Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p31530 Brassica napus
A04p07830 Brassica napus
A07p08850 Brassica napus
A08p12910 Brassica napus
A08p24320 Brassica napus
Aa31LG8G9990 Aethionema arabicum
Aa31LG9G3080 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.916 Anthoceros agrestis
Actinidia23464 Actinidia chinensis
Actinidia26624 Actinidia chinensis
Actinidia40201 Actinidia chinensis
Ah.14g087330 Amaranthus hybridus
AL3G28580 Arabidopsis lyrata
AL3G38200 Arabidopsis lyrata
AL7G37580 Arabidopsis lyrata
AL7G42000 Arabidopsis lyrata
Aqoxy2G03228 Aquilegia oxysepala
Aqoxy4G02257 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.6H6MU0 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.7I5575 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.H6FGN8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HGPF18 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LG4QKN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LNA207 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LT40GI Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NP1GNU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PD899G Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Q67FBH Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.T2BILM Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.V0GQ55 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZVK5KU Arachis hypogaea
AT3G23540 Arabidopsis thaliana
AT4G14290 Arabidopsis thaliana
AT4G17150 Arabidopsis thaliana
ATR0626G027 Amborella trichopoda
ATR0751G113 Amborella trichopoda
Atru.chr1.2207 Acer truncatum
Atru.chr1.2226 Acer truncatum
Atru.chr4.2667 Acer truncatum
Atru.chr4.2668 Acer truncatum
AUR62015194 Chenopodium quinoa
AUR62021798 Chenopodium quinoa
AUR62022512 Chenopodium quinoa
AUR62038384 Chenopodium quinoa
BcaB02g08621 Brassica carinata
BcaB04g18400 Brassica carinata
BcaB04g20445 Brassica carinata
BcaB06g26503 Brassica carinata
BcaB06g26504 Brassica carinata
BcaC02g09336 Brassica carinata
BcaC06g35538 Brassica carinata
BcaC07g38053 Brassica carinata
BolC1t03984H Brassica oleracea
BolC3t19944H Brassica oleracea
BolC4t25728H Brassica oleracea
BolC7t41866H Brassica oleracea
BolC8t48438H Brassica oleracea
BraA01t03283Z Brassica rapa
BraA04t16471Z Brassica rapa
BraA07t28676Z Brassica rapa
BraA08t33274Z Brassica rapa
BraA08t34387Z Brassica rapa
C01p40230 Brassica napus
C03p76890 Brassica napus
C04p41460 Brassica napus
C07p13710 Brassica napus
CAN.G1456.14 Capsicum annuum
CAN.G522.7 Capsicum annuum
CANSAT78G1916 Cannabis sativa
CARHR099440 Cardamine hirsuta
CARHR220470 Cardamine hirsuta
CARHR223720 Cardamine hirsuta
Carub.0003s2374 Capsella rubella
Carub.0007s2426 Capsella rubella
Carub.0007s2802 Capsella rubella
Ca_00609_v3 Cicer arietinum L.
Ca_13512_v3 Cicer arietinum L.
Ca_13516_v3 Cicer arietinum L.
Ca_21577_v3 Cicer arietinum L.
Ca_24686_v3 Cicer arietinum L.
Ca_28266_v3 Cicer arietinum L.
Ca_29751_v3 Cicer arietinum L.
CBR_g17709 Chara braunii
Cc03_g02950 Coffea canephora
Cc09_g00070 Coffea canephora
CDE02G3163 Ceratophyllum demersum
CDE05G0361 Ceratophyllum demersum
CDE05G2023 Ceratophyllum demersum
CDE05G3653 Ceratophyllum demersum
CDE11G0556 Ceratophyllum demersum
Cfa015556 Carpinus fangiana
Cfa021531 Carpinus fangiana
Ciclev10004606m.g Citrus clementina
Ciclev10015057m.g Citrus clementina
CiPaw.01G158100 Carya illinoinensis
CiPaw.02G090500 Carya illinoinensis
CiPaw.09G113100 Carya illinoinensis
CiPaw.10G085000 Carya illinoinensis
ClCG01G021010 Citrullus lanatus
ClCG06G005700 Citrullus lanatus
COL.COLO4_21623 Corchorus olitorius
COL.COLO4_21624 Corchorus olitorius
COL.COLO4_31968 Corchorus olitorius
Cpa.g.sc16.49 Carica papaya
Cpa.g.sc27.184 Carica papaya
Cre07.g328950 Chlamydomonas reinhardtii
CsaV3_6G005450 Cucumis sativus L.
CsaV3_6G048000 Cucumis sativus L.
CSS0003902 Camellia sinensis var. sinensis
CSS0016196 Camellia sinensis var. sinensis
CSS0021898 Camellia sinensis var. sinensis
CSS0027112 Camellia sinensis var. sinensis
CSS0044954 Camellia sinensis var. sinensis
CSS0044955 Camellia sinensis var. sinensis
DCAR_000334 Daucus carota
DCAR_002423 Daucus carota
DCAR_005489 Daucus carota
Dinv04378 Davidia involucrata
Dinv14850 Davidia involucrata
Dinv16916 Davidia involucrata
Dinv44468 Davidia involucrata
Duzib151G1139 Durio zibethinus
Duzib192G1072 Durio zibethinus
Duzib212G0564 Durio zibethinus
ECA150G0003 Erigeron canadensis
ECA234G3826 Erigeron canadensis
EL10Ac8g20281 Beta vulgaris
EL10As19g24188 Beta vulgaris
Eucgr.B01162 Eucalyptus grandis
Eucgr.E04233 Eucalyptus grandis
FAN07G2289 Fragaria x ananassa
FAN12G2278 Fragaria x ananassa
FAN21G3334 Fragaria x ananassa
FAN22G0102 Fragaria x ananassa
FAN25G3252 Fragaria x ananassa
FvH4_3g00060 Fragaria vesca
FvH4_4g14200 Fragaria vesca
Glyma.02G139950 Glycine max
Glyma.04G137300 Glycine max
Glyma.07G255200 Glycine max
Glyma.07G270200 Glycine max
Glyma.09G017500 Glycine max
Glyma.13G210700 Glycine max
Glyma.15G102100 Glycine max
Glyma.15G123200 Glycine max
Glyma.17G003700 Glycine max
Glyma.17G019100 Glycine max
Gohir.A05G177100 Gossypium hirsutum
Gohir.A10G115700 Gossypium hirsutum
Gohir.D05G180500 Gossypium hirsutum
Gohir.D10G150800 Gossypium hirsutum
Gorai.009G185500 Gossypium raimondii
Gorai.011G168000 Gossypium raimondii
GSVIVG01007067001 Vitis vinifera
GSVIVG01017869001 Vitis vinifera
HanXRQChr10g0310201 Helianthus annuus
HanXRQChr12g0359451 Helianthus annuus
HanXRQChr15g0470191 Helianthus annuus
Haze_00985 Corylus avellana
Haze_07062 Corylus avellana
Haze_07063 Corylus avellana
Hma1.2p1_0394F.1_g143410 Hydrangea macrophylla
Hma1.2p1_0511F.1_g169150 Hydrangea macrophylla
HPP92_012061 Vanilla planifolia
HPP92_012078 Vanilla planifolia
HPP92_021919 Vanilla planifolia
HPP92_027044 Vanilla planifolia
Hund12556 Selenicereus undatus
Lalb_Chr07g0177421 Lupinus albus
Lalb_Chr13g0304411 Lupinus albus
Lalb_Chr15g0088461 Lupinus albus
Lalb_Chr18g0057571 Lupinus albus
Lalb_Chr20g0118331 Lupinus albus
Lj2C254G8 Lonicera japonica
Lj4g0014611 Lotus japonicus
Lj4g0028246 Lotus japonicus
Lj6C664T14 Lonicera japonica
Lj6g0027253 Lotus japonicus
Lj6g0027793 Lotus japonicus
Lsat_1_v5_gn_5_78420 Lactuca sativa
Lsat_1_v5_gn_8_110041 Lactuca sativa
Manes.03G186500 Manihot esculenta
Manes.08G014800 Manihot esculenta
Manes.15G021600 Manihot esculenta
Mapoly0016s0015 Marchantia polymorpha
MBI14_g12728_MAGBIO Magnolia biondii
MBI15_g26854_MAGBIO Magnolia biondii
MBI17_g29605_MAGBIO Magnolia biondii
MCO09G851 Micromonas commoda
MD05G1364500 Malus domestica
MD10G1342200 Malus domestica
MD10G1342300 Malus domestica
MD13G1180700 Malus domestica
MD16G1181400 Malus domestica
Medtr2g021260 Medicago truncatula
Medtr2g027870 Medicago truncatula
Medtr4g117570 Medicago truncatula
Medtr4g134350 Medicago truncatula
MELO3C007987.2 Cucumis melo
MELO3C021392.2 Cucumis melo
Migut.M01480 Erythranthe guttata
Migut.N00141 Erythranthe guttata
MSTRG.16076 Avicennia marina
MSTRG.21828 Avicennia marina
MSTRG.24761 Avicennia marina
MSTRG.7106 Avicennia marina
Nitab4.5_0000147g0120 Nicotiana tabacum
Nitab4.5_0001663g0220 Nicotiana tabacum
Nitab4.5_0006569g0040 Nicotiana tabacum
Nn1g02133 Nelumbo nucifera
Nn1g07647 Nelumbo nucifera
Nn4g26155 Nelumbo nucifera
Oeu016930.1 Olea europaea
Oeu017918.1 Olea europaea
Oeu023654.1 Olea europaea
Oeu037670.3 Olea europaea
Os02g0197900 Oryza sativa ssp. japonica
Os03g0359000 Oryza sativa ssp. japonica
Os06g0609700 Oryza sativa ssp. japonica
Peaxi162Scf00095g00087 Petunia axillaris
Peaxi162Scf00563g00526 Petunia axillaris
PGR004G1581 Punica granatum
PGR031G2583 Punica granatum
PGR042G0848 Punica granatum
PGSC0003DMG400004348 Solanum tuberosum
PGSC0003DMG400027260 Solanum tuberosum
Phvul.003G089300 Phaseolus vulgaris
Phvul.003G096200 Phaseolus vulgaris
Phvul.006G134600 Phaseolus vulgaris
Phvul.006G155700 Phaseolus vulgaris
Potri.006G000700 Populus trichocarpa
Potri.008G200400 Populus trichocarpa
Potri.010G029200 Populus trichocarpa
Potri.016G001000 Populus trichocarpa
Pp3c12_23220 Physcomitrium patens
Pp3c4_3670 Physcomitrium patens
PRCOL_00003839 Prasinoderma coloniale
Prupe.1G148800 Prunus persica
Prupe.4G000500 Prunus persica
Psat0s2550g0040 Pisum sativum
Psat1g148640 Pisum sativum
Psat1g171320 Pisum sativum
Psat1g184880 Pisum sativum
Psat4g030600 Pisum sativum
Psat5g259880 Pisum sativum
PSO170G6742 Papaver somniferum
PSO407G0235 Papaver somniferum
PSO541G0268 Papaver somniferum
PSO675G8732 Papaver somniferum
QL05p066200 Quercus lobata
QL06p005887 Quercus lobata
RcHm_v2.0_Chr4g0419001 Rosa chinensis
RcHm_v2.0_Chr5g0000061 Rosa chinensis
Rhsim02G0087600 Rhododendron simsii
Sabra06G0000900 Salix brachista
Sabra10G0011900 Salix brachista
Sabra16G0007700 Salix brachista
SalBow8G3928 Salvia bowleyana
Sc19g0004670 Simmondsia chinensis
Sc24g0000030 Simmondsia chinensis
Sc24g0000500 Simmondsia chinensis
Sed0007994 Sechium edule
Sed0008129 Sechium edule
SEGI_01934 Sequoiadendron giganteum
SEGI_03497 Sequoiadendron giganteum
SEGI_23486 Sequoiadendron giganteum
SGA_v2.0_scaffold107G30773 Striga asiatica
SGA_v2.0_scaffold166G38387 Striga asiatica
SGA_v2.0_scaffold7G03652 Striga asiatica
SMO118G0161 Selaginella moellendorffii
Solyc01g080270.3 Solanum lycopersicum
Solyc04g015300.3 Solanum lycopersicum
Sopen01g032060 Solanum pennellii
Sopen04g007380 Solanum pennellii
Sp3g21200 Schrenkiella parvula
Sp7g12300 Schrenkiella parvula
Sp7g17040 Schrenkiella parvula
TAR362G0597 Trochodendron aralioides
TAR624G1228 Trochodendron aralioides
TAR626G0216 Trochodendron aralioides
TAR626G1613 Trochodendron aralioides
TAR636G1144 Trochodendron aralioides
THA.LOC104806750 Tarenaya hassleriana
THA.LOC104808656 Tarenaya hassleriana
Thecc.04G219300 Theobroma cacao
Thecc.06G244600 Theobroma cacao
Thhalv10020399m.g Eutrema salsugineum
Thhalv10024836m.g Eutrema salsugineum
Thhalv10027147m.g Eutrema salsugineum
TPR.G10484 Trifolium pratense
TPR.G20137 Trifolium pratense
TPR.G28917 Trifolium pratense
TPR.G5952 Trifolium pratense
TWI53G0188 Tripterygium wilfordii
TWI63G0140 Tripterygium wilfordii
TWI73G1105 Tripterygium wilfordii
unitig_32.g10791 Utricularia gibba
unitig_32.g11407 Utricularia gibba
unitig_748.g7615 Utricularia gibba
unitig_748.g8354 Utricularia gibba
vmacro08253 Vaccinium macrocarpon
vmacro15707 Vaccinium macrocarpon
VMungo0540G1913 Vigna mungo
VMungo0540G1948 Vigna mungo
VMungo0647G0037 Vigna mungo
VMungo1215G0347 Vigna mungo
VMungo1215G0371 Vigna mungo
Zm00001eb017460 Zea mays
Zm00001eb236070 Zea mays
Zm00001eb276160 Zea mays

User provided reference genes

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