Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p11840 Brassica napus
A06p34710 Brassica napus
A09p06760 Brassica napus
A09p24930 Brassica napus
Aa31LG11G3190 Aethionema arabicum
Aa31LG1G6710 Aethionema arabicum
Aa31LG2G6630 Aethionema arabicum
Aa31LG3G8790 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.1328 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.1519 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.893 Anthoceros agrestis
Actinidia02618 Actinidia chinensis
Actinidia08386 Actinidia chinensis
Actinidia13681 Actinidia chinensis
Actinidia25884 Actinidia chinensis
Actinidia34127 Actinidia chinensis
Actinidia37287 Actinidia chinensis
Actinidia38400 Actinidia chinensis
Ah.07g206980 Amaranthus hybridus
Ah.13g068890 Amaranthus hybridus
AL5G14220 Arabidopsis lyrata
AL6G35200 Arabidopsis lyrata
AL8G26830 Arabidopsis lyrata
Aqoxy3G03893 Aquilegia oxysepala
Aqoxy7G00328 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.60XZVP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.D2MQ0U Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JSJF91 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KSNA8H Arachis hypogaea
AT3G25680 Arabidopsis thaliana
AT5G23890 Arabidopsis thaliana
AT5G52410 Arabidopsis thaliana
ATR0053G012 Amborella trichopoda
ATR0680G150 Amborella trichopoda
Atru.chr1.429 Acer truncatum
Atru.chr11.1374 Acer truncatum
AUR62002931 Chenopodium quinoa
AUR62007741 Chenopodium quinoa
AUR62015960 Chenopodium quinoa
AUR62021166 Chenopodium quinoa
BcaB05g21954 Brassica carinata
BcaB07g30634 Brassica carinata
BcaC03g14534 Brassica carinata
BcaC04g21422 Brassica carinata
BcaC06g31125 Brassica carinata
BcaNung05471 Brassica carinata
BolC2t08110H Brassica oleracea
BolC7t43986H Brassica oleracea
BolC7t44907H Brassica oleracea
BolC9t53665H Brassica oleracea
BolC9t56050H Brassica oleracea
BraA02t06250Z Brassica rapa
BraA06t26398Z Brassica rapa
BraA09t36321Z Brassica rapa
BraA09t38081Z Brassica rapa
C02p19760 Brassica napus
C07p43780 Brassica napus
C09p07500 Brassica napus
C09p31960 Brassica napus
CAN.G1175.4 Capsicum annuum
CAN.G184.77 Capsicum annuum
CANSAT64G2925 Cannabis sativa
CARHR189670 Cardamine hirsuta
CARHR265350 Cardamine hirsuta
CARHR288540 Cardamine hirsuta
Carub.0005s0350 Capsella rubella
Carub.0006s2161 Capsella rubella
Carub.0008s1251 Capsella rubella
Ca_05686_v3 Cicer arietinum L.
Ca_14551_v3 Cicer arietinum L.
Ca_30409_v3 Cicer arietinum L.
CBR_g3307 Chara braunii
Cc02_g02780 Coffea canephora
Cc11_g10720 Coffea canephora
CDE09G0053 Ceratophyllum demersum
CDE09G0615 Ceratophyllum demersum
CDE10G0618 Ceratophyllum demersum
CDE10G1085 Ceratophyllum demersum
CDE11G0772 Ceratophyllum demersum
Cfa018644 Carpinus fangiana
Cfa023192 Carpinus fangiana
Ciclev10004249m.g Citrus clementina
Ciclev10031108m.g Citrus clementina
CiPaw.03G108200 Carya illinoinensis
CiPaw.15G002600 Carya illinoinensis
ClCG05G008140 Citrullus lanatus
ClCG05G023090 Citrullus lanatus
COL.COLO4_28054 Corchorus olitorius
Cpa.g.c29023.2 Carica papaya
Cpa.g.sc107.69 Carica papaya
CsaV3_3G017230 Cucumis sativus L.
CsaV3_5G033900 Cucumis sativus L.
CSS0012637 Camellia sinensis var. sinensis
DCAR_009374 Daucus carota
DCAR_016410 Daucus carota
DCAR_019283 Daucus carota
DCAR_020255 Daucus carota
DCAR_021655 Daucus carota
Dinv03054 Davidia involucrata
Dinv05805 Davidia involucrata
Dinv09585 Davidia involucrata
Dinv16516 Davidia involucrata
Dinv28420 Davidia involucrata
Dinv35222 Davidia involucrata
Duzib068G1376 Durio zibethinus
Duzib084G1073 Durio zibethinus
Duzib205G0396 Durio zibethinus
Duzib248G1574 Durio zibethinus
ECA232G3432 Erigeron canadensis
ECA233G2653 Erigeron canadensis
EL10Ac3g05610 Beta vulgaris
EL10Ac6g14517 Beta vulgaris
Eucgr.A02775 Eucalyptus grandis
Eucgr.G02358 Eucalyptus grandis
FAN01G1718 Fragaria x ananassa
FAN03G3237 Fragaria x ananassa
FAN03G3384 Fragaria x ananassa
FAN06G3811 Fragaria x ananassa
FAN06G4866 Fragaria x ananassa
FAN07G1361 Fragaria x ananassa
FAN10G2483 Fragaria x ananassa
FAN10G3902 Fragaria x ananassa
FAN12G2404 Fragaria x ananassa
FAN17G2361 Fragaria x ananassa
FvH4_4g28210 Fragaria vesca
FvH4_7g29760 Fragaria vesca
Glyma.01G089500 Glycine max
Glyma.02G101200 Glycine max
Glyma.09G136800 Glycine max
Glyma.10G234000 Glycine max
Glyma.16G182200 Glycine max
Glyma.20G160251 Glycine max
Glyma.20G160302 Glycine max
Glyma.20G160352 Glycine max
Gohir.A08G099000 Gossypium hirsutum
Gohir.A09G041500 Gossypium hirsutum
Gohir.A12G172000 Gossypium hirsutum
Gohir.D08G110500 Gossypium hirsutum
Gohir.D09G042400 Gossypium hirsutum
Gohir.D12G174400 Gossypium hirsutum
Gorai.004G118100 Gossypium raimondii
Gorai.004G118200 Gossypium raimondii
Gorai.006G048600 Gossypium raimondii
Gorai.008G187100 Gossypium raimondii
GSVIVG01011967001 Vitis vinifera
GSVIVG01028918001 Vitis vinifera
HanXRQChr02g0038231 Helianthus annuus
HanXRQChr04g0099221 Helianthus annuus
HanXRQChr12g0365331 Helianthus annuus
Haze_13667 Corylus avellana
Haze_13668 Corylus avellana
Haze_17425 Corylus avellana
Hma1.2p1_0042F.1_g025440 Hydrangea macrophylla
Hma1.2p1_0862F.1_g229850 Hydrangea macrophylla
Hma1.2p1_1604F.1_g293250 Hydrangea macrophylla
Hma1.2p1_1604F.1_g293300 Hydrangea macrophylla
HPP92_005035 Vanilla planifolia
HPP92_010105 Vanilla planifolia
HPP92_010259 Vanilla planifolia
HPP92_010261 Vanilla planifolia
HPP92_010264 Vanilla planifolia
HPP92_010266 Vanilla planifolia
HPP92_010273 Vanilla planifolia
Hund04765 Selenicereus undatus
Hund11737 Selenicereus undatus
Hund25106 Selenicereus undatus
Lalb_Chr03g0034681 Lupinus albus
Lalb_Chr04g0254971 Lupinus albus
Lalb_Chr17g0341861 Lupinus albus
Lj2g0021982 Lotus japonicus
Lj2g0025410 Lotus japonicus
Lj3C1021T1 Lonicera japonica
Lj8A23T61 Lonicera japonica
Lsat_1_v5_gn_8_37461 Lactuca sativa
Lsat_1_v5_gn_9_55340 Lactuca sativa
Manes.06G073300 Manihot esculenta
Manes.06G149200 Manihot esculenta
Manes.14G096500 Manihot esculenta
Mapoly0025s0069 Marchantia polymorpha
Mapoly0046s0118 Marchantia polymorpha
MBI16_g23770_MAGBIO Magnolia biondii
MBI16_g23771_MAGBIO Magnolia biondii
MBI16_g33830_MAGBIO Magnolia biondii
MBI16_g39332_MAGBIO Magnolia biondii
MBI16_g46926_MAGBIO Magnolia biondii
MBI17_g33588_MAGBIO Magnolia biondii
MBI17_g45206_MAGBIO Magnolia biondii
MD01G1204600 Malus domestica
MD07G1273100 Malus domestica
MD11G1305600 Malus domestica
MD13G1047900 Malus domestica
MD13G1048000 Malus domestica
MD13G1260100 Malus domestica
MD16G1049600 Malus domestica
Medtr5g053260 Medicago truncatula
Medtr6g053740 Medicago truncatula
MELO3C012208.2 Cucumis melo
MELO3C031643.2 Cucumis melo
Migut.E00290 Erythranthe guttata
Migut.F01109 Erythranthe guttata
MSTRG.13500 Avicennia marina
MSTRG.84 Avicennia marina
Nitab4.5_0000084g0040 Nicotiana tabacum
Nitab4.5_0004439g0130 Nicotiana tabacum
Nitab4.5_0004705g0030 Nicotiana tabacum
Nitab4.5_0005803g0050 Nicotiana tabacum
Nn4g23699 Nelumbo nucifera
Nn6g33438 Nelumbo nucifera
Oeu024102.2 Olea europaea
Oeu044619.4 Olea europaea
Oeu045394.1 Olea europaea
Oeu056271.1 Olea europaea
Os03g0862100 Oryza sativa ssp. japonica
Os06g0499000 Oryza sativa ssp. japonica
Peaxi162Scf00367g00735 Petunia axillaris
Peaxi162Scf00444g00531 Petunia axillaris
PGR042G1981 Punica granatum
PGR119G1960 Punica granatum
PGSC0003DMG400000804 Solanum tuberosum
PGSC0003DMG400015786 Solanum tuberosum
PGSC0003DMG401029918 Solanum tuberosum
PGSC0003DMG402029918 Solanum tuberosum
Phvul.003G026000 Phaseolus vulgaris
Phvul.004G113900 Phaseolus vulgaris
Phvul.007G072000 Phaseolus vulgaris
Potri.010G131000 Populus trichocarpa
Potri.012G142500 Populus trichocarpa
Potri.015G145700 Populus trichocarpa
Pp3c15_13390 Physcomitrium patens
Pp3c17_15680 Physcomitrium patens
Pp3c23_21530 Physcomitrium patens
Pp3c8_24320 Physcomitrium patens
Pp3c9_18540 Physcomitrium patens
Prupe.1G304100 Prunus persica
Prupe.2G296700 Prunus persica
Psat1g104560 Pisum sativum
Psat1g121440 Pisum sativum
Psat2g090640 Pisum sativum
PSO063G3066 Papaver somniferum
PSO478G5157 Papaver somniferum
PSO782G2384 Papaver somniferum
PSO782G3058 Papaver somniferum
QL01p001010 Quercus lobata
QL09p013774 Quercus lobata
RcHm_v2.0_Chr1g0377741 Rosa chinensis
RcHm_v2.0_Chr4g0435981 Rosa chinensis
Rhsim03G0187400 Rhododendron simsii
Rhsim12G0080800 Rhododendron simsii
Sabra10G0099800 Salix brachista
Sabra12G0107200 Salix brachista
Sabra15G0155000 Salix brachista
Sabra15G0155100 Salix brachista
Sabra19G0074400 Salix brachista
SalBow8G3742 Salvia bowleyana
Sc04g0006800 Simmondsia chinensis
Sc04g0006810 Simmondsia chinensis
Sc13g0008830 Simmondsia chinensis
Sed0001026 Sechium edule
SEGI_02563 Sequoiadendron giganteum
SEGI_06512 Sequoiadendron giganteum
SEGI_16530 Sequoiadendron giganteum
SEGI_37768 Sequoiadendron giganteum
SGA_v2.0_scaffold10G05327 Striga asiatica
SGA_v2.0_scaffold113G31723 Striga asiatica
SGA_v2.0_scaffold14G06814 Striga asiatica
SMO367G0169 Selaginella moellendorffii
Solyc03g025530.3 Solanum lycopersicum
Solyc05g009940.4 Solanum lycopersicum
Solyc06g036020.1 Solanum lycopersicum
Solyc06g036030.2 Solanum lycopersicum
Solyc06g036040.1 Solanum lycopersicum
Sopen03g004370 Solanum pennellii
Sopen05g005750 Solanum pennellii
Sp2g14940 Schrenkiella parvula
Sp2g23390 Schrenkiella parvula
Sp6g14630 Schrenkiella parvula
TAR374G1182 Trochodendron aralioides
TAR375G1076 Trochodendron aralioides
TAR375G1094 Trochodendron aralioides
TAR629G2041 Trochodendron aralioides
THA.LOC104811972 Tarenaya hassleriana
THA.LOC104821392 Tarenaya hassleriana
THA.LOC104825717 Tarenaya hassleriana
Thecc.02G362600 Theobroma cacao
Thecc.03G179200 Theobroma cacao
Thhalv10003612m.g Eutrema salsugineum
Thhalv10003928m.g Eutrema salsugineum
Thhalv10012763m.g Eutrema salsugineum
TPR.G20820 Trifolium pratense
TPR.G2697 Trifolium pratense
TPR.G8168 Trifolium pratense
TWI14G1293 Tripterygium wilfordii
TWI39G0993 Tripterygium wilfordii
TWI75G0366 Tripterygium wilfordii
TWI79G0162 Tripterygium wilfordii
unitig_26.g10198 Utricularia gibba
vmacro01361 Vaccinium macrocarpon
vmacro06662 Vaccinium macrocarpon
VMungo0720G1553 Vigna mungo
VMungo1215G1906 Vigna mungo
Zm00001eb065340 Zea mays
Zm00001eb133680 Zea mays
Zm00001eb281400 Zea mays
Zm00001eb312880 Zea mays
Zm00001eb382040 Zea mays

User provided reference genes

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