Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p40330 Brassica napus
A05p40550 Brassica napus
A06p00010 Brassica napus
Aa31LG10G370 Aethionema arabicum
Aa31LG5G18240 Aethionema arabicum
Aa31LG8G430 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.2480 Anthoceros agrestis
Actinidia04991 Actinidia chinensis
Actinidia07851 Actinidia chinensis
Actinidia18828 Actinidia chinensis
Actinidia20602 Actinidia chinensis
Actinidia20615 Actinidia chinensis
Actinidia30382 Actinidia chinensis
Actinidia30383 Actinidia chinensis
Actinidia35198 Actinidia chinensis
Actinidia35199 Actinidia chinensis
Actinidia35414 Actinidia chinensis
Actinidia37135 Actinidia chinensis
Actinidia37136 Actinidia chinensis
Ah.01g014020 Amaranthus hybridus
Ah.01g014030 Amaranthus hybridus
Ah.06g181000 Amaranthus hybridus
Ah.06g181010 Amaranthus hybridus
AL1G63940 Arabidopsis lyrata
AL3G19020 Arabidopsis lyrata
AL3G24990 Arabidopsis lyrata
arahy.Tifrunner.gnm1.ann1.55ZT83 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.64WI7D Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.7R5YE1 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HRA0AN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HX01UU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.P32D72 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WLXW46 Arachis hypogaea
AT1G55820 Arabidopsis thaliana
AT3G07660 Arabidopsis thaliana
AT3G13222 Arabidopsis thaliana
ATR0751G250 Amborella trichopoda
Atru.chr2.3746 Acer truncatum
Atru.chr2.3760 Acer truncatum
Atru.chr6.3425 Acer truncatum
AUR62014988 Chenopodium quinoa
AUR62017140 Chenopodium quinoa
AUR62029132 Chenopodium quinoa
AUR62035667 Chenopodium quinoa
BcaB04g21004 Brassica carinata
BcaB04g21276 Brassica carinata
BcaB07g33187 Brassica carinata
BcaC05g29559 Brassica carinata
BcaC05g29561 Brassica carinata
BcaC08g43655 Brassica carinata
BolC1t05134H Brassica oleracea
BolC1t05539H Brassica oleracea
BolC5t34620H Brassica oleracea
BolC6t36158H Brassica oleracea
BraA01t04068Z Brassica rapa
BraA01t04369Z Brassica rapa
BraA05t22786Z Brassica rapa
BraA06t23217Z Brassica rapa
C01p51860 Brassica napus
C05p59660 Brassica napus
C06p10720 Brassica napus
CAN.G1071.5 Capsicum annuum
CAN.G550.1 Capsicum annuum
CAN.G623.30 Capsicum annuum
CANSAT56G1119 Cannabis sativa
CANSAT64G1317 Cannabis sativa
CARHR045520 Cardamine hirsuta
CARHR082360 Cardamine hirsuta
CARHR087820 Cardamine hirsuta
Carub.0001s4439 Capsella rubella
Carub.0003s0724 Capsella rubella
Carub.0003s1258 Capsella rubella
Ca_05555_v3 Cicer arietinum L.
Ca_06410_v3 Cicer arietinum L.
Ca_16336_v3 Cicer arietinum L.
Cc05_g02040 Coffea canephora
Cc05_g15180 Coffea canephora
CDE10G0738 Ceratophyllum demersum
CDE10G1051 Ceratophyllum demersum
CDE10G1300 Ceratophyllum demersum
Cfa014207 Carpinus fangiana
Cfa016923 Carpinus fangiana
Ciclev10007522m.g Citrus clementina
Ciclev10014215m.g Citrus clementina
CiPaw.03G283300 Carya illinoinensis
CiPaw.04G197800 Carya illinoinensis
CiPaw.12G140100 Carya illinoinensis
ClCG02G002990 Citrullus lanatus
COL.COLO4_07736 Corchorus olitorius
COL.COLO4_19648 Corchorus olitorius
Cpa.g.sc12.132 Carica papaya
Cpa.g.sc136.47 Carica papaya
CsaV3_7G002410 Cucumis sativus L.
CSS0001451 Camellia sinensis var. sinensis
CSS0003588 Camellia sinensis var. sinensis
CSS0015139 Camellia sinensis var. sinensis
CSS0046156 Camellia sinensis var. sinensis
CSS0048251 Camellia sinensis var. sinensis
DCAR_008746 Daucus carota
DCAR_021087 Daucus carota
Dinv05320 Davidia involucrata
Dinv13270 Davidia involucrata
Dinv21318 Davidia involucrata
Dinv40880 Davidia involucrata
Duzib133G1139 Durio zibethinus
Duzib138G1901 Durio zibethinus
Duzib170G0032 Durio zibethinus
Duzib213G0181 Durio zibethinus
ECA236G1229 Erigeron canadensis
ECA236G3584 Erigeron canadensis
ECA240G3993 Erigeron canadensis
EL10Ac4g07531 Beta vulgaris
EL10Ac9g22656 Beta vulgaris
Eucgr.F03678 Eucalyptus grandis
Eucgr.K01392 Eucalyptus grandis
FAN02G0619 Fragaria x ananassa
FAN05G3894 Fragaria x ananassa
FAN09G3478 Fragaria x ananassa
FAN11G3880 Fragaria x ananassa
FAN14G1326 Fragaria x ananassa
FAN16G1357 Fragaria x ananassa
FAN21G2989 Fragaria x ananassa
FAN25G3046 Fragaria x ananassa
FvH4_3g42501 Fragaria vesca
FvH4_6g40450 Fragaria vesca
Glyma.02G222900 Glycine max
Glyma.02G302000 Glycine max
Glyma.14G012200 Glycine max
Glyma.14G189900 Glycine max
Gohir.A01G093300 Gossypium hirsutum
Gohir.A04G005500 Gossypium hirsutum
Gohir.A07G087000 Gossypium hirsutum
Gohir.A11G148100 Gossypium hirsutum
Gohir.A13G131300 Gossypium hirsutum
Gohir.D01G077800 Gossypium hirsutum
Gohir.D05G384200 Gossypium hirsutum
Gohir.D07G091900 Gossypium hirsutum
Gohir.D11G154900 Gossypium hirsutum
Gohir.D13G134700 Gossypium hirsutum
Gorai.001G098400 Gossypium raimondii
Gorai.002G102300 Gossypium raimondii
Gorai.007G165200 Gossypium raimondii
Gorai.009G451000 Gossypium raimondii
Gorai.013G150900 Gossypium raimondii
GSVIVG01014730001 Vitis vinifera
GSVIVG01030121001 Vitis vinifera
HanXRQChr03g0074981 Helianthus annuus
HanXRQChr07g0206231 Helianthus annuus
HanXRQChr10g0293591 Helianthus annuus
HanXRQChr11g0329451 Helianthus annuus
HanXRQChr11g0334391 Helianthus annuus
Haze_09854 Corylus avellana
Haze_12593 Corylus avellana
Hma1.2p1_0599F.1_g187000 Hydrangea macrophylla
HPP92_018907 Vanilla planifolia
HPP92_018975 Vanilla planifolia
HPP92_018976 Vanilla planifolia
HPP92_018977 Vanilla planifolia
HPP92_019328 Vanilla planifolia
HPP92_019779 Vanilla planifolia
HPP92_019780 Vanilla planifolia
Hund01531 Selenicereus undatus
Hund23052 Selenicereus undatus
Lalb_Chr04g0247791 Lupinus albus
Lalb_Chr04g0252471 Lupinus albus
Lalb_Chr10g0103121 Lupinus albus
Lalb_Chr10g0107481 Lupinus albus
Lalb_Chr15g0082261 Lupinus albus
Lalb_Chr17g0344881 Lupinus albus
Lalb_Chr20g0114081 Lupinus albus
Lj1A893T54 Lonicera japonica
Lj1C799G7 Lonicera japonica
Lj2g0008850 Lotus japonicus
Lj8A137T51 Lonicera japonica
LjContig00081g0024523 Lotus japonicus
LjContig00155g0013055 Lotus japonicus
LjContig00155g0016745 Lotus japonicus
Lsat_1_v5_gn_5_101720 Lactuca sativa
Lsat_1_v5_gn_6_71600 Lactuca sativa
Lsat_1_v5_gn_7_114181 Lactuca sativa
Lsat_1_v5_gn_7_97301 Lactuca sativa
Lsat_1_v5_gn_9_102540 Lactuca sativa
Manes.12G063603 Manihot esculenta
Manes.13G060300 Manihot esculenta
Manes.15G057800 Manihot esculenta
Mapoly0125s0020 Marchantia polymorpha
MBI06_g02307_MAGBIO Magnolia biondii
MBI07_g46096_MAGBIO Magnolia biondii
MBI14_g37016_MAGBIO Magnolia biondii
MBI15_g44613_MAGBIO Magnolia biondii
MBI18_g42577_MAGBIO Magnolia biondii
MBI19_g11109_MAGBIO Magnolia biondii
MD03G1031400 Malus domestica
MD09G1129800 Malus domestica
MD11G1035700 Malus domestica
MD17G1118800 Malus domestica
Medtr5g069290 Medicago truncatula
Medtr5g096290 Medicago truncatula
MELO3C024186.2 Cucumis melo
Migut.M00057 Erythranthe guttata
MSTRG.14911 Avicennia marina
Nitab4.5_0000006g0540 Nicotiana tabacum
Nitab4.5_0000152g0380 Nicotiana tabacum
Nitab4.5_0003086g0030 Nicotiana tabacum
Nitab4.5_0005354g0040 Nicotiana tabacum
Nitab4.5_0006405g0020 Nicotiana tabacum
Nitab4.5_0011006g0010 Nicotiana tabacum
Nn1g07557 Nelumbo nucifera
Nn1g07761 Nelumbo nucifera
Oeu034271.2 Olea europaea
Oeu051385.1 Olea europaea
Oeu051386.1 Olea europaea
Oeu056861.2 Olea europaea
Os09g0261400 Oryza sativa ssp. japonica
Peaxi162Scf00581g00212 Petunia axillaris
Peaxi162Scf00612g00015 Petunia axillaris
PGR031G0430 Punica granatum
PGSC0003DMG400022269 Solanum tuberosum
Phvul.008G189700 Phaseolus vulgaris
Phvul.008G280600 Phaseolus vulgaris
Potri.001G370900 Populus trichocarpa
Potri.002G217000 Populus trichocarpa
Potri.011G079800 Populus trichocarpa
Potri.014G169900 Populus trichocarpa
Pp3c15_10620 Physcomitrium patens
Pp3c9_4260 Physcomitrium patens
Pp3c9_8210 Physcomitrium patens
Pp3c9_9170 Physcomitrium patens
Prupe.3G195400 Prunus persica
Prupe.6G026700 Prunus persica
Psat0s219g0040 Pisum sativum
Psat0s3066g0280 Pisum sativum
Psat0s370g0040 Pisum sativum
Psat0s999g0080 Pisum sativum
Psat2g006600 Pisum sativum
Psat2g016760 Pisum sativum
Psat2g060320 Pisum sativum
Psat4g040720 Pisum sativum
Psat4g084960 Pisum sativum
Psat4g120600 Pisum sativum
Psat7g176360 Pisum sativum
Psat7g229000 Pisum sativum
PSO210G5111 Papaver somniferum
PSO210G7110 Papaver somniferum
PSO541G3380 Papaver somniferum
PSO675G6761 Papaver somniferum
QL04p067065 Quercus lobata
QL08p003290 Quercus lobata
RcHm_v2.0_Chr2g0155681 Rosa chinensis
RcHm_v2.0_Chr5g0076171 Rosa chinensis
RcHm_v2.0_Chr5g0076181 Rosa chinensis
Rhsim04G0011000 Rhododendron simsii
Rhsim04G0030800 Rhododendron simsii
Rhsim05G0173200 Rhododendron simsii
Rhsim06G0178500 Rhododendron simsii
Sabra11G0068600 Salix brachista
Sabra11G0070700 Salix brachista
Sabra14G0129500 Salix brachista
Sabra16G0243300 Salix brachista
SalBow8G0936 Salvia bowleyana
Sc06g0009940 Simmondsia chinensis
Sc21g0000450 Simmondsia chinensis
Sed0020960 Sechium edule
Sed0021061 Sechium edule
SEGI_08865 Sequoiadendron giganteum
SEGI_17496 Sequoiadendron giganteum
SEGI_20158 Sequoiadendron giganteum
SGA_v2.0_scaffold171G38848 Striga asiatica
SGA_v2.0_scaffold181G39696 Striga asiatica
SGA_v2.0_scaffold73G24491 Striga asiatica
SMO356G0485 Selaginella moellendorffii
Solyc05g018750.4 Solanum lycopersicum
Solyc07g045230.4 Solanum lycopersicum
Solyc07g065745.1 Solanum lycopersicum
Sopen05g017000 Solanum pennellii
Sopen07g023780 Solanum pennellii
Sopen07g033960 Solanum pennellii
Sp1g41400 Schrenkiella parvula
Sp3g06600 Schrenkiella parvula
Sp3g11400 Schrenkiella parvula
TAR624G1030 Trochodendron aralioides
TAR626G1137 Trochodendron aralioides
TAR627G0712 Trochodendron aralioides
TAR629G0676 Trochodendron aralioides
TAR629G2527 Trochodendron aralioides
TAR629G3408 Trochodendron aralioides
THA.LOC104802632 Tarenaya hassleriana
THA.LOC104819030 Tarenaya hassleriana
THA.LOC104822439 Tarenaya hassleriana
THA.LOC104822725 Tarenaya hassleriana
Thecc.01G198800 Theobroma cacao
Thecc.07G008900 Theobroma cacao
Thhalv10011305m.g Eutrema salsugineum
Thhalv10020055m.g Eutrema salsugineum
TPR.G1296 Trifolium pratense
TPR.G13836 Trifolium pratense
TPR.G27467 Trifolium pratense
TPR.G30593 Trifolium pratense
TWI18G0007 Tripterygium wilfordii
TWI36G0804 Tripterygium wilfordii
TWI39G1164 Tripterygium wilfordii
TWI75G1666 Tripterygium wilfordii
unitig_746.g26640 Utricularia gibba
unitig_746.g26645 Utricularia gibba
unitig_899.g15344 Utricularia gibba
vmacro09471 Vaccinium macrocarpon
vmacro09472 Vaccinium macrocarpon
vmacro09629 Vaccinium macrocarpon
vmacro12065 Vaccinium macrocarpon
vmacro13130 Vaccinium macrocarpon
VMungo0647G0328 Vigna mungo
Zm00001eb177380 Zea mays

User provided reference genes

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