Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p66820 Brassica napus
A10p05300 Brassica napus
Aa31LG1G7760 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_369.529 Anthoceros agrestis
Actinidia14351 Actinidia chinensis
Actinidia14352 Actinidia chinensis
Actinidia32936 Actinidia chinensis
Actinidia32937 Actinidia chinensis
Actinidia32938 Actinidia chinensis
Actinidia35887 Actinidia chinensis
Ah.04g150630 Amaranthus hybridus
AL1G16730 Arabidopsis lyrata
Aqoxy1G01987 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.W5M1I0 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XT66D5 Arachis hypogaea
AT1G06720 Arabidopsis thaliana
ATR0317G080 Amborella trichopoda
ATR0317G099 Amborella trichopoda
Atru.chr4.1347 Acer truncatum
AUR62018398 Chenopodium quinoa
AUR62021045 Chenopodium quinoa
AUR62022536 Chenopodium quinoa
BcaC05g24645 Brassica carinata
BcaC07g42051 Brassica carinata
BcaC07g42052 Brassica carinata
BolC5t29262H Brassica oleracea
BolC8t52632H Brassica oleracea
BraA09t42020Z Brassica rapa
BraA10t42795Z Brassica rapa
C05p04900 Brassica napus
C08p51050 Brassica napus
CAN.G134.122 Capsicum annuum
CAN.G134.124 Capsicum annuum
CANSAT54G2648 Cannabis sativa
CARHR006400 Cardamine hirsuta
Carub.0001s0605 Capsella rubella
Ca_20807_v3 Cicer arietinum L.
Cc03_g10880 Coffea canephora
CDE04G3562 Ceratophyllum demersum
CDE06G0089 Ceratophyllum demersum
CDE06G0512 Ceratophyllum demersum
Cfa015221 Carpinus fangiana
Ciclev10018567m.g Citrus clementina
Ciclev10024184m.g Citrus clementina
Ciclev10027707m.g Citrus clementina
Ciclev10027721m.g Citrus clementina
Ciclev10029546m.g Citrus clementina
Ciclev10029939m.g Citrus clementina
Ciclev10030091m.g Citrus clementina
CiPaw.01G173300 Carya illinoinensis
ClCG09G009700 Citrullus lanatus
ClCG09G010650 Citrullus lanatus
COL.COLO4_35570 Corchorus olitorius
Cpa.g.sc9.331 Carica papaya
Cre10.g445600 Chlamydomonas reinhardtii
CsaV3_7G021630 Cucumis sativus L.
CSS0011706 Camellia sinensis var. sinensis
CSS0042856 Camellia sinensis var. sinensis
DCAR_027245 Daucus carota
Dinv07889 Davidia involucrata
Dinv07890 Davidia involucrata
Dinv36883 Davidia involucrata
Dinv44229 Davidia involucrata
Duzib114G0665 Durio zibethinus
ECA233G0320 Erigeron canadensis
ECA233G1092 Erigeron canadensis
ECA236G3424 Erigeron canadensis
EL10Ac3g07289 Beta vulgaris
Eucgr.A00036 Eucalyptus grandis
FAN07G1373 Fragaria x ananassa
FAN12G0585 Fragaria x ananassa
FAN12G3082 Fragaria x ananassa
FAN12G3273 Fragaria x ananassa
FAN17G0610 Fragaria x ananassa
FAN22G2096 Fragaria x ananassa
FvH4_4g10660 Fragaria vesca
Glyma.05G079201 Glycine max
Glyma.11G125100 Glycine max
Glyma.12G049700 Glycine max
Glyma.19G101250 Glycine max
Gohir.A03G041200 Gossypium hirsutum
Gohir.A10G197400 Gossypium hirsutum
Gohir.D03G126900 Gossypium hirsutum
Gohir.D03G126950 Gossypium hirsutum
Gohir.D10G204500 Gossypium hirsutum
Gorai.003G133300 Gossypium raimondii
Gorai.011G229500 Gossypium raimondii
GSVIVG01020936001 Vitis vinifera
GSVIVG01021891001 Vitis vinifera
HanXRQChr14g0454041 Helianthus annuus
HanXRQChr14g0454051 Helianthus annuus
Haze_01398 Corylus avellana
Haze_26692 Corylus avellana
Hma1.2p1_0007F.1_g004970 Hydrangea macrophylla
HPP92_015122 Vanilla planifolia
Hund16448 Selenicereus undatus
Lalb_Chr01g0003051 Lupinus albus
Lalb_Chr01g0003061 Lupinus albus
Lalb_Chr19g0138431 Lupinus albus
Lalb_Chr19g0138441 Lupinus albus
Lalb_Chr19g0138451 Lupinus albus
Lj1A1071T61 Lonicera japonica
Lj1A1071T62 Lonicera japonica
Lj1A1071T63 Lonicera japonica
Lj1g0018031 Lotus japonicus
Lj3g0013974 Lotus japonicus
Lsat_1_v5_gn_3_137821 Lactuca sativa
Lsat_1_v5_gn_6_31421 Lactuca sativa
Manes.09G003400 Manihot esculenta
Mapoly0040s0120 Marchantia polymorpha
MBI04_g09487_MAGBIO Magnolia biondii
MCO01G316 Micromonas commoda
MD00G1071300 Malus domestica
MD00G1152200 Malus domestica
MD03G1154000 Malus domestica
Medtr4g068150 Medicago truncatula
MELO3C013185.2 Cucumis melo
Migut.A00191 Erythranthe guttata
Migut.A00192 Erythranthe guttata
Nitab4.5_0005729g0040 Nicotiana tabacum
Nitab4.5_0009733g0020 Nicotiana tabacum
Nn3g21087 Nelumbo nucifera
Oeu015255.1 Olea europaea
Oeu015256.1 Olea europaea
Oeu023211.3 Olea europaea
Os03g0333100 Oryza sativa ssp. japonica
Peaxi162Scf00282g00128 Petunia axillaris
PGR014G0002 Punica granatum
PGSC0003DMG403019442 Solanum tuberosum
Phvul.010G083000 Phaseolus vulgaris
Phvul.010G087950 Phaseolus vulgaris
Phvul.011G051900 Phaseolus vulgaris
Potri.017G017700 Populus trichocarpa
Pp3c13_14960 Physcomitrium patens
Pp3c3_12630 Physcomitrium patens
Pp3c3_12633 Physcomitrium patens
PRCOL_00006812 Prasinoderma coloniale
Prupe.1G548200 Prunus persica
Prupe.8G069100 Prunus persica
Psat7g208680 Pisum sativum
PSO017G0281 Papaver somniferum
PSO017G0406 Papaver somniferum
PSO017G1206 Papaver somniferum
PSO017G1211 Papaver somniferum
PSO017G1381 Papaver somniferum
PSO017G1730 Papaver somniferum
PSO017G1851 Papaver somniferum
PSO017G2171 Papaver somniferum
PSO017G2413 Papaver somniferum
PSO017G2604 Papaver somniferum
PSO017G4655 Papaver somniferum
PSO017G4711 Papaver somniferum
PSO017G5272 Papaver somniferum
PSO017G5327 Papaver somniferum
PSO017G5491 Papaver somniferum
PSO017G5647 Papaver somniferum
PSO017G5853 Papaver somniferum
PSO017G6172 Papaver somniferum
PSO017G6673 Papaver somniferum
PSO017G6950 Papaver somniferum
PSO017G7002 Papaver somniferum
PSO017G7100 Papaver somniferum
PSO048G0001 Papaver somniferum
PSO063G2588 Papaver somniferum
PSO063G3188 Papaver somniferum
PSO063G4741 Papaver somniferum
PSO063G5780 Papaver somniferum
PSO063G5805 Papaver somniferum
PSO063G6380 Papaver somniferum
PSO068G0001 Papaver somniferum
PSO081G0126 Papaver somniferum
PSO170G0074 Papaver somniferum
PSO170G0827 Papaver somniferum
PSO170G1548 Papaver somniferum
PSO170G1574 Papaver somniferum
PSO170G1684 Papaver somniferum
PSO170G1814 Papaver somniferum
PSO170G1887 Papaver somniferum
PSO170G2940 Papaver somniferum
PSO170G3002 Papaver somniferum
PSO170G4114 Papaver somniferum
PSO170G5838 Papaver somniferum
PSO173G0025 Papaver somniferum
PSO173G0158 Papaver somniferum
PSO198G0040 Papaver somniferum
PSO198G0097 Papaver somniferum
PSO198G0140 Papaver somniferum
PSO198G0155 Papaver somniferum
PSO210G2757 Papaver somniferum
PSO210G5448 Papaver somniferum
PSO210G5793 Papaver somniferum
PSO264G0001 Papaver somniferum
PSO297G0001 Papaver somniferum
PSO332G0001 Papaver somniferum
PSO339G0812 Papaver somniferum
PSO339G1305 Papaver somniferum
PSO339G2825 Papaver somniferum
PSO339G3879 Papaver somniferum
PSO339G4603 Papaver somniferum
PSO384G2856 Papaver somniferum
PSO384G3823 Papaver somniferum
PSO384G4087 Papaver somniferum
PSO413G0001 Papaver somniferum
PSO421G0057 Papaver somniferum
PSO421G0252 Papaver somniferum
PSO421G0277 Papaver somniferum
PSO421G0346 Papaver somniferum
PSO421G0491 Papaver somniferum
PSO421G0643 Papaver somniferum
PSO423G0165 Papaver somniferum
PSO455G0070 Papaver somniferum
PSO455G0259 Papaver somniferum
PSO478G2329 Papaver somniferum
PSO541G3453 Papaver somniferum
PSO541G3522 Papaver somniferum
PSO541G6189 Papaver somniferum
PSO544G0001 Papaver somniferum
PSO673G0012 Papaver somniferum
PSO673G0018 Papaver somniferum
PSO673G0034 Papaver somniferum
PSO673G0035 Papaver somniferum
PSO675G0763 Papaver somniferum
PSO675G3184 Papaver somniferum
PSO675G5094 Papaver somniferum
PSO675G5498 Papaver somniferum
PSO675G6836 Papaver somniferum
PSO675G9194 Papaver somniferum
PSO724G0021 Papaver somniferum
PSO725G0001 Papaver somniferum
PSO781G0001 Papaver somniferum
PSO781G0074 Papaver somniferum
PSO781G0100 Papaver somniferum
PSO781G0106 Papaver somniferum
PSO781G0261 Papaver somniferum
PSO781G0262 Papaver somniferum
PSO781G0280 Papaver somniferum
PSO782G1699 Papaver somniferum
PSO782G4102 Papaver somniferum
PSO782G5322 Papaver somniferum
PSO801G0775 Papaver somniferum
PSO832G0592 Papaver somniferum
PSO832G2825 Papaver somniferum
PSO832G2976 Papaver somniferum
QL03p066506 Quercus lobata
RcHm_v2.0_Chr2g0114561 Rosa chinensis
RcHm_v2.0_Chr2g0114571 Rosa chinensis
RcHm_v2.0_Chr2g0114581 Rosa chinensis
RcHm_v2.0_Chr2g0114591 Rosa chinensis
RcHm_v2.0_Chr4g0406311 Rosa chinensis
RcHm_v2.0_Chr5g0051051 Rosa chinensis
Rhsim08G0143400 Rhododendron simsii
Rhsim08G0247200 Rhododendron simsii
RhsimUnG0234100 Rhododendron simsii
Sabra17G0002900 Salix brachista
Sabra17G0003000 Salix brachista
Sabra17G0003200 Salix brachista
Sabra17G0003600 Salix brachista
Sabra17G0003700 Salix brachista
Sabra17G0004300 Salix brachista
Sabra17G0004700 Salix brachista
Sabra17G0004800 Salix brachista
Sabra17G0013800 Salix brachista
Sabra17G0014000 Salix brachista
Sabra17G0014100 Salix brachista
SalBow4G2246 Salvia bowleyana
Sc13g0000860 Simmondsia chinensis
Sc13g0000870 Simmondsia chinensis
Sc13g0000880 Simmondsia chinensis
Sed0001302 Sechium edule
Sed0010811 Sechium edule
Sed0025157 Sechium edule
SEGI_31495 Sequoiadendron giganteum
SGA_v2.0_scaffold105G30315 Striga asiatica
SGA_v2.0_scaffold172G39053 Striga asiatica
SGA_v2.0_scaffold195G40872 Striga asiatica
SHI00656 Sapria himalayana
SHI00658 Sapria himalayana
SHI00659 Sapria himalayana
SHI00660 Sapria himalayana
SHI22050 Sapria himalayana
SMO358G0014 Selaginella moellendorffii
Solyc01g097260.4 Solanum lycopersicum
Solyc01g097640.3 Solanum lycopersicum
Sopen00g003550 Solanum pennellii
Sopen01g041250 Solanum pennellii
Sp1g05450 Schrenkiella parvula
Sp7g16520 Schrenkiella parvula
TAR627G1002 Trochodendron aralioides
THA.LOC104815521 Tarenaya hassleriana
Thecc.10G116300 Theobroma cacao
Thhalv10006612m.g Eutrema salsugineum
Thhalv10027216m.g Eutrema salsugineum
TPR.G34218 Trifolium pratense
TWI38G2091 Tripterygium wilfordii
unitig_748.g7989 Utricularia gibba
unitig_748.g7990 Utricularia gibba
vmacro16180 Vaccinium macrocarpon
VMungo0251G2548 Vigna mungo
VMungo0464G1994 Vigna mungo
VMungo0647G1719 Vigna mungo
VMungo1127G0405 Vigna mungo
Zm00001eb015920 Zea mays

User provided reference genes

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