Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p05390 Brassica napus
A09p65940 Brassica napus
Aa31sc375G10 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.4851 Anthoceros agrestis
Actinidia03909 Actinidia chinensis
Actinidia04013 Actinidia chinensis
Actinidia05399 Actinidia chinensis
Actinidia35472 Actinidia chinensis
Actinidia37073 Actinidia chinensis
Actinidia37074 Actinidia chinensis
Ah.08g210370 Amaranthus hybridus
Ah.08g223430 Amaranthus hybridus
AL1G18780 Arabidopsis lyrata
Aqoxy2G01053 Aquilegia oxysepala
Aqoxy4G02720 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.2B4UDD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.3U3N3Y Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.67ZR0E Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.7360MD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.9QXT2S Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.C869MB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.E901NL Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.EJ6VAJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HS84F1 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.II55D9 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.K9T6CE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KWC9QS Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RG5GS0 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.S6V9G6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UI7WMA Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UN3USV Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WNL2KP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZN1FNT Arachis hypogaea
AT1G08370 Arabidopsis thaliana
ATR0081G046 Amborella trichopoda
Atru.chr3.3171 Acer truncatum
Atru.chr3.3172 Acer truncatum
Atru.chr8.1440 Acer truncatum
AUR62001525 Chenopodium quinoa
AUR62006241 Chenopodium quinoa
AUR62020258 Chenopodium quinoa
AUR62028476 Chenopodium quinoa
BcaB01g00485 Brassica carinata
BcaB03g13341 Brassica carinata
BcaB07g34084 Brassica carinata
BcaB07g34085 Brassica carinata
BcaC01g01008 Brassica carinata
BcaC07g38424 Brassica carinata
BcaC07g38427 Brassica carinata
BcaC07g38435 Brassica carinata
BcaC07g41947 Brassica carinata
BcaC07g42531 Brassica carinata
BolC1t04884H Brassica oleracea
BolC3t21023H Brassica oleracea
BolC8t47164H Brassica oleracea
BolC8t50312H Brassica oleracea
BraA06t23748Z Brassica rapa
BraA08t35433Z Brassica rapa
BraA09t41938Z Brassica rapa
C05p06510 Brassica napus
C08p03610 Brassica napus
C08p11860 Brassica napus
C08p11900 Brassica napus
C08p11950 Brassica napus
C08p12020 Brassica napus
C08p50040 Brassica napus
CAN.G226.2 Capsicum annuum
CAN.G397.93 Capsicum annuum
CAN.G919.40 Capsicum annuum
CANSAT64G0756 Cannabis sativa
CARHR008250 Cardamine hirsuta
Carub.0001s0772 Capsella rubella
Ca_01647_v3 Cicer arietinum L.
Ca_09026_v3 Cicer arietinum L.
CBR_g19774 Chara braunii
CBR_g63121 Chara braunii
Cc01_g08840 Coffea canephora
Cc06_g06200 Coffea canephora
CDE03G0388 Ceratophyllum demersum
CDE06G0357 Ceratophyllum demersum
CDE08G0722 Ceratophyllum demersum
Cfa009989 Carpinus fangiana
Cfa016649 Carpinus fangiana
Ciclev10012009m.g Citrus clementina
Ciclev10028751m.g Citrus clementina
Ciclev10030291m.g Citrus clementina
Ciclev10030380m.g Citrus clementina
CiPaw.09G017500 Carya illinoinensis
CiPaw.10G012600 Carya illinoinensis
CiPaw.13G133100 Carya illinoinensis
ClCG04G010230 Citrullus lanatus
COL.COLO4_29668 Corchorus olitorius
COL.COLO4_34008 Corchorus olitorius
Cpa.g.sc104.90 Carica papaya
Cpa.g.sc195.21 Carica papaya
Cre07.g339250 Chlamydomonas reinhardtii
CsaV3_6G040870 Cucumis sativus L.
CSS0003714 Camellia sinensis var. sinensis
CSS0010666 Camellia sinensis var. sinensis
CSS0012979 Camellia sinensis var. sinensis
CSS0017670 Camellia sinensis var. sinensis
DCAR_007763 Daucus carota
DCAR_013415 Daucus carota
DCAR_020735 Daucus carota
Dinv08936 Davidia involucrata
Dinv21164 Davidia involucrata
Dinv22820 Davidia involucrata
Dinv31723 Davidia involucrata
Duzib093G0468 Durio zibethinus
Duzib106G1427 Durio zibethinus
Duzib168G1661 Durio zibethinus
Duzib170G0847 Durio zibethinus
ECA233G1534 Erigeron canadensis
ECA238G2695 Erigeron canadensis
EL10Ac3g05827 Beta vulgaris
EL10Ac7g16330 Beta vulgaris
EL10Ac7g16849 Beta vulgaris
Eucgr.A02630 Eucalyptus grandis
Eucgr.B03826 Eucalyptus grandis
FAN02G3259 Fragaria x ananassa
FAN03G1237 Fragaria x ananassa
FAN05G1536 Fragaria x ananassa
FAN05G1650 Fragaria x ananassa
FAN06G3858 Fragaria x ananassa
FAN06G4085 Fragaria x ananassa
FAN09G2188 Fragaria x ananassa
FAN11G0936 Fragaria x ananassa
FAN14G1652 Fragaria x ananassa
FAN16G1226 Fragaria x ananassa
FAN21G1767 Fragaria x ananassa
FvH4_3g25640 Fragaria vesca
FvH4_6g19510 Fragaria vesca
FvH4_7g09190 Fragaria vesca
FvH4_7g09200 Fragaria vesca
Glyma.03G198400 Glycine max
Glyma.12G186600 Glycine max
Glyma.13G314900 Glycine max
Glyma.19G196300 Glycine max
Gohir.A08G006700 Gossypium hirsutum
Gohir.A09G141400 Gossypium hirsutum
Gohir.A11G318500 Gossypium hirsutum
Gohir.D07G154800 Gossypium hirsutum
Gohir.D08G016900 Gossypium hirsutum
Gohir.D09G133300 Gossypium hirsutum
Gohir.D11G337700 Gossypium hirsutum
Gohir.D12G094266 Gossypium hirsutum
Gorai.001G176900 Gossypium raimondii
Gorai.004G011200 Gossypium raimondii
Gorai.006G152800 Gossypium raimondii
Gorai.007G367700 Gossypium raimondii
Gorai.009G399300 Gossypium raimondii
GSVIVG01033895001 Vitis vinifera
GSVIVG01036083001 Vitis vinifera
HanXRQChr01g0022951 Helianthus annuus
HanXRQChr02g0057391 Helianthus annuus
HanXRQChr04g0116351 Helianthus annuus
HanXRQChr04g0123231 Helianthus annuus
HanXRQChr09g0238361 Helianthus annuus
HanXRQChr10g0301581 Helianthus annuus
Haze_19655 Corylus avellana
Haze_23349 Corylus avellana
Hma1.2p1_0587F.1_g183980 Hydrangea macrophylla
Hma1.2p1_0820F.1_g224070 Hydrangea macrophylla
HPP92_005469 Vanilla planifolia
HPP92_023019 Vanilla planifolia
HPP92_023059 Vanilla planifolia
Hund03906 Selenicereus undatus
Hund18775 Selenicereus undatus
Lalb_Chr20g0111571 Lupinus albus
Lalb_Chr24g0393501 Lupinus albus
Lj1A257G22 Lonicera japonica
Lj1g0004636 Lotus japonicus
Lj2A143T31 Lonicera japonica
Lj2A968G33 Lonicera japonica
Lj2C143T8 Lonicera japonica
Lj3g0016489 Lotus japonicus
Lsat_1_v5_gn_1_59961 Lactuca sativa
Lsat_1_v5_gn_3_92080 Lactuca sativa
Lsat_1_v5_gn_6_37161 Lactuca sativa
Manes.08G028800 Manihot esculenta
Manes.09G051800 Manihot esculenta
Manes.11G164100 Manihot esculenta
Mapoly0002s0305 Marchantia polymorpha
MBI17_g01491_MAGBIO Magnolia biondii
MCO02G206 Micromonas commoda
MD03G1149600 Malus domestica
MD11G1168500 Malus domestica
MD12G1031300 Malus domestica
MD14G1031700 Malus domestica
Medtr2g086970 Medicago truncatula
Medtr7g105250 Medicago truncatula
MELO3C024565.2 Cucumis melo
Migut.D02429 Erythranthe guttata
Migut.N02475 Erythranthe guttata
MSTRG.17699 Avicennia marina
MSTRG.18769 Avicennia marina
MSTRG.21028 Avicennia marina
Nitab4.5_0000227g0350 Nicotiana tabacum
Nitab4.5_0000573g0090 Nicotiana tabacum
Nitab4.5_0000937g0100 Nicotiana tabacum
Nitab4.5_0003068g0010 Nicotiana tabacum
Nitab4.5_0005472g0070 Nicotiana tabacum
Nn7g38235 Nelumbo nucifera
Nn8g41248 Nelumbo nucifera
Oeu007201.1 Olea europaea
Oeu027724.1 Olea europaea
Oeu033360.3 Olea europaea
Oeu035574.3 Olea europaea
Oeu047835.2 Olea europaea
Oeu052269.1 Olea europaea
Oeu057395.1 Olea europaea
Os03g0837000 Oryza sativa ssp. japonica
Os07g0249600 Oryza sativa ssp. japonica
Os11g0155000 Oryza sativa ssp. japonica
Os12g0156400 Oryza sativa ssp. japonica
Peaxi162Scf00091g00717 Petunia axillaris
Peaxi162Scf00345g01029 Petunia axillaris
PGR004G1309 Punica granatum
PGR102G2768 Punica granatum
PGSC0003DMG400005889 Solanum tuberosum
PGSC0003DMG400008857 Solanum tuberosum
PGSC0003DMG400014735 Solanum tuberosum
Phvul.001G192600 Phaseolus vulgaris
Phvul.005G122100 Phaseolus vulgaris
Potri.006G208600 Populus trichocarpa
Potri.009G160200 Populus trichocarpa
Potri.016G075200 Populus trichocarpa
Pp3c16_16350 Physcomitrium patens
Pp3c27_1630 Physcomitrium patens
Pp3c5_13560 Physcomitrium patens
Pp3c6_17640 Physcomitrium patens
PRCOL_00002540 Prasinoderma coloniale
Prupe.6G135600 Prunus persica
Prupe.7G101100 Prunus persica
Psat0s2532g0040 Pisum sativum
Psat3g157240 Pisum sativum
Psat5g257840 Pisum sativum
Psat6g101080 Pisum sativum
PSO063G0904 Papaver somniferum
PSO339G5971 Papaver somniferum
PSO339G6366 Papaver somniferum
PSO384G3187 Papaver somniferum
PSO782G1096 Papaver somniferum
PSO801G0363 Papaver somniferum
QL01p011868 Quercus lobata
QL01p011873 Quercus lobata
QL07p038117 Quercus lobata
RcHm_v2.0_Chr3g0474851 Rosa chinensis
RcHm_v2.0_Chr5g0045761 Rosa chinensis
RcHm_v2.0_Chr5g0045791 Rosa chinensis
RcHm_v2.0_Chr7g0234071 Rosa chinensis
Rhsim01G0203900 Rhododendron simsii
Rhsim03G0069800 Rhododendron simsii
Sabra06G0160500 Salix brachista
Sabra09G0125400 Salix brachista
Sabra16G0077700 Salix brachista
Sabra16G0080600 Salix brachista
SalBow3G1847 Salvia bowleyana
Sc20g0006450 Simmondsia chinensis
Sc21g0006960 Simmondsia chinensis
Sc21g0006970 Simmondsia chinensis
Sed0001825 Sechium edule
Sed0006521 Sechium edule
SEGI_02190 Sequoiadendron giganteum
SEGI_05615 Sequoiadendron giganteum
SEGI_28252 Sequoiadendron giganteum
SGA_v2.0_scaffold100G29605 Striga asiatica
SGA_v2.0_scaffold22G09836 Striga asiatica
SGA_v2.0_scaffold22G09839 Striga asiatica
SMO174G0175 Selaginella moellendorffii
Solyc01g009390.4 Solanum lycopersicum
Solyc06g074210.3 Solanum lycopersicum
Solyc09g010300.3 Solanum lycopersicum
Sopen01g004900 Solanum pennellii
Sopen06g030630 Solanum pennellii
Sopen09g005000 Solanum pennellii
Sp1g07010 Schrenkiella parvula
TAR369G0493 Trochodendron aralioides
TAR623G0386 Trochodendron aralioides
THA.LOC104800517 Tarenaya hassleriana
THA.LOC104820727 Tarenaya hassleriana
THA.LOC104823498 Tarenaya hassleriana
Thecc.05G095800 Theobroma cacao
Thecc.09G279100 Theobroma cacao
Thhalv10007986m.g Eutrema salsugineum
TPR.G10787 Trifolium pratense
TPR.G23343 Trifolium pratense
TPR.G36067 Trifolium pratense
TPR.G36316 Trifolium pratense
TWI31G0363 Tripterygium wilfordii
TWI74G1108 Tripterygium wilfordii
TWI75G0010 Tripterygium wilfordii
TWI77G0830 Tripterygium wilfordii
TWI79G1089 Tripterygium wilfordii
unitig_27.g25033 Utricularia gibba
unitig_699.g19177 Utricularia gibba
vmacro07434 Vaccinium macrocarpon
vmacro14341 Vaccinium macrocarpon
VMungo0464G1888 Vigna mungo
VMungo0647G0229 Vigna mungo
VMungo1080G0599 Vigna mungo
VMungo1383G1807 Vigna mungo
Zm00001eb092570 Zea mays
Zm00001eb097080 Zea mays
Zm00001eb197150 Zea mays
Zm00001eb304550 Zea mays
Zm00001eb406930 Zea mays

User provided reference genes

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