Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p18050 Brassica napus
A04p24720 Brassica napus
A05p13440 Brassica napus
A08p31460 Brassica napus
A09p23440 Brassica napus
A09p61090 Brassica napus
Aa31LG4G1060 Aethionema arabicum
Aa31LG5G4960 Aethionema arabicum
Aa31LG7G510 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.1050 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.886 Anthoceros agrestis
Actinidia18242 Actinidia chinensis
Actinidia25460 Actinidia chinensis
Actinidia36883 Actinidia chinensis
Ah.12g054860 Amaranthus hybridus
AL1G28090 Arabidopsis lyrata
AL2G10560 Arabidopsis lyrata
AL2G40590 Arabidopsis lyrata
AL4G27440 Arabidopsis lyrata
Aqoxy7G02325 Aquilegia oxysepala
Aqoxy7G03452 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0TKH4B Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.7N04NM Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.8RMH9G Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.I13WAY Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JS1FPB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LC0DCE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.T43LTL Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YR2NFS Arachis hypogaea
AT1G15930 Arabidopsis thaliana
AT2G32060 Arabidopsis thaliana
ATR0165G022 Amborella trichopoda
ATR1096G008 Amborella trichopoda
Atru.chr7.60 Acer truncatum
AUR62002690 Chenopodium quinoa
AUR62002691 Chenopodium quinoa
AUR62030147 Chenopodium quinoa
AUR62030151 Chenopodium quinoa
BcaB01g03997 Brassica carinata
BcaB02g06640 Brassica carinata
BcaB02g06644 Brassica carinata
BcaB02g06647 Brassica carinata
BcaB02g10443 Brassica carinata
BcaB03g13052 Brassica carinata
BcaB06g28582 Brassica carinata
BcaC01g00179 Brassica carinata
BcaC01g05918 Brassica carinata
BcaC02g07947 Brassica carinata
BcaC05g25612 Brassica carinata
BcaC07g38798 Brassica carinata
BcaC07g41464 Brassica carinata
BcaC08g46060 Brassica carinata
BcaC09g51033 Brassica carinata
BolC2t09117H Brassica oleracea
BolC3t14491H Brassica oleracea
BolC3t19912H Brassica oleracea
BolC4t27649H Brassica oleracea
BolC8t49360H Brassica oleracea
BolC8t52015H Brassica oleracea
BraA03t11065Z Brassica rapa
BraA04t17991Z Brassica rapa
BraA06t24366Z Brassica rapa
BraA08t35068Z Brassica rapa
BraA09t37944Z Brassica rapa
BraA09t41483Z Brassica rapa
C02p30640 Brassica napus
C03p21090 Brassica napus
C04p61660 Brassica napus
C08p17340 Brassica napus
C08p44690 Brassica napus
CAN.G1060.3 Capsicum annuum
CAN.G47.10 Capsicum annuum
CAN.G798.42 Capsicum annuum
CANSAT56G3613 Cannabis sativa
CANSAT78G2204 Cannabis sativa
CARHR016440 Cardamine hirsuta
CARHR073680 Cardamine hirsuta
CARHR125860 Cardamine hirsuta
Carub.0001s1573 Capsella rubella
Carub.0004s1341 Capsella rubella
Ca_17634_v3 Cicer arietinum L.
Ca_20533_v3 Cicer arietinum L.
Ca_20549_v3 Cicer arietinum L.
Ca_24590_v3 Cicer arietinum L.
CBR_g39666 Chara braunii
Cc02_g22910 Coffea canephora
Cc04_g05020 Coffea canephora
Cfa017978 Carpinus fangiana
Ciclev10026727m.g Citrus clementina
CiPaw.01G254000 Carya illinoinensis
CiPaw.02G161600 Carya illinoinensis
CiPaw.14G088800 Carya illinoinensis
CiPaw.16G114700 Carya illinoinensis
ClCG09G003280 Citrullus lanatus
ClCG11G003740 Citrullus lanatus
COL.COLO4_18780 Corchorus olitorius
Cpa.g.sc462.2 Carica papaya
Cpa.g.sc462.3 Carica papaya
Cre04.g214503 Chlamydomonas reinhardtii
CsaV3_2G015470 Cucumis sativus L.
CsaV3_7G031930 Cucumis sativus L.
CSS0000337 Camellia sinensis var. sinensis
CSS0019557 Camellia sinensis var. sinensis
CSS0026119 Camellia sinensis var. sinensis
DCAR_016298 Daucus carota
DCAR_019380 Daucus carota
DCAR_020879 Daucus carota
Dinv21404 Davidia involucrata
Dinv23292 Davidia involucrata
Dinv41394 Davidia involucrata
Dinv42878 Davidia involucrata
Dinv43222 Davidia involucrata
Duzib150G1081 Durio zibethinus
Duzib168G0109 Durio zibethinus
Duzib187G0756 Durio zibethinus
ECA246G3839 Erigeron canadensis
ECA247G1004 Erigeron canadensis
EL10Ac9g22215 Beta vulgaris
Eucgr.A00781 Eucalyptus grandis
Eucgr.C00361 Eucalyptus grandis
FAN02G3922 Fragaria x ananassa
FAN09G1059 Fragaria x ananassa
FAN14G1233 Fragaria x ananassa
FAN19G2676 Fragaria x ananassa
FAN28G0339 Fragaria x ananassa
FvH4_1g01120 Fragaria vesca
FvH4_1g01140 Fragaria vesca
FvH4_6g28730 Fragaria vesca
Glyma.07G023900 Glycine max
Glyma.08G217700 Glycine max
Glyma.13G369700 Glycine max
Glyma.15G003700 Glycine max
Glyma.20G033000 Glycine max
Gohir.A05G051700 Gossypium hirsutum
Gohir.A06G096600 Gossypium hirsutum
Gohir.A08G251600 Gossypium hirsutum
Gohir.A13G184600 Gossypium hirsutum
Gohir.D05G053200 Gossypium hirsutum
Gohir.D06G097100 Gossypium hirsutum
Gohir.D08G273200 Gossypium hirsutum
Gohir.D09G249101 Gossypium hirsutum
Gohir.D13G191000 Gossypium hirsutum
Gorai.004G291600 Gossypium raimondii
Gorai.009G055000 Gossypium raimondii
Gorai.010G112000 Gossypium raimondii
Gorai.013G216900 Gossypium raimondii
GSVIVG01023591001 Vitis vinifera
GSVIVG01034219001 Vitis vinifera
HanXRQChr04g0098471 Helianthus annuus
HanXRQChr05g0153791 Helianthus annuus
HanXRQChr08g0235841 Helianthus annuus
HanXRQChr09g0274481 Helianthus annuus
Haze_16658 Corylus avellana
Haze_19230 Corylus avellana
Haze_27694 Corylus avellana
Hma1.2p1_0222F.1_g093330 Hydrangea macrophylla
Hma1.2p1_0222F.1_g093340 Hydrangea macrophylla
Hma1.2p1_0260F.1_g104420 Hydrangea macrophylla
Hma1.2p1_2658F.1_g326365 Hydrangea macrophylla
Hma1.2p1_2707F.1_g327200 Hydrangea macrophylla
HPP92_020239 Vanilla planifolia
HPP92_027837 Vanilla planifolia
Hund00439 Selenicereus undatus
Hund06524 Selenicereus undatus
Lalb_Chr01g0012091 Lupinus albus
Lalb_Chr04g0264411 Lupinus albus
Lalb_Chr12g0197361 Lupinus albus
Lalb_Chr25g0278921 Lupinus albus
Lj3g0001396 Lotus japonicus
Lj3g0009201 Lotus japonicus
Lj3g0011667 Lotus japonicus
Lj3g0016058 Lotus japonicus
Lj4P831T20 Lonicera japonica
Lj5C79T7 Lonicera japonica
Lj9P494T42 Lonicera japonica
Lsat_1_v5_gn_1_32120 Lactuca sativa
Lsat_1_v5_gn_4_87060 Lactuca sativa
Lsat_1_v5_gn_5_8180 Lactuca sativa
Manes.04G103600 Manihot esculenta
Manes.11G065300 Manihot esculenta
Manes.15G144400 Manihot esculenta
Manes.17G095500 Manihot esculenta
Mapoly0003s0161 Marchantia polymorpha
MBI16_g22642_MAGBIO Magnolia biondii
MBI16_g23889_MAGBIO Magnolia biondii
MCO07G279 Micromonas commoda
MD02G1009400 Malus domestica
MD02G1009500 Malus domestica
MD15G1154900 Malus domestica
MD15G1155000 Malus domestica
Medtr4g006830 Medicago truncatula
Medtr5g012890 Medicago truncatula
Medtr8g093770 Medicago truncatula
MELO3C020759.2 Cucumis melo
MELO3C023463.2 Cucumis melo
Migut.D01113 Erythranthe guttata
Migut.I00702 Erythranthe guttata
MSTRG.22793 Avicennia marina
MSTRG.4685 Avicennia marina
Nitab4.5_0000548g0170 Nicotiana tabacum
Nitab4.5_0000948g0170 Nicotiana tabacum
Nitab4.5_0001271g0070 Nicotiana tabacum
Nitab4.5_0001340g0070 Nicotiana tabacum
Nitab4.5_0002591g0080 Nicotiana tabacum
Nitab4.5_0002591g0090 Nicotiana tabacum
Nitab4.5_0007913g0030 Nicotiana tabacum
Nitab4.5_0009812g0040 Nicotiana tabacum
Nn2g12321 Nelumbo nucifera
Nn2g15470 Nelumbo nucifera
Nn8g39826 Nelumbo nucifera
Oeu027830.1 Olea europaea
Oeu027831.1 Olea europaea
Oeu060127.1 Olea europaea
Os07g0150200 Oryza sativa ssp. japonica
Os07g0229900 Oryza sativa ssp. japonica
Peaxi162Scf00011g00818 Petunia axillaris
Peaxi162Scf00835g00012 Petunia axillaris
PGR102G2299 Punica granatum
PGR142G3762 Punica granatum
PGSC0003DMG400009128 Solanum tuberosum
PGSC0003DMG400024929 Solanum tuberosum
PGSC0003DMG400028631 Solanum tuberosum
PGSC0003DMG400035638 Solanum tuberosum
Phvul.003G138356 Phaseolus vulgaris
Phvul.005G182200 Phaseolus vulgaris
Phvul.010G160500 Phaseolus vulgaris
Potri.001G046600 Populus trichocarpa
Potri.002G056200 Populus trichocarpa
Potri.003G181200 Populus trichocarpa
Potri.005G206300 Populus trichocarpa
Pp3c12_3210 Physcomitrium patens
Pp3c16_7980 Physcomitrium patens
Pp3c17_3630 Physcomitrium patens
PRCOL_00006177 Prasinoderma coloniale
Prupe.3G097200 Prunus persica
Prupe.7G260600 Prunus persica
Psat2g176680 Pisum sativum
Psat7g045920 Pisum sativum
Psat7g259480 Pisum sativum
PSO017G2319 Papaver somniferum
PSO170G2869 Papaver somniferum
PSO210G7436 Papaver somniferum
PSO302G0097 Papaver somniferum
QL02p092742 Quercus lobata
QL05p035455 Quercus lobata
RcHm_v2.0_Chr2g0085931 Rosa chinensis
RcHm_v2.0_Chr2g0133131 Rosa chinensis
RcHm_v2.0_Chr4g0388751 Rosa chinensis
RcHm_v2.0_Chr7g0179921 Rosa chinensis
Rhsim08G0207400 Rhododendron simsii
Rhsim13G0177500 Rhododendron simsii
Sabra01G0032200 Salix brachista
Sabra02G0045500 Salix brachista
Sabra05G0016900 Salix brachista
Sabra05G0017300 Salix brachista
Sabra05G0156900 Salix brachista
Sabra19G0035800 Salix brachista
SalBow3G0153 Salvia bowleyana
SalBow7G3702 Salvia bowleyana
Sc10g0008270 Simmondsia chinensis
Sc10g0008300 Simmondsia chinensis
Sc10g0008310 Simmondsia chinensis
Sc18g0007600 Simmondsia chinensis
Sed0004247 Sechium edule
Sed0007614 Sechium edule
Sed0008502 Sechium edule
Sed0016955 Sechium edule
SGA_v2.0_scaffold42G15920 Striga asiatica
SGA_v2.0_scaffold5G02775 Striga asiatica
SGA_v2.0_scaffold8G04431 Striga asiatica
SMO147G0090 Selaginella moellendorffii
Solyc01g103800.3 Solanum lycopersicum
Solyc03g083290.4 Solanum lycopersicum
Solyc12g042650.2 Solanum lycopersicum
Sopen01g046200 Solanum pennellii
Sopen03g023040 Solanum pennellii
Sopen04g020940 Solanum pennellii
Sopen12g021800 Solanum pennellii
Sp1g14240 Schrenkiella parvula
Sp4g14470 Schrenkiella parvula
TAR383G0564 Trochodendron aralioides
TAR625G0549 Trochodendron aralioides
TAR636G0031 Trochodendron aralioides
THA.LOC104808179 Tarenaya hassleriana
THA.LOC104812430 Tarenaya hassleriana
THA.LOC104814014 Tarenaya hassleriana
Thecc.06G040300 Theobroma cacao
Thecc.09G033200 Theobroma cacao
Thhalv10009044m.g Eutrema salsugineum
Thhalv10017388m.g Eutrema salsugineum
TPR.G18115 Trifolium pratense
TPR.G37329 Trifolium pratense
TPR.G38791 Trifolium pratense
TWI12G0923 Tripterygium wilfordii
TWI23G0608 Tripterygium wilfordii
TWI59G1232 Tripterygium wilfordii
unitig_699.g19852 Utricularia gibba
unitig_747.g21263 Utricularia gibba
vmacro07317 Vaccinium macrocarpon
vmacro07318 Vaccinium macrocarpon
vmacro19046 Vaccinium macrocarpon
VMungo0720G0275 Vigna mungo
VMungo1080G1734 Vigna mungo
VMungo1215G1204 Vigna mungo
Zm00001eb095080 Zea mays
Zm00001eb296700 Zea mays
Zm00001eb303720 Zea mays
Zm00001eb348960 Zea mays

User provided reference genes

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