Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p14000 Brassica napus
Aa31LG2G3520 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.1506 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_117.1507 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.4174 Anthoceros agrestis
Actinidia32171 Actinidia chinensis
Ah.08g216540 Amaranthus hybridus
Ah.08g216550 Amaranthus hybridus
AL2G25500 Arabidopsis lyrata
Aqoxy6G02932 Aquilegia oxysepala
Aqoxy6G02933 Aquilegia oxysepala
Aqoxy6G02934 Aquilegia oxysepala
Aqoxy6G02935 Aquilegia oxysepala
Aqoxy7G03985 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.3D1K9T Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.B3D1QM Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.I4EX6M Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VXKY2I Arachis hypogaea
AT1G67120 Arabidopsis thaliana
ATR0736G011 Amborella trichopoda
ATR0736G169 Amborella trichopoda
ATR0736G170 Amborella trichopoda
Atru.chr1.3813 Acer truncatum
Atru.chr1.3816 Acer truncatum
AUR62001507 Chenopodium quinoa
AUR62009863 Chenopodium quinoa
BcaB03g13736 Brassica carinata
BcaC03g14803 Brassica carinata
BcaC05g27863 Brassica carinata
BcaC07g41079 Brassica carinata
BcaNung06980 Brassica carinata
BolC2t08403H Brassica oleracea
BolC2t08407H Brassica oleracea
BolC2t08408H Brassica oleracea
BolC5t32597H Brassica oleracea
BolC5t32598H Brassica oleracea
BolC5t32599H Brassica oleracea
BolC5t32606H Brassica oleracea
BolC5t32895H Brassica oleracea
BolC8t51649H Brassica oleracea
BraA02t06460Z Brassica rapa
C02p22490 Brassica napus
C02p22530 Brassica napus
C02p22540 Brassica napus
C02p22550 Brassica napus
C02p22560 Brassica napus
C05p38590 Brassica napus
C05p38600 Brassica napus
C05p38660 Brassica napus
C05p38670 Brassica napus
CAN.G1010.9 Capsicum annuum
CANSAT56G0650 Cannabis sativa
CARHR059570 Cardamine hirsuta
Carub.0002s1105 Capsella rubella
Carub.0002s1342 Capsella rubella
Ca_23356_v3 Cicer arietinum L.
CBR_g741 Chara braunii
CBR_g742 Chara braunii
Cc02_g21460 Coffea canephora
Cc04_g01520 Coffea canephora
Cc11_g02690 Coffea canephora
CDE12G0087 Ceratophyllum demersum
CDE12G0416 Ceratophyllum demersum
CDE12G0817 Ceratophyllum demersum
Cfa003549 Carpinus fangiana
Ciclev10024676m.g Citrus clementina
CiPaw.01G221300 Carya illinoinensis
ClCG09G000860 Citrullus lanatus
COL.COLO4_09445 Corchorus olitorius
COL.COLO4_12564 Corchorus olitorius
COL.COLO4_12565 Corchorus olitorius
COL.COLO4_12566 Corchorus olitorius
COL.COLO4_12567 Corchorus olitorius
COL.COLO4_12568 Corchorus olitorius
COL.COLO4_12569 Corchorus olitorius
COL.COLO4_26664 Corchorus olitorius
COL.COLO4_30723 Corchorus olitorius
COL.COLO4_30772 Corchorus olitorius
Cpa.g.sc1872.2 Carica papaya
Cpa.g.sc30.10 Carica papaya
Cpa.g.sc30.11 Carica papaya
Cpa.g.sc30.12 Carica papaya
Cpa.g.sc30.16 Carica papaya
Cpa.g.sc30.17 Carica papaya
Cpa.g.sc30.6 Carica papaya
Cpa.g.sc30.8 Carica papaya
Cre02.g095250 Chlamydomonas reinhardtii
Cre03.g161800 Chlamydomonas reinhardtii
CsaV3_7G034610 Cucumis sativus L.
CSS0023775 Camellia sinensis var. sinensis
DCAR_014031 Daucus carota
Dinv04906 Davidia involucrata
Dinv37884 Davidia involucrata
Dinv37885 Davidia involucrata
Duzib235G1111 Durio zibethinus
ECA067G0001 Erigeron canadensis
ECA067G0003 Erigeron canadensis
ECA232G3855 Erigeron canadensis
ECA232G4141 Erigeron canadensis
EL10Ac7g16387 Beta vulgaris
Eucgr.J02835 Eucalyptus grandis
Eucgr.J02836 Eucalyptus grandis
FAN02G3927 Fragaria x ananassa
FAN05G0510 Fragaria x ananassa
FAN05G3527 Fragaria x ananassa
FAN09G1018 Fragaria x ananassa
FAN14G0930 Fragaria x ananassa
FAN14G4121 Fragaria x ananassa
FvH4_6g28250 Fragaria vesca
FvH4_6g34300 Fragaria vesca
Glyma.06G237366 Glycine max
Glyma.07G035600 Glycine max
Glyma.16G004800 Glycine max
Glyma.19G039050 Glycine max
Gohir.A10G056600 Gossypium hirsutum
Gohir.D10G058500 Gossypium hirsutum
Gorai.011G062600 Gossypium raimondii
GSVIVG01012486001 Vitis vinifera
GSVIVG01016794001 Vitis vinifera
HanXRQChr09g0276661 Helianthus annuus
HanXRQChr14g0434531 Helianthus annuus
HanXRQChr16g0507711 Helianthus annuus
Haze_16005 Corylus avellana
Hma1.2p1_0291F.1_g115290 Hydrangea macrophylla
HPP92_008118 Vanilla planifolia
Hund05750 Selenicereus undatus
Hund05751 Selenicereus undatus
Hund30627 Selenicereus undatus
Lalb_Chr20g0113881 Lupinus albus
Lalb_Chr20g0113891 Lupinus albus
Lalb_Chr20g0113901 Lupinus albus
Lalb_Chr20g0113911 Lupinus albus
Lj3g0006373 Lotus japonicus
Lj5C40G12 Lonicera japonica
Lsat_1_v5_gn_1_113200 Lactuca sativa
Lsat_1_v5_gn_2_73541 Lactuca sativa
Lsat_1_v5_gn_3_35661 Lactuca sativa
Lsat_1_v5_gn_4_89981 Lactuca sativa
Lsat_1_v5_gn_4_95020 Lactuca sativa
Lsat_1_v5_gn_7_1960 Lactuca sativa
Lsat_1_v5_gn_7_1981 Lactuca sativa
Lsat_1_v5_gn_7_50160 Lactuca sativa
Lsat_1_v5_gn_8_57560 Lactuca sativa
Lsat_1_v5_gn_9_82220 Lactuca sativa
Manes.04G142500 Manihot esculenta
Mapoly0033s0024 Marchantia polymorpha
MBI01_g40595_MAGBIO Magnolia biondii
MBI03_g20202_MAGBIO Magnolia biondii
MBI05_g22669_MAGBIO Magnolia biondii
MBI05_g33098_MAGBIO Magnolia biondii
MBI05_g36271_MAGBIO Magnolia biondii
MBI15_g14940_MAGBIO Magnolia biondii
MBI15_g37229_MAGBIO Magnolia biondii
MBI17_g19031_MAGBIO Magnolia biondii
MBI18_g29805_MAGBIO Magnolia biondii
MBI18_g42566_MAGBIO Magnolia biondii
MBI18_g43595_MAGBIO Magnolia biondii
MCO14G006 Micromonas commoda
MCO14G508 Micromonas commoda
MD05G1009600 Malus domestica
Medtr8g018890 Medicago truncatula
Medtr8g019250 Medicago truncatula
MELO3C024369.2 Cucumis melo
Migut.H01763 Erythranthe guttata
MSTRG.10966 Avicennia marina
Nitab4.5_0000433g0190 Nicotiana tabacum
Nitab4.5_0000433g0200 Nicotiana tabacum
Nitab4.5_0000433g0210 Nicotiana tabacum
Nitab4.5_0003025g0020 Nicotiana tabacum
Nitab4.5_0003025g0030 Nicotiana tabacum
Nitab4.5_0003025g0040 Nicotiana tabacum
Nn5g26982 Nelumbo nucifera
Nn8g38745 Nelumbo nucifera
Nn8g39133 Nelumbo nucifera
Nn8g39147 Nelumbo nucifera
Oeu039944.3 Olea europaea
Oeu047969.1 Olea europaea
Os10g0456900 Oryza sativa ssp. japonica
Os10g0456950 Oryza sativa ssp. japonica
Peaxi162Scf00226g00823 Petunia axillaris
Peaxi162Scf00226g00824 Petunia axillaris
PGR142G3590 Punica granatum
PGSC0003DMG400021645 Solanum tuberosum
PGSC0003DMG400044228 Solanum tuberosum
Phvul.010G134100 Phaseolus vulgaris
Potri.017G039100 Populus trichocarpa
Pp3c8_22130 Physcomitrium patens
PRCOL_00003697 Prasinoderma coloniale
Prupe.3G044200 Prunus persica
Psat0s3488g0040 Pisum sativum
Psat0s3488g0080 Pisum sativum
Psat1g148840 Pisum sativum
Psat3g019920 Pisum sativum
Psat4g180280 Pisum sativum
Psat4g184160 Pisum sativum
Psat4g187880 Pisum sativum
PSO144G0138 Papaver somniferum
PSO210G4815 Papaver somniferum
PSO423G0075 Papaver somniferum
QL01p053604 Quercus lobata
QL01p053642 Quercus lobata
QL01p054500 Quercus lobata
QL01p054541 Quercus lobata
QL01p054873 Quercus lobata
QL03p018747 Quercus lobata
QL05p008929 Quercus lobata
QL05p008973 Quercus lobata
QL05p009063 Quercus lobata
QL93p0107_0362 Quercus lobata
QL93p0356_0058 Quercus lobata
QL93p0381_0021 Quercus lobata
RcHm_v2.0_Chr1g0356721 Rosa chinensis
RcHm_v2.0_Chr2g0144641 Rosa chinensis
RcHm_v2.0_Chr3g0467481 Rosa chinensis
Rhsim04G0127600 Rhododendron simsii
Rhsim07G0217300 Rhododendron simsii
Rhsim08G0236800 Rhododendron simsii
Sabra17G0026200 Salix brachista
SalBow4G2096 Salvia bowleyana
SalBow6G4013 Salvia bowleyana
Sc15g0000370 Simmondsia chinensis
Sed0006033 Sechium edule
Sed0013702 Sechium edule
SEGI_08864 Sequoiadendron giganteum
SEGI_09123 Sequoiadendron giganteum
SEGI_12162 Sequoiadendron giganteum
SEGI_14766 Sequoiadendron giganteum
SEGI_19104 Sequoiadendron giganteum
SEGI_22737 Sequoiadendron giganteum
SEGI_22741 Sequoiadendron giganteum
SEGI_23610 Sequoiadendron giganteum
SEGI_24649 Sequoiadendron giganteum
SEGI_24765 Sequoiadendron giganteum
SEGI_27232 Sequoiadendron giganteum
SEGI_29020 Sequoiadendron giganteum
SEGI_33198 Sequoiadendron giganteum
SEGI_35812 Sequoiadendron giganteum
SEGI_39038 Sequoiadendron giganteum
SEGI_39597 Sequoiadendron giganteum
SGA_v2.0_scaffold71G23844 Striga asiatica
SHI16813 Sapria himalayana
SHI16814 Sapria himalayana
SHI16815 Sapria himalayana
SHI16816 Sapria himalayana
SHI16817 Sapria himalayana
SHI16818 Sapria himalayana
SMO141G0084 Selaginella moellendorffii
SMO141G0091 Selaginella moellendorffii
SMO141G0121 Selaginella moellendorffii
SMO141G0255 Selaginella moellendorffii
SMO141G0258 Selaginella moellendorffii
Solyc04g072260.3 Solanum lycopersicum
Solyc04g072270.1 Solanum lycopersicum
Sopen04g028450 Solanum pennellii
Sp5g22050 Schrenkiella parvula
Sp5g22060 Schrenkiella parvula
Sp5g22070 Schrenkiella parvula
TAR371G0164 Trochodendron aralioides
TAR371G0515 Trochodendron aralioides
TAR636G1145 Trochodendron aralioides
TAR636G1163 Trochodendron aralioides
TAR636G1846 Trochodendron aralioides
TAR636G2258 Trochodendron aralioides
TAR636G2809 Trochodendron aralioides
THA.LOC104805560 Tarenaya hassleriana
THA.LOC104807245 Tarenaya hassleriana
Thecc.06G117100 Theobroma cacao
Thhalv10017991m.g Eutrema salsugineum
TPR.G10921 Trifolium pratense
TPR.G20824 Trifolium pratense
TPR.G23043 Trifolium pratense
TPR.G27589 Trifolium pratense
TPR.G29949 Trifolium pratense
TPR.G29953 Trifolium pratense
TPR.G36181 Trifolium pratense
TPR.G39826 Trifolium pratense
TPR.G40383 Trifolium pratense
TPR.G51 Trifolium pratense
TPR.G582 Trifolium pratense
TPR.G9775 Trifolium pratense
TPR.G9777 Trifolium pratense
TPR.G9785 Trifolium pratense
TWI09G1355 Tripterygium wilfordii
unitig_22.g5235 Utricularia gibba
vmacro22216 Vaccinium macrocarpon
vmacro22217 Vaccinium macrocarpon
vmacro22218 Vaccinium macrocarpon
vmacro22219 Vaccinium macrocarpon
VMungo0331G1298 Vigna mungo
VMungo0366G0001 Vigna mungo
VMungo0464G0518 Vigna mungo
VMungo0464G0658 Vigna mungo
VMungo0464G1016 Vigna mungo
VMungo0464G1105 Vigna mungo
VMungo1080G1592 Vigna mungo
VMungo1383G2297 Vigna mungo
Zm00001eb290580 Zea mays

User provided reference genes

Program Settings