Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p06810 Brassica napus
A03p06130 Brassica napus
A05p08490 Brassica napus
Aa31sc144G50 Aethionema arabicum
Aa31sc23G140 Aethionema arabicum
Actinidia02477 Actinidia chinensis
Actinidia07061 Actinidia chinensis
Actinidia13121 Actinidia chinensis
Actinidia13861 Actinidia chinensis
Actinidia20459 Actinidia chinensis
Actinidia20460 Actinidia chinensis
Actinidia29209 Actinidia chinensis
Actinidia37235 Actinidia chinensis
Ah.08g212190 Amaranthus hybridus
Ah.09g237720 Amaranthus hybridus
AL6G24270 Arabidopsis lyrata
AL8G36380 Arabidopsis lyrata
Aqoxy2G02019 Aquilegia oxysepala
Aqoxy4G00204 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.88FAZH Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.9M6L8G Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.H9BCMH Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HU28CX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ITVB4V Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VC1WKW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VTI2KS Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VXB2VZ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.X6TLQR Arachis hypogaea
AT5G13660 Arabidopsis thaliana
AT5G59830 Arabidopsis thaliana
ATR0559G347 Amborella trichopoda
Atru.chr12.518 Acer truncatum
Atru.chr3.3825 Acer truncatum
Atru.chr8.1925 Acer truncatum
AUR62014894 Chenopodium quinoa
AUR62031099 Chenopodium quinoa
BcaB01g05343 Brassica carinata
BcaB05g22590 Brassica carinata
BcaNung04194 Brassica carinata
BcaNung06883 Brassica carinata
BolC2t07308H Brassica oleracea
BolC3t13213H Brassica oleracea
BolC4t22649H Brassica oleracea
BraA02t05759Z Brassica rapa
BraA03t09945Z Brassica rapa
BraA05t19818Z Brassica rapa
C02p12100 Brassica napus
C03p07140 Brassica napus
C04p10580 Brassica napus
CAN.G807.3 Capsicum annuum
CANSAT54G2017 Cannabis sativa
CANSAT80G0821 Cannabis sativa
CARHR199780 Cardamine hirsuta
CARHR273410 Cardamine hirsuta
Carub.0006s1182 Capsella rubella
Carub.0008s2064 Capsella rubella
Ca_07218_v3 Cicer arietinum L.
Ca_19189_v3 Cicer arietinum L.
Cc01_g12360 Coffea canephora
Cc06_g03040 Coffea canephora
CDE04G1697 Ceratophyllum demersum
CDE07G0551 Ceratophyllum demersum
Ciclev10011464m.g Citrus clementina
Ciclev10028378m.g Citrus clementina
Ciclev10030855m.g Citrus clementina
CiPaw.01G282900 Carya illinoinensis
CiPaw.02G181500 Carya illinoinensis
CiPaw.09G188200 Carya illinoinensis
CiPaw.14G072100 Carya illinoinensis
ClCG02G020410 Citrullus lanatus
ClCG07G003180 Citrullus lanatus
COL.COLO4_14863 Corchorus olitorius
COL.COLO4_14950 Corchorus olitorius
COL.COLO4_18453 Corchorus olitorius
COL.COLO4_38503 Corchorus olitorius
Cpa.g.sc1.360 Carica papaya
Cpa.g.sc163.28 Carica papaya
Cpa.g.sc190.29 Carica papaya
CsaV3_5G006950 Cucumis sativus L.
CsaV3_6G022200 Cucumis sativus L.
CSS0013315 Camellia sinensis var. sinensis
CSS0014751 Camellia sinensis var. sinensis
CSS0015931 Camellia sinensis var. sinensis
CSS0016342 Camellia sinensis var. sinensis
CSS0021223 Camellia sinensis var. sinensis
CSS0027045 Camellia sinensis var. sinensis
CSS0036599 Camellia sinensis var. sinensis
CSS0046989 Camellia sinensis var. sinensis
DCAR_015604 Daucus carota
DCAR_020854 Daucus carota
Dinv25979 Davidia involucrata
Dinv31425 Davidia involucrata
Dinv32852 Davidia involucrata
Dinv35643 Davidia involucrata
Duzib114G0588 Durio zibethinus
Duzib128G0936 Durio zibethinus
Duzib128G1287 Durio zibethinus
Duzib128G1640 Durio zibethinus
Duzib168G0258 Durio zibethinus
Duzib170G0150 Durio zibethinus
ECA238G4435 Erigeron canadensis
EL10Ac8g20455 Beta vulgaris
Eucgr.G02911 Eucalyptus grandis
Eucgr.J02071 Eucalyptus grandis
Eucgr.K03169 Eucalyptus grandis
FAN01G0472 Fragaria x ananassa
FAN02G0258 Fragaria x ananassa
FAN05G2743 Fragaria x ananassa
FAN06G3333 Fragaria x ananassa
FAN09G4829 Fragaria x ananassa
FAN10G1749 Fragaria x ananassa
FAN11G0935 Fragaria x ananassa
FAN14G4434 Fragaria x ananassa
FAN16G3362 Fragaria x ananassa
FAN21G1186 Fragaria x ananassa
FAN25G0035 Fragaria x ananassa
FvH4_3g35080 Fragaria vesca
FvH4_6g14380 Fragaria vesca
FvH4_7g21830 Fragaria vesca
Glyma.02G094400 Glycine max
Glyma.10G045000 Glycine max
Glyma.11G142400 Glycine max
Glyma.12G065700 Glycine max
Glyma.13G132600 Glycine max
Glyma.18G287300 Glycine max
Gohir.A05G097800 Gossypium hirsutum
Gohir.A05G300700 Gossypium hirsutum
Gohir.A13G020200 Gossypium hirsutum
Gohir.A13G090300 Gossypium hirsutum
Gohir.D05G097900 Gossypium hirsutum
Gohir.D05G300400 Gossypium hirsutum
Gohir.D13G020800 Gossypium hirsutum
Gohir.D13G093000 Gossypium hirsutum
Gorai.009G101500 Gossypium raimondii
Gorai.009G318200 Gossypium raimondii
Gorai.010G140200 Gossypium raimondii
Gorai.013G023200 Gossypium raimondii
GSVIVG01016599001 Vitis vinifera
GSVIVG01025029001 Vitis vinifera
GSVIVG01025615001 Vitis vinifera
HanXRQChr01g0026621 Helianthus annuus
HanXRQChr08g0228201 Helianthus annuus
Haze_17025 Corylus avellana
Haze_20735 Corylus avellana
Haze_24039 Corylus avellana
Hma1.2p1_0035F.1_g022070 Hydrangea macrophylla
Hma1.2p1_0573F.1_g181390 Hydrangea macrophylla
Hma1.2p1_0624F.1_g191270 Hydrangea macrophylla
Hma1.2p1_1481F.1_g286110 Hydrangea macrophylla
Hma1.2p1_1707F.1_g298460 Hydrangea macrophylla
Hma1.2p1_1707F.1_g298540 Hydrangea macrophylla
Hund23830 Selenicereus undatus
Lalb_Chr02g0144071 Lupinus albus
Lalb_Chr02g0153151 Lupinus albus
Lalb_Chr04g0257891 Lupinus albus
Lalb_Chr04g0257901 Lupinus albus
Lalb_Chr10g0091821 Lupinus albus
Lalb_Chr19g0137691 Lupinus albus
Lalb_Chr21g0314321 Lupinus albus
Lj1C933T3 Lonicera japonica
Lj1g0012208 Lotus japonicus
Lj2A100G74 Lonicera japonica
Lj2A1056T36 Lonicera japonica
Lj3g0015218 Lotus japonicus
Lj5g0000735 Lotus japonicus
Lj8A88T25 Lonicera japonica
Lsat_1_v5_gn_1_55881 Lactuca sativa
Lsat_1_v5_gn_9_22121 Lactuca sativa
Manes.04G031200 Manihot esculenta
Manes.07G112000 Manihot esculenta
Manes.08G077300 Manihot esculenta
Manes.09G086500 Manihot esculenta
Manes.10G034700 Manihot esculenta
MD01G1123100 Malus domestica
MD03G1099200 Malus domestica
MD04G1120300 Malus domestica
MD07G1192800 Malus domestica
MD11G1113100 Malus domestica
MD12G1137600 Malus domestica
Medtr1g067750 Medicago truncatula
Medtr4g063150 Medicago truncatula
Medtr7g023750 Medicago truncatula
MELO3C013680.2 Cucumis melo
MELO3C023841.2 Cucumis melo
Migut.C00890 Erythranthe guttata
Migut.E01093 Erythranthe guttata
Migut.N02663 Erythranthe guttata
MSTRG.13842 Avicennia marina
MSTRG.17843 Avicennia marina
MSTRG.1867 Avicennia marina
Nitab4.5_0000426g0040 Nicotiana tabacum
Nitab4.5_0000766g0100 Nicotiana tabacum
Nitab4.5_0002655g0080 Nicotiana tabacum
Nitab4.5_0003212g0010 Nicotiana tabacum
Nitab4.5_0008142g0050 Nicotiana tabacum
Nitab4.5_0011862g0030 Nicotiana tabacum
Nn2g10464 Nelumbo nucifera
Nn2g12896 Nelumbo nucifera
Nn4g22015 Nelumbo nucifera
Nn4g25480 Nelumbo nucifera
Nn4g25485 Nelumbo nucifera
Nn4g25496 Nelumbo nucifera
Nn4g25505 Nelumbo nucifera
Nn4g25508 Nelumbo nucifera
Oeu009162.1 Olea europaea
Oeu009169.1 Olea europaea
Oeu051441.1 Olea europaea
Peaxi162Scf00039g01013 Petunia axillaris
Peaxi162Scf00060g00023 Petunia axillaris
Peaxi162Scf00679g00016 Petunia axillaris
PGR004G0607 Punica granatum
PGR044G2454 Punica granatum
PGR142G0844 Punica granatum
PGSC0003DMG400008933 Solanum tuberosum
PGSC0003DMG400045231 Solanum tuberosum
PGSC0003DMG400047103 Solanum tuberosum
PGSC0003DMG402030312 Solanum tuberosum
Phvul.007G158700 Phaseolus vulgaris
Phvul.008G014500 Phaseolus vulgaris
Potri.001G236000 Populus trichocarpa
Potri.006G082800 Populus trichocarpa
Potri.008G051300 Populus trichocarpa
Potri.009G027800 Populus trichocarpa
Potri.010G209300 Populus trichocarpa
Prupe.2G230700 Prunus persica
Prupe.6G083800 Prunus persica
Prupe.6G249500 Prunus persica
Psat3g184160 Pisum sativum
Psat6g066040 Pisum sativum
Psat7g217240 Pisum sativum
PSO210G3580 Papaver somniferum
PSO339G3569 Papaver somniferum
PSO339G6463 Papaver somniferum
PSO384G0081 Papaver somniferum
PSO384G1611 Papaver somniferum
PSO648G0062 Papaver somniferum
PSO765G0180 Papaver somniferum
QL01p033136 Quercus lobata
QL07p046827 Quercus lobata
QL07p046978 Quercus lobata
QL08p058772 Quercus lobata
RcHm_v2.0_Chr1g0366111 Rosa chinensis
RcHm_v2.0_Chr3g0467441 Rosa chinensis
RcHm_v2.0_Chr5g0063081 Rosa chinensis
RcHm_v2.0_Chr7g0232731 Rosa chinensis
Rhsim01G0224700 Rhododendron simsii
Rhsim03G0128600 Rhododendron simsii
Rhsim03G0140900 Rhododendron simsii
Rhsim09G0163700 Rhododendron simsii
Rhsim13G0086300 Rhododendron simsii
Sabra06G0062500 Salix brachista
Sabra10G0161700 Salix brachista
Sabra16G0142000 Salix brachista
SalBow1G0534 Salvia bowleyana
SalBow1G3066 Salvia bowleyana
SalBow1G7039 Salvia bowleyana
SalBow7G1120 Salvia bowleyana
Sc20g0002570 Simmondsia chinensis
Sc20g0004490 Simmondsia chinensis
Sed0014441 Sechium edule
Sed0020075 Sechium edule
Sed0023268 Sechium edule
SGA_v2.0_scaffold144G35943 Striga asiatica
SGA_v2.0_scaffold146G36143 Striga asiatica
SGA_v2.0_scaffold479G52244 Striga asiatica
SGA_v2.0_scaffold6G03143 Striga asiatica
SHI12615 Sapria himalayana
SMO367G0633 Selaginella moellendorffii
Solyc06g075790.3 Solanum lycopersicum
Solyc09g010350.4 Solanum lycopersicum
Sopen06g032220 Solanum pennellii
Sopen09g005080 Solanum pennellii
Sp4g19790 Schrenkiella parvula
Sp6g21510 Schrenkiella parvula
Sp6g30360 Schrenkiella parvula
TAR623G0233 Trochodendron aralioides
TAR633G0134 Trochodendron aralioides
TAR633G0336 Trochodendron aralioides
THA.LOC104799354 Tarenaya hassleriana
THA.LOC104810809 Tarenaya hassleriana
THA.LOC104827321 Tarenaya hassleriana
Thecc.05G045300 Theobroma cacao
Thecc.09G327300 Theobroma cacao
Thecc.10G048200 Theobroma cacao
Thhalv10013151m.g Eutrema salsugineum
Thhalv10013844m.g Eutrema salsugineum
Thhalv10016612m.g Eutrema salsugineum
TPR.G1016 Trifolium pratense
TPR.G15488 Trifolium pratense
TPR.G15508 Trifolium pratense
TPR.G9276 Trifolium pratense
TPR.G9279 Trifolium pratense
TWI31G1027 Tripterygium wilfordii
TWI74G1658 Tripterygium wilfordii
TWI75G1729 Tripterygium wilfordii
TWI77G0016 Tripterygium wilfordii
unitig_0.g1228 Utricularia gibba
unitig_52.g16841 Utricularia gibba
unitig_61.g26349 Utricularia gibba
vmacro03109 Vaccinium macrocarpon
vmacro08674 Vaccinium macrocarpon
vmacro14505 Vaccinium macrocarpon
vmacro14506 Vaccinium macrocarpon
VMungo0720G1790 Vigna mungo
VMungo1383G2878 Vigna mungo

User provided reference genes

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