43540 Brassica napus
CAN.G1129.30 Capsicum annuum
CAN.G423.20 Capsicum annuum
CANSAT80G1778 Cannabis sativa
CANSAT80G2028 Cannabis sativa
CARHR018660 Cardamine hirsuta
CARHR038260 Cardamine hirsuta
CARHR093430 Cardamine hirsuta
Carub.0001s1775 Capsella rubella
Carub.0001s3777 Capsella rubella
Carub.0003s1785 Capsella rubella
Ca_17219_v3 Cicer arietinum L.
CBR_g74640 Chara braunii
Cc04_g06620 Coffea canephora
CDE06G0785 Ceratophyllum demersum
CDE07G1387 Ceratophyllum demersum
Cfa019697 Carpinus fangiana
Cfa021869 Carpinus fangiana
Ciclev10008909m.g Citrus clementina
CiPaw.15G139200 Carya illinoinensis
CiPaw.16G090900 Carya illinoinensis
ClCG06G014460 Citrullus lanatus
COL.COLO4_21589 Corchorus olitorius
COL.COLO4_32435 Corchorus olitorius
Cpa.g.sc3.429 Carica papaya
Cre06.g278222 Chlamydomonas reinhardtii
CsaV3_1G004120 Cucumis sativus L.
CSS0002939 Camellia sinensis var. sinensis
CSS0015536 Camellia sinensis var. sinensis
CSS0022025 Camellia sinensis var. sinensis
CSS0037013 Camellia sinensis var. sinensis
CSS0043545 Camellia sinensis var. sinensis
CSS0045682 Camellia sinensis var. sinensis
DCAR_025380 Daucus carota
Dinv24642 Davidia involucrata
Dinv29938 Davidia involucrata
Duzib068G0723 Durio zibethinus
Duzib084G0288 Durio zibethinus
Duzib205G1910 Durio zibethinus
ECA233G2765 Erigeron canadensis
ECA238G2805 Erigeron canadensis
EL10Ac5g11523 Beta vulgaris
Eucgr.B00856 Eucalyptus grandis
Eucgr.K02261 Eucalyptus grandis
FAN02G3000 Fragaria x ananassa
FAN03G2773 Fragaria x ananassa
FAN04G1522 Fragaria x ananassa
FAN08G2209 Fragaria x ananassa
FAN13G3058 Fragaria x ananassa
FAN14G3023 Fragaria x ananassa
FAN14G3386 Fragaria x ananassa
FAN17G2423 Fragaria x ananassa
FAN18G4183 Fragaria x ananassa
FAN20G1569 Fragaria x ananassa
FvH4_3g43980 Fragaria vesca
FvH4_3g43990 Fragaria vesca
FvH4_4g20090 Fragaria vesca
FvH4_5g17060 Fragaria vesca
FvH4_5g24161 Fragaria vesca
FvH4_5g24170 Fragaria vesca
Glyma.05G243800 Glycine max
Glyma.07G100800 Glycine max
Glyma.08G051600 Glycine max
Glyma.09G177976 Glycine max
Gohir.A07G061500 Gossypium hirsutum
Gohir.A09G174000 Gossypium hirsutum
Gohir.A12G268200 Gossypium hirsutum
Gohir.D07G066200 Gossypium hirsutum
Gohir.D09G171000 Gossypium hirsutum
Gohir.D12G268600 Gossypium hirsutum
Gorai.001G069800 Gossypium raimondii
Gorai.006G192600 Gossypium raimondii
Gorai.008G288800 Gossypium raimondii
GSVIVG01008395001 Vitis vinifera
HanXRQChr10g0297151 Helianthus annuus
HanXRQChr14g0432741 Helianthus annuus
Haze_18791 Corylus avellana
Haze_26718 Corylus avellana
Hma1.2p1_0669F.1_g200320 Hydrangea macrophylla
HPP92_004830 Vanilla planifolia
HPP92_027371 Vanilla planifolia
Hund02334 Selenicereus undatus
Hund10302 Selenicereus undatus
Lalb_Chr05g0221861 Lupinus albus
Lalb_Chr09g0330511 Lupinus albus
Lalb_Chr14g0370791 Lupinus albus
Lalb_Chr22g0353321 Lupinus albus
Lalb_Chr24g0398021 Lupinus albus
Lj4g0012771 Lotus japonicus
Lj5A154G67 Lonicera japonica
Lj9C421G19 Lonicera japonica
Lsat_1_v5_gn_1_73780 Lactuca sativa
Lsat_1_v5_gn_2_19401 Lactuca sativa
Lsat_1_v5_gn_2_37841 Lactuca sativa
Lsat_1_v5_gn_3_2481 Lactuca sativa
Lsat_1_v5_gn_4_22280 Lactuca sativa
Lsat_1_v5_gn_4_47400 Lactuca sativa
Lsat_1_v5_gn_4_70881 Lactuca sativa
Lsat_1_v5_gn_8_147661 Lactuca sativa
Lsat_1_v5_gn_8_3580 Lactuca sativa
Manes.06G008400 Manihot esculenta
Manes.14G168700 Manihot esculenta
Mapoly0004s0109 Marchantia polymorpha
MBI10_g07291_MAGBIO Magnolia biondii
MBI16_g32957_MAGBIO Magnolia biondii
MCO06G101 Micromonas commoda
MCO16G482 Micromonas commoda
MD00G1160700 Malus domestica
MD14G1233800 Malus domestica
Medtr8g106790 Medicago truncatula
MELO3C017338.2 Cucumis melo
Migut.D01450 Erythranthe guttata
Migut.I00456 Erythranthe guttata
MSTRG.4561 Avicennia marina
MSTRG.4562 Avicennia marina
MSTRG.9287 Avicennia marina
Nitab4.5_0000150g0090 Nicotiana tabacum
Nitab4.5_0001158g0040 Nicotiana tabacum
Nitab4.5_0003221g0010 Nicotiana tabacum
Nitab4.5_0004037g0010 Nicotiana tabacum
Nitab4.5_0005182g0010 Nicotiana tabacum
Nitab4.5_0012369g0020 Nicotiana tabacum
Nn3g18064 Nelumbo nucifera
Nn4g24087 Nelumbo nucifera
Nn4g24508 Nelumbo nucifera
Nn7g37960 Nelumbo nucifera
Oeu012409.1 Olea europaea
Oeu017508.1 Olea europaea
Oeu031797.1 Olea europaea
Os01g0686800 Oryza sativa ssp. japonica
Os05g0552300 Oryza sativa ssp. japonica
Peaxi162Scf00207g00023 Petunia axillaris
Peaxi162Scf00683g00230 Petunia axillaris
Peaxi162Scf01127g00031 Petunia axillaris
PGR044G2749 Punica granatum
PGSC0003DMG400015829 Solanum tuberosum
PGSC0003DMG400015970 Solanum tuberosum
PGSC0003DMG400028795 Solanum tuberosum
PGSC0003DMG401005658 Solanum tuberosum
Phvul.002G327500 Phaseolus vulgaris
Potri.012G052700 Populus trichocarpa
Potri.015G041600 Populus trichocarpa
Pp3c16_13180 Physcomitrium patens
Pp3c27_6040 Physcomitrium patens
Pp3c5_770 Physcomitrium patens
PRCOL_00006176 Prasinoderma coloniale
Prupe.5G230000 Prunus persica
Psat1g066600 Pisum sativum
Psat6g148200 Pisum sativum
Psat6g202440 Pisum sativum
Psat6g202480 Pisum sativum
Psat7g003840 Pisum sativum
PSO017G5281 Papaver somniferum
PSO063G4286 Papaver somniferum
PSO229G0133 Papaver somniferum
PSO339G3175 Papaver somniferum
PSO478G5044 Papaver somniferum
PSO541G3625 Papaver somniferum
PSO675G7733 Papaver somniferum
QL10p027563 Quercus lobata
RcHm_v2.0_Chr7g0178791 Rosa chinensis
Rhsim07G0079100 Rhododendron simsii
Rhsim08G0129000 Rhododendron simsii
RhsimUnG0064600 Rhododendron simsii
RhsimUnG0064700 Rhododendron simsii
RhsimUnG0145700 Rhododendron simsii
Sabra12G0035100 Salix brachista
Sabra15G0055500 Salix brachista
Sabra15G0063100 Salix brachista
SalBow1G6621 Salvia bowleyana
Sc10g0009330 Simmondsia chinensis
Sc12g0007370 Simmondsia chinensis
Sed0002179 Sechium edule
Sed0005672 Sechium edule
SEGI_17698 Sequoiadendron giganteum
SEGI_29262 Sequoiadendron giganteum
SGA_v2.0_scaffold168G38491 Striga asiatica
SGA_v2.0_scaffold171G38934 Striga asiatica
SMO367G0508 Selaginella moellendorffii
Solyc03g119040.3 Solanum lycopersicum
Solyc06g069010.3 Solanum lycopersicum
Solyc12g040510.2 Solanum lycopersicum
Sopen03g037930 Solanum pennellii
Sopen06g026300 Solanum pennellii
Sopen12g020110 Solanum pennellii
Sp1g16100 Schrenkiella parvula
Sp1g35600 Schrenkiella parvula
Sp3g16240 Schrenkiella parvula
TAR374G1111 Trochodendron aralioides
TAR622G1362 Trochodendron aralioides
THA.LOC104812161 Tarenaya hassleriana
THA.LOC104813915 Tarenaya hassleriana
THA.LOC104820359 Tarenaya hassleriana
THA.LOC104820360 Tarenaya hassleriana
THA.LOC104821835 Tarenaya hassleriana
Thecc.03G048300 Theobroma cacao
Thhalv10008183m.g Eutrema salsugineum
Thhalv10011646m.g Eutrema salsugineum
Thhalv10021128m.g Eutrema salsugineum
TPR.G12981 Trifolium pratense
TPR.G14171 Trifolium pratense
TWI15G0360 Tripterygium wilfordii
TWI60G0185 Tripterygium wilfordii
TWI81G0596 Tripterygium wilfordii
unitig_0.g803 Utricularia gibba
unitig_60.g25805 Utricularia gibba
vmacro13859 Vaccinium macrocarpon
vmacro13860 Vaccinium macrocarpon
vmacro17792 Vaccinium macrocarpon
VMungo0251G1260 Vigna mungo
VMungo0464G1091 Vigna mungo
Zm00001eb294990 Zea mays
Zm00001eb342960 Zea mays

User provided reference genes

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