Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p11580 Brassica napus
A08p26060 Brassica napus
A09p38330 Brassica napus
Aa31sc113G50 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.1582 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.183 Anthoceros agrestis
Actinidia00373 Actinidia chinensis
Actinidia00374 Actinidia chinensis
Actinidia10193 Actinidia chinensis
Actinidia22690 Actinidia chinensis
Actinidia38102 Actinidia chinensis
Ah.11g039780 Amaranthus hybridus
AL1G41310 Arabidopsis lyrata
Aqoxy1G02357 Aquilegia oxysepala
Aqoxy1G02406 Aquilegia oxysepala
Aqoxy1G02502 Aquilegia oxysepala
Aqoxy1G02669 Aquilegia oxysepala
Aqoxy1G02887 Aquilegia oxysepala
Aqoxy1G03040 Aquilegia oxysepala
Aqoxy2G02320 Aquilegia oxysepala
Aqoxy5G00879 Aquilegia oxysepala
Aqoxy5G03178 Aquilegia oxysepala
Aqoxy5G03179 Aquilegia oxysepala
Aqoxy6G02657 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0MR8KE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.60DR5P Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.68HS6I Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.9ZRQ90 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.C0RFJ6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.C26UD9 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CH195H Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HFKR07 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KXTN9G Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VTP83K Arachis hypogaea
AT1G27760 Arabidopsis thaliana
ATR0208G038 Amborella trichopoda
Atru.chr13.822 Acer truncatum
AUR62022485 Chenopodium quinoa
AUR62037427 Chenopodium quinoa
BcaB03g13968 Brassica carinata
BcaB08g34833 Brassica carinata
BcaC01g01568 Brassica carinata
BcaC01g01569 Brassica carinata
BcaC01g01570 Brassica carinata
BcaC05g26776 Brassica carinata
BcaC06g35320 Brassica carinata
BcaNung06154 Brassica carinata
BolC3t19708H Brassica oleracea
BolC5t31367H Brassica oleracea
BolC7t42251H Brassica oleracea
BraA07t28946Z Brassica rapa
BraA08t34556Z Brassica rapa
BraA09t39343Z Brassica rapa
C03p74600 Brassica napus
C05p26460 Brassica napus
C07p17460 Brassica napus
CAN.G107.49 Capsicum annuum
CAN.G504.35 Capsicum annuum
CAN.G724.13 Capsicum annuum
CANSAT25G1442 Cannabis sativa
CANSAT80G1456 Cannabis sativa
CARHR027280 Cardamine hirsuta
Carub.0001s2628 Capsella rubella
Ca_15902_v3 Cicer arietinum L.
CBR_g3782 Chara braunii
Cc10_g05710 Coffea canephora
CDE02G2866 Ceratophyllum demersum
CDE04G2518 Ceratophyllum demersum
Ciclev10001181m.g Citrus clementina
CiPaw.07G175700 Carya illinoinensis
CiPaw.08G049800 Carya illinoinensis
ClCG05G020570 Citrullus lanatus
COL.COLO4_28515 Corchorus olitorius
Cpa.g.sc142.18 Carica papaya
Cre03.g202500 Chlamydomonas reinhardtii
CsaV3_4G035010 Cucumis sativus L.
CSS0013335 Camellia sinensis var. sinensis
CSS0015739 Camellia sinensis var. sinensis
CSS0028243 Camellia sinensis var. sinensis
CSS0038052 Camellia sinensis var. sinensis
DCAR_009883 Daucus carota
DCAR_013721 Daucus carota
DCAR_016840 Daucus carota
DCAR_020073 Daucus carota
Dinv04580 Davidia involucrata
Dinv39230 Davidia involucrata
Dinv44960 Davidia involucrata
Duzib041G0730 Durio zibethinus
Duzib052G0091 Durio zibethinus
Duzib093G0932 Durio zibethinus
Duzib116G0883 Durio zibethinus
ECA232G3220 Erigeron canadensis
ECA246G3335 Erigeron canadensis
EL10Ac1g02389 Beta vulgaris
Eucgr.F02256 Eucalyptus grandis
Eucgr.I01064 Eucalyptus grandis
FAN04G0376 Fragaria x ananassa
FAN15G1432 Fragaria x ananassa
FAN15G1988 Fragaria x ananassa
FAN15G2993 Fragaria x ananassa
FAN18G1869 Fragaria x ananassa
FAN19G2748 Fragaria x ananassa
FAN20G1995 Fragaria x ananassa
FAN20G2377 Fragaria x ananassa
FAN20G3115 Fragaria x ananassa
FAN24G1433 Fragaria x ananassa
FAN24G2013 Fragaria x ananassa
FAN24G2138 Fragaria x ananassa
FAN24G2512 Fragaria x ananassa
FAN26G1173 Fragaria x ananassa
FAN26G3182 Fragaria x ananassa
FAN27G0263 Fragaria x ananassa
FAN27G1056 Fragaria x ananassa
FAN27G1207 Fragaria x ananassa
FAN27G1338 Fragaria x ananassa
FvH4_1g08070 Fragaria vesca
FvH4_2g04330 Fragaria vesca
FvH4_2g32270 Fragaria vesca
FvH4_2g33200 Fragaria vesca
FvH4_5g33120 Fragaria vesca
Glyma.04G045600 Glycine max
Glyma.06G046300 Glycine max
Glyma.14G089009 Glycine max
Glyma.17G235100 Glycine max
Gohir.A02G017701 Gossypium hirsutum
Gohir.A02G081200 Gossypium hirsutum
Gohir.A05G209400 Gossypium hirsutum
Gohir.A05G263101 Gossypium hirsutum
Gohir.A06G111004 Gossypium hirsutum
Gohir.A07G032566 Gossypium hirsutum
Gohir.A07G129601 Gossypium hirsutum
Gohir.A07G155050 Gossypium hirsutum
Gohir.A09G170450 Gossypium hirsutum
Gohir.A10G175251 Gossypium hirsutum
Gohir.A13G046500 Gossypium hirsutum
Gohir.A13G189950 Gossypium hirsutum
Gohir.D02G088900 Gossypium hirsutum
Gohir.D03G104750 Gossypium hirsutum
Gohir.D04G071950 Gossypium hirsutum
Gohir.D05G212800 Gossypium hirsutum
Gohir.D05G265300 Gossypium hirsutum
Gohir.D07G033450 Gossypium hirsutum
Gohir.D08G111408 Gossypium hirsutum
Gohir.D10G122550 Gossypium hirsutum
Gohir.D13G042500 Gossypium hirsutum
Gorai.003G110700 Gossypium raimondii
Gorai.005G099600 Gossypium raimondii
Gorai.007G097500 Gossypium raimondii
Gorai.009G219300 Gossypium raimondii
Gorai.009G277100 Gossypium raimondii
Gorai.011G135000 Gossypium raimondii
Gorai.013G050400 Gossypium raimondii
GSVIVG01009354001 Vitis vinifera
GSVIVG01009839001 Vitis vinifera
GSVIVG01037843001 Vitis vinifera
HanXRQChr01g0027951 Helianthus annuus
HanXRQChr06g0175321 Helianthus annuus
HanXRQChr09g0266701 Helianthus annuus
Haze_22448 Corylus avellana
Hma1.2p1_0819F.1_g223760 Hydrangea macrophylla
Hma1.2p1_1059F.1_g252940 Hydrangea macrophylla
HPP92_009539 Vanilla planifolia
Hund24035 Selenicereus undatus
Lalb_Chr02g0144991 Lupinus albus
Lalb_Chr08g0245541 Lupinus albus
Lalb_Chr22g0355651 Lupinus albus
Lalb_Chr23g0267501 Lupinus albus
Lj1g0026971 Lotus japonicus
Lj4A70G38 Lonicera japonica
Lj4A759T44 Lonicera japonica
Lj4A759T45 Lonicera japonica
Lj5A219T39 Lonicera japonica
Lj5g0009817 Lotus japonicus
Lsat_1_v5_gn_3_33441 Lactuca sativa
Lsat_1_v5_gn_4_131141 Lactuca sativa
Lsat_1_v5_gn_4_93941 Lactuca sativa
Lsat_1_v5_gn_6_112361 Lactuca sativa
Lsat_1_v5_gn_6_23981 Lactuca sativa
Manes.05G181400 Manihot esculenta
Manes.18G045800 Manihot esculenta
Mapoly0071s0061 Marchantia polymorpha
MBI16_g01178_MAGBIO Magnolia biondii
MBI16_g01179_MAGBIO Magnolia biondii
MBI16_g01180_MAGBIO Magnolia biondii
MBI18_g24148_MAGBIO Magnolia biondii
MD00G1169900 Malus domestica
MD00G1170100 Malus domestica
MD08G1085400 Malus domestica
MD08G1085500 Malus domestica
MD08G1085800 Malus domestica
MD10G1105600 Malus domestica
MD10G1151100 Malus domestica
MD15G1071000 Malus domestica
Medtr3g103090 Medicago truncatula
MELO3C016813.2 Cucumis melo
Migut.N01141 Erythranthe guttata
Migut.N02776 Erythranthe guttata
MSTRG.22223 Avicennia marina
MSTRG.24371 Avicennia marina
MSTRG.27763 Avicennia marina
Nitab4.5_0000068g0520 Nicotiana tabacum
Nitab4.5_0000164g0130 Nicotiana tabacum
Nitab4.5_0000569g0190 Nicotiana tabacum
Nitab4.5_0001298g0040 Nicotiana tabacum
Nitab4.5_0002314g0110 Nicotiana tabacum
Nitab4.5_0002968g0020 Nicotiana tabacum
Nitab4.5_0003803g0030 Nicotiana tabacum
Nitab4.5_0005301g0030 Nicotiana tabacum
Nn1g03720 Nelumbo nucifera
Nn1g04581 Nelumbo nucifera
Nn2g15136 Nelumbo nucifera
Nn5g30562 Nelumbo nucifera
Nn8g39787 Nelumbo nucifera
Oeu037279.1 Olea europaea
Oeu037500.1 Olea europaea
Oeu048578.1 Olea europaea
Os02g0219000 Oryza sativa ssp. japonica
Os02g0219050 Oryza sativa ssp. japonica
Os03g0448700 Oryza sativa ssp. japonica
Os07g0588000 Oryza sativa ssp. japonica
Os08g0491400 Oryza sativa ssp. japonica
Peaxi162Scf00003g04822 Petunia axillaris
Peaxi162Scf00017g02838 Petunia axillaris
Peaxi162Scf00081g01710 Petunia axillaris
Peaxi162Scf00102g01358 Petunia axillaris
Peaxi162Scf00179g00010 Petunia axillaris
Peaxi162Scf00179g00011 Petunia axillaris
Peaxi162Scf00267g00614 Petunia axillaris
PGR031G1293 Punica granatum
PGR120G0002 Punica granatum
PGR142G2399 Punica granatum
PGSC0003DMG400010671 Solanum tuberosum
PGSC0003DMG400011546 Solanum tuberosum
PGSC0003DMG400021507 Solanum tuberosum
Phvul.001G027600 Phaseolus vulgaris
Phvul.009G071500 Phaseolus vulgaris
Potri.002G119100 Populus trichocarpa
Potri.009G088700 Populus trichocarpa
Potri.014G016800 Populus trichocarpa
Pp3c11_19710 Physcomitrium patens
Pp3c20_9970 Physcomitrium patens
Pp3c23_4310 Physcomitrium patens
Prupe.1G423700 Prunus persica
Prupe.3G276000 Prunus persica
Prupe.8G144400 Prunus persica
Psat5g039040 Pisum sativum
PSO017G4718 Papaver somniferum
PSO170G0233 Papaver somniferum
PSO541G1264 Papaver somniferum
PSO675G0857 Papaver somniferum
PSO675G6693 Papaver somniferum
QL12p037925 Quercus lobata
RcHm_v2.0_Chr2g0094131 Rosa chinensis
RcHm_v2.0_Chr6g0253771 Rosa chinensis
RcHm_v2.0_Chr6g0309471 Rosa chinensis
Rhsim06G0061800 Rhododendron simsii
Rhsim11G0151300 Rhododendron simsii
Rhsim11G0151500 Rhododendron simsii
Rhsim11G0152900 Rhododendron simsii
Sabra02G0093600 Salix brachista
SalBow7G0136 Salvia bowleyana
Sc15g0003510 Simmondsia chinensis
Sed0019340 Sechium edule
SGA_v2.0_scaffold219G42529 Striga asiatica
SGA_v2.0_scaffold28G11825 Striga asiatica
SMO141G0038 Selaginella moellendorffii
SMO174G0013 Selaginella moellendorffii
SMO174G0098 Selaginella moellendorffii
SMO174G0244 Selaginella moellendorffii
SMO296G0017 Selaginella moellendorffii
SMO296G0027 Selaginella moellendorffii
SMO296G0038 Selaginella moellendorffii
SMO296G0039 Selaginella moellendorffii
SMO353G0413 Selaginella moellendorffii
Solyc01g106150.1 Solanum lycopersicum
Solyc04g077920.3 Solanum lycopersicum
Solyc12g088370.2 Solanum lycopersicum
Sopen00g013750 Solanum pennellii
Sopen01g048530 Solanum pennellii
Sopen04g031520 Solanum pennellii
Sopen12g030350 Solanum pennellii
Sp1g24010 Schrenkiella parvula
TAR376G0191 Trochodendron aralioides
TAR376G1139 Trochodendron aralioides
TAR381G1089 Trochodendron aralioides
TAR625G0071 Trochodendron aralioides
TAR628G0276 Trochodendron aralioides
TAR628G1204 Trochodendron aralioides
THA.LOC104814188 Tarenaya hassleriana
THA.LOC104820516 Tarenaya hassleriana
Thecc.02G114600 Theobroma cacao
Thecc.02G116500 Theobroma cacao
Thecc.08G089800 Theobroma cacao
Thhalv10001793m.g Eutrema salsugineum
Thhalv10007663m.g Eutrema salsugineum
Thhalv10009506m.g Eutrema salsugineum
Thhalv10017549m.g Eutrema salsugineum
Thhalv10017552m.g Eutrema salsugineum
Thhalv10017670m.g Eutrema salsugineum
TPR.G33694 Trifolium pratense
TWI12G0489 Tripterygium wilfordii
TWI14G0093 Tripterygium wilfordii
TWI56G0614 Tripterygium wilfordii
TWI74G1357 Tripterygium wilfordii
unitig_578.g16147 Utricularia gibba
unitig_8.g4879 Utricularia gibba
vmacro01963 Vaccinium macrocarpon
vmacro21437 Vaccinium macrocarpon
VMungo0540G1757 Vigna mungo
VMungo0647G0922 Vigna mungo
VMungo1309G1787 Vigna mungo
Zm00001eb020780 Zea mays
Zm00001eb108170 Zea mays
Zm00001eb326080 Zea mays

User provided reference genes

Program Settings