Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p14960 Brassica napus
A07p07530 Brassica napus
A07p07540 Brassica napus
A07p07550 Brassica napus
A07p20910 Brassica napus
A07p20920 Brassica napus
A07p20930 Brassica napus
A09p14790 Brassica napus
A09p14800 Brassica napus
Aa31LG9G340 Aethionema arabicum
Actinidia01396 Actinidia chinensis
Actinidia04211 Actinidia chinensis
Actinidia04212 Actinidia chinensis
Actinidia22719 Actinidia chinensis
Actinidia27334 Actinidia chinensis
Actinidia27335 Actinidia chinensis
Ah.07g197190 Amaranthus hybridus
Ah.12g052300 Amaranthus hybridus
Ah.12g052310 Amaranthus hybridus
AL2G10610 Arabidopsis lyrata
AL2G10620 Arabidopsis lyrata
AL7G47470 Arabidopsis lyrata
AL7G47480 Arabidopsis lyrata
Aqoxy5G04152 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.CM611Z Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.DN0YA4 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.F3VNHJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.P7UIV5 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Q3GPI2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.X2XLI1 Arachis hypogaea
AT1G64320 Arabidopsis thaliana
AT1G64330 Arabidopsis thaliana
AT5G41780 Arabidopsis thaliana
AT5G41790 Arabidopsis thaliana
Atru.chr9.2042 Acer truncatum
Atru.chr9.2043 Acer truncatum
AUR62010808 Chenopodium quinoa
AUR62010809 Chenopodium quinoa
AUR62019807 Chenopodium quinoa
AUR62019808 Chenopodium quinoa
BcaB02g07879 Brassica carinata
BcaB02g10228 Brassica carinata
BcaB06g27672 Brassica carinata
BcaB07g31454 Brassica carinata
BcaB07g31455 Brassica carinata
BcaC02g08917 Brassica carinata
BcaC02g11041 Brassica carinata
BcaC04g22558 Brassica carinata
BcaC04g22559 Brassica carinata
BcaC06g36642 Brassica carinata
BcaC07g37238 Brassica carinata
BcaC07g39281 Brassica carinata
BcaC08g44555 Brassica carinata
BcaC08g44556 Brassica carinata
BolC4t26499H Brassica oleracea
BolC4t26500H Brassica oleracea
BolC6t37201H Brassica oleracea
BolC6t37202H Brassica oleracea
BolC6t37203H Brassica oleracea
BolC7t40600H Brassica oleracea
BolC8t49926H Brassica oleracea
BolC9t54688H Brassica oleracea
BolC9t54689H Brassica oleracea
BraA03t09871Z Brassica rapa
BraA04t17139Z Brassica rapa
BraA07t28544Z Brassica rapa
BraA07t29778Z Brassica rapa
BraA09t37126Z Brassica rapa
C04p49150 Brassica napus
C06p20200 Brassica napus
C07p01920 Brassica napus
C08p22900 Brassica napus
C09p17910 Brassica napus
C09p17920 Brassica napus
CAN.G26.3 Capsicum annuum
CAN.G532.94 Capsicum annuum
CAN.G792.47 Capsicum annuum
CAN.G825.40 Capsicum annuum
CAN.G825.41 Capsicum annuum
CAN.G825.42 Capsicum annuum
CANSAT21G0822 Cannabis sativa
CANSAT21G2383 Cannabis sativa
CARHR046630 Cardamine hirsuta
CARHR046640 Cardamine hirsuta
CARHR212780 Cardamine hirsuta
CARHR212790 Cardamine hirsuta
Carub.0002s0048 Capsella rubella
Carub.0002s0049 Capsella rubella
Carub.0007s3359 Capsella rubella
Carub.0007s3360 Capsella rubella
Carub.0007s3367 Capsella rubella
Ca_17494_v3 Cicer arietinum L.
Ca_17495_v3 Cicer arietinum L.
Ca_17496_v3 Cicer arietinum L.
Ca_24520_v3 Cicer arietinum L.
Cc08_g15770 Coffea canephora
Cc08_g15780 Coffea canephora
CDE10G1355 Ceratophyllum demersum
Cfa012842 Carpinus fangiana
Ciclev10018618m.g Citrus clementina
Ciclev10024006m.g Citrus clementina
CiPaw.11G123900 Carya illinoinensis
CiPaw.12G085000 Carya illinoinensis
ClCG07G014890 Citrullus lanatus
COL.COLO4_21718 Corchorus olitorius
COL.COLO4_21719 Corchorus olitorius
Cpa.g.c43245 Carica papaya
Cpa.g.sc122.43 Carica papaya
Cpa.g.sc79.65 Carica papaya
CsaV3_4G006410 Cucumis sativus L.
CsaV3_4G006420 Cucumis sativus L.
CSS0006894 Camellia sinensis var. sinensis
CSS0015477 Camellia sinensis var. sinensis
CSS0018198 Camellia sinensis var. sinensis
CSS0027740 Camellia sinensis var. sinensis
CSS0045654 Camellia sinensis var. sinensis
CSS0047098 Camellia sinensis var. sinensis
DCAR_004171 Daucus carota
DCAR_005027 Daucus carota
Dinv37550 Davidia involucrata
Dinv37551 Davidia involucrata
Dinv38857 Davidia involucrata
Duzib068G0910 Durio zibethinus
Duzib068G1418 Durio zibethinus
Duzib084G0477 Durio zibethinus
Duzib084G0891 Durio zibethinus
Duzib205G0555 Durio zibethinus
Duzib205G1563 Durio zibethinus
ECA233G6022 Erigeron canadensis
ECA240G2507 Erigeron canadensis
ECA246G1519 Erigeron canadensis
EL10Ac5g12883 Beta vulgaris
EL10Ac5g12884 Beta vulgaris
Eucgr.E00844 Eucalyptus grandis
FAN04G1467 Fragaria x ananassa
FAN04G1700 Fragaria x ananassa
FAN04G3154 Fragaria x ananassa
FAN08G2643 Fragaria x ananassa
FAN08G2732 Fragaria x ananassa
FAN13G0971 Fragaria x ananassa
FAN18G1710 Fragaria x ananassa
FAN18G3989 Fragaria x ananassa
FAN18G4347 Fragaria x ananassa
FAN18G4528 Fragaria x ananassa
FvH4_5g04071 Fragaria vesca
FvH4_5g04072 Fragaria vesca
Glyma.05G215000 Glycine max
Glyma.05G215100 Glycine max
Glyma.08G021300 Glycine max
Glyma.08G021400 Glycine max
Gohir.A02G102200 Gossypium hirsutum
Gohir.A02G102300 Gossypium hirsutum
Gohir.A05G349350 Gossypium hirsutum
Gohir.A08G099784 Gossypium hirsutum
Gohir.A08G099826 Gossypium hirsutum
Gohir.A09G007350 Gossypium hirsutum
Gohir.A09G190800 Gossypium hirsutum
Gohir.A09G190850 Gossypium hirsutum
Gohir.D03G081800 Gossypium hirsutum
Gohir.D03G081900 Gossypium hirsutum
Gohir.D04G079828 Gossypium hirsutum
Gohir.D08G132401 Gossypium hirsutum
Gohir.D09G185400 Gossypium hirsutum
Gohir.D09G185425 Gossypium hirsutum
Gorai.003G081700 Gossypium raimondii
Gorai.003G081800 Gossypium raimondii
Gorai.004G135300 Gossypium raimondii
Gorai.004G135400 Gossypium raimondii
Gorai.006G207900 Gossypium raimondii
Gorai.006G208000 Gossypium raimondii
Gorai.008G186100 Gossypium raimondii
GSVIVG01019499001 Vitis vinifera
HanXRQChr02g0048241 Helianthus annuus
HanXRQChr03g0085141 Helianthus annuus
HanXRQChr10g0292651 Helianthus annuus
HanXRQChr17g0535111 Helianthus annuus
Haze_08667 Corylus avellana
Hma1.2p1_0952F.1_g240920 Hydrangea macrophylla
Hund11405 Selenicereus undatus
Lalb_Chr05g0224241 Lupinus albus
Lalb_Chr05g0224251 Lupinus albus
Lalb_Chr09g0332631 Lupinus albus
Lalb_Chr16g0376981 Lupinus albus
Lalb_Chr16g0390551 Lupinus albus
Lj4g0006933 Lotus japonicus
Lj4g0008940 Lotus japonicus
Lj8P210T83 Lonicera japonica
LjContig00312_ERROPOS870357g0010036 Lotus japonicus
Lsat_1_v5_gn_6_12040 Lactuca sativa
Lsat_1_v5_gn_6_85821 Lactuca sativa
Manes.01G045900 Manihot esculenta
Manes.01G046000 Manihot esculenta
Manes.02G012600 Manihot esculenta
Manes.10G064266 Manihot esculenta
MBI07_g09921_MAGBIO Magnolia biondii
MBI07_g09922_MAGBIO Magnolia biondii
MD06G1102200 Malus domestica
MD06G1102300 Malus domestica
MD14G1121400 Malus domestica
MD14G1121500 Malus domestica
Medtr8g090070 Medicago truncatula
Medtr8g099265 Medicago truncatula
Medtr8g099275 Medicago truncatula
Medtr8g099280 Medicago truncatula
Medtr8g099290 Medicago truncatula
MELO3C016308.2 Cucumis melo
MELO3C016309.2 Cucumis melo
Migut.A00678 Erythranthe guttata
Migut.A00679 Erythranthe guttata
Migut.E01235 Erythranthe guttata
Migut.E01236 Erythranthe guttata
Migut.N02095 Erythranthe guttata
MSTRG.11936 Avicennia marina
MSTRG.1816 Avicennia marina
MSTRG.25657 Avicennia marina
Nitab4.5_0000223g0210 Nicotiana tabacum
Nitab4.5_0002213g0050 Nicotiana tabacum
Nitab4.5_0002944g0210 Nicotiana tabacum
Nitab4.5_0004161g0030 Nicotiana tabacum
Nitab4.5_0005112g0010 Nicotiana tabacum
Nitab4.5_0006656g0010 Nicotiana tabacum
Oeu009945.1 Olea europaea
Oeu042385.1 Olea europaea
Oeu042386.1 Olea europaea
Oeu042387.1 Olea europaea
Oeu061086.1 Olea europaea
Oeu061087.1 Olea europaea
Peaxi162Scf00031g00242 Petunia axillaris
Peaxi162Scf00074g01134 Petunia axillaris
Peaxi162Scf00102g00176 Petunia axillaris
Peaxi162Scf00117g00131 Petunia axillaris
PGR042G1587 Punica granatum
PGSC0003DMG400004988 Solanum tuberosum
PGSC0003DMG400005787 Solanum tuberosum
PGSC0003DMG400012303 Solanum tuberosum
Phvul.002G163000 Phaseolus vulgaris
Phvul.002G296200 Phaseolus vulgaris
Phvul.002G296300 Phaseolus vulgaris
Potri.001G094200 Populus trichocarpa
Potri.001G094266 Populus trichocarpa
Potri.001G094332 Populus trichocarpa
Potri.003G137300 Populus trichocarpa
Potri.003G137400 Populus trichocarpa
Prupe.5G115200 Prunus persica
Prupe.5G115300 Prunus persica
Psat0s4440g0080 Pisum sativum
Psat7g027480 Pisum sativum
Psat7g027680 Pisum sativum
QL02p031434 Quercus lobata
QL02p031447 Quercus lobata
QL12p009828 Quercus lobata
QL12p010595 Quercus lobata
RcHm_v2.0_Chr7g0195431 Rosa chinensis
RcHm_v2.0_Chr7g0195441 Rosa chinensis
Rhsim02G0241100 Rhododendron simsii
Rhsim07G0084000 Rhododendron simsii
Sabra01G0070100 Salix brachista
Sabra01G0070200 Salix brachista
Sabra03G0098800 Salix brachista
Sabra03G0098900 Salix brachista
Sabra11G0006900 Salix brachista
SalBow1G3214 Salvia bowleyana
SalBow8G2059 Salvia bowleyana
SalBow8G3978 Salvia bowleyana
Sc01g0010120 Simmondsia chinensis
Sc07g0009950 Simmondsia chinensis
Sc07g0009960 Simmondsia chinensis
Sed0022097 Sechium edule
Sed0023438 Sechium edule
Sed0025225 Sechium edule
SGA_v2.0_scaffold111G31429 Striga asiatica
SGA_v2.0_scaffold144G35850 Striga asiatica
SGA_v2.0_scaffold173G39089 Striga asiatica
SGA_v2.0_scaffold96G28980 Striga asiatica
SHI07008 Sapria himalayana
Solyc08g008260.2 Solanum lycopersicum
Solyc08g082010.3 Solanum lycopersicum
Solyc12g056060.3 Solanum lycopersicum
Sopen08g004110 Solanum pennellii
Sopen08g030310 Solanum pennellii
Sopen12g028580 Solanum pennellii
Sp2g00430 Schrenkiella parvula
Sp2g00440 Schrenkiella parvula
Sp7g00300 Schrenkiella parvula
Sp7g00310 Schrenkiella parvula
TAR374G0015 Trochodendron aralioides
TAR374G0929 Trochodendron aralioides
TAR374G1003 Trochodendron aralioides
THA.LOC104809341 Tarenaya hassleriana
THA.LOC104809342 Tarenaya hassleriana
THA.LOC104823609 Tarenaya hassleriana
Thecc.03G293100 Theobroma cacao
Thecc.03G293200 Theobroma cacao
Thhalv10023387m.g Eutrema salsugineum
Thhalv10024082m.g Eutrema salsugineum
Thhalv10027620m.g Eutrema salsugineum
Thhalv10028203m.g Eutrema salsugineum
TPR.G24623 Trifolium pratense
TPR.G3374 Trifolium pratense
TPR.G3398 Trifolium pratense
TPR.G3412 Trifolium pratense
TPR.G3416 Trifolium pratense
TPR.G3450 Trifolium pratense
TPR.G6696 Trifolium pratense
TWI15G0725 Tripterygium wilfordii
TWI60G1278 Tripterygium wilfordii
unitig_52.g17439 Utricularia gibba
unitig_62.g23616 Utricularia gibba
unitig_748.g7418 Utricularia gibba
vmacro13912 Vaccinium macrocarpon
VMungo0251G1208 Vigna mungo
VMungo0251G1428 Vigna mungo
VMungo0251G1783 Vigna mungo
VMungo1215G3208 Vigna mungo

User provided reference genes

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