Gene: AT3G25680

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G25680
  • Transcript Identifier AT3G25680.1
  • Gene Type Coding gene
  • Location Chr3 : 9349693-9352258 : positive

Gene Family Information

  • ID HOM05D002201
  • #Genes/#Species 305/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G25680.1
  • uniprot F4JA39

Descriptions

  • Description SLH domain protein
  • Computational description FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: S-layer homology domain (InterPro:IPR001119); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G23890.1); Has 2454 Blast hits to 2065 proteins in 355 species: Archae - 39; Bacteria - 284; Metazoa - 1081; Fungi - 166; Plants - 264; Viruses - 45; Other Eukaryotes - 575 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008150
ND
Gene Ontologybiological_process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003674
ND
Gene Ontologymolecular_function

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
IDA
GOA Databasechloroplast
GO:0009507
HDA
ISM
Gene Ontologychloroplast1
GO:0009941
IDA
GOA Databasechloroplast envelope
GO:0009941
HDA
Gene Ontologychloroplast envelope2
GO:0009536
IDA
GOA Databaseplastid
GO:0009536
HDA
Gene Ontologyplastid3
GO:0005829
HDA
Gene Ontologycytosol4
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0016020
IEA
GOA Databasemembrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001119 S-layer homology domain
Mapman id Description
35.1 not assigned.annotated