Gene: Pp3c27_1630
General Information
Structural Information
- Species Physcomitrium patens
- Gene Identifier Pp3c27_1630
- Transcript Identifier Pp3c27_1630V3.1
- Gene Type Coding gene
- Location Chr27 : 922056-925809 : positive
Gene Family Information
- ID HOM05D002184
- #Genes/#Species 307/99
- Phylogenetic origin
- ID ORTHO05D002379
- #Genes/#Species 293/98
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- name Pp3c27_1630V3.1
- pacid 32952167
- alias Phypa_182007
- alias Phpat.027G004800
- alias Pp1s54_95V6
- uniprot A0A2K1IA77
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000290 | IBA IEA | GOA Database | deadenylation-dependent decapping of nuclear-transcribed mRNA | |
| GO:0000290 | IEA | InterPro | deadenylation-dependent decapping of nuclear-transcribed mRNA | |
| GO:0043085 | IEA | GOA Database | positive regulation of catalytic activity | |
| GO:0043085 | IEA | InterPro | positive regulation of catalytic activity | |
| GO:0031087 | IBA | GOA Database | deadenylation-independent decapping of nuclear-transcribed mRNA | |
| GO:0006952 | ISO | PLAZA Integrative Orthology | defense response | AT1G08370 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0008047 | IEA | GOA Database | enzyme activator activity | |
| GO:0008047 | IEA | InterPro | enzyme activator activity | |
| GO:0003729 | IBA | GOA Database | mRNA binding | |
| GO:0042803 | ISO | PLAZA Integrative Orthology | protein homodimerization activity | AT1G08370 |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT1G08370 |
| GO:0050072 | ISO | PLAZA Integrative Orthology | m7G(5')pppN diphosphatase activity | AT1G08370 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000932 | IBA | GOA Database | P-body | |
| GO:0005737 | ISO | PLAZA Integrative Orthology | cytoplasm | AT1G08370 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 16.4.2.2.1 | RNA processing.RNA surveillance.mRNA deadenylation-dependent decay.mRNA decapping complex.regulatory component DCP1 |