Gene: AT1G55820
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT1G55820
- Transcript Identifier AT1G55820.1
- Gene Type Coding gene
- Location Chr1 : 20864397-20867418 : positive
Gene Family Information
- ID HOM05D002148
- #Genes/#Species 312/94
- Phylogenetic origin
- ID ORTHO05D012285
- #Genes/#Species 23/11
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT1G55820.1
- uniprot A4FVR1
Descriptions
- Description lysine-specific demethylase, putative (DUF1296)
- Computational description CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1296 (InterPro:IPR009719); BEST Arabidopsis thaliana protein match is: GBF-interacting protein 1 (TAIR:AT3G13222.1); Has 1074 Blast hits to 540 proteins in 140 species: Archae - 0; Bacteria - 57; Metazoa - 222; Fungi - 108; Plants - 188; Viruses - 12; Other Eukaryotes - 487 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0008150 | ND | Gene Ontology | biological_process |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0051082 | IBA | Gene Ontology | unfolded protein binding | 1 |
| GO:0005515 | IEA | InterPro | protein binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IEA | GOA Database | nucleus | |
| GO:0005634 | IDA ISM, IBA | Gene Ontology | nucleus | 1 2 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |