Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p21650 Brassica napus
A02p24640 Brassica napus
A03p31110 Brassica napus
A08p12020 Brassica napus
A09p01850 Brassica napus
A10p01480 Brassica napus
Aa31LG10G6230 Aethionema arabicum
Aa31LG1G9760 Aethionema arabicum
Aa31LG5G2020 Aethionema arabicum
Actinidia01491 Actinidia chinensis
Actinidia14332 Actinidia chinensis
Actinidia21040 Actinidia chinensis
Actinidia25133 Actinidia chinensis
Actinidia25806 Actinidia chinensis
Actinidia26754 Actinidia chinensis
Ah.08g213310 Amaranthus hybridus
Ah.15g093120 Amaranthus hybridus
AL1G12210 Arabidopsis lyrata
AL6G50740 Arabidopsis lyrata
AL7G39360 Arabidopsis lyrata
Aqoxy204s003 Aquilegia oxysepala
Aqoxy2G02929 Aquilegia oxysepala
Aqoxy5G00766 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.03QWZ4 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.06AKLM Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.1PU3AF Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FY9BZZ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GPZ84J Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.L9V8FT Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.V9JC55 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XU9PSJ Arachis hypogaea
AT1G02820 Arabidopsis thaliana
AT4G02380 Arabidopsis thaliana
AT4G15910 Arabidopsis thaliana
Atru.chr5.1130 Acer truncatum
Atru.chr6.1998 Acer truncatum
AUR62008681 Chenopodium quinoa
AUR62025562 Chenopodium quinoa
BcaB01g02052 Brassica carinata
BcaB01g02442 Brassica carinata
BcaB01g02443 Brassica carinata
BcaB03g15762 Brassica carinata
BcaB04g18338 Brassica carinata
BcaB05g23621 Brassica carinata
BcaC01g06763 Brassica carinata
BcaC01g06764 Brassica carinata
BcaC03g16117 Brassica carinata
BcaC05g24591 Brassica carinata
BcaC07g37937 Brassica carinata
BcaC09g50285 Brassica carinata
BcaNung00238 Brassica carinata
BcaNung04047 Brassica carinata
BolC1t02646H Brassica oleracea
BolC3t16079H Brassica oleracea
BolC5t28927H Brassica oleracea
BolC8t48322H Brassica oleracea
BolC9t53124H Brassica oleracea
BraA01t02072Z Brassica rapa
BraA03t12288Z Brassica rapa
BraA08t33194Z Brassica rapa
C01p26980 Brassica napus
C02p38880 Brassica napus
C03p37910 Brassica napus
C05p01450 Brassica napus
C09p01890 Brassica napus
CAN.G1280.4 Capsicum annuum
CAN.G1280.5 Capsicum annuum
CAN.G1989.1 Capsicum annuum
CAN.G1989.10 Capsicum annuum
CAN.G1989.9 Capsicum annuum
CAN.G472.12 Capsicum annuum
CARHR002140 Cardamine hirsuta
CARHR250570 Cardamine hirsuta
CARHR290450 Cardamine hirsuta
Carub.0001s0193 Capsella rubella
Carub.0006s3478 Capsella rubella
Carub.0007s2575 Capsella rubella
Ca_09179_v3 Cicer arietinum L.
Ca_10326_v3 Cicer arietinum L.
Ca_21486_v3 Cicer arietinum L.
Ca_30608_v3 Cicer arietinum L.
Cc01_g20970 Coffea canephora
CDE02G3647 Ceratophyllum demersum
CDE05G2669 Ceratophyllum demersum
CDE08G0317 Ceratophyllum demersum
CDE11G1042 Ceratophyllum demersum
Cfa005900 Carpinus fangiana
Ciclev10006308m.g Citrus clementina
Ciclev10023029m.g Citrus clementina
CiPaw.07G110400 Carya illinoinensis
CiPaw.08G094400 Carya illinoinensis
ClCG00G003750 Citrullus lanatus
ClCG09G005640 Citrullus lanatus
ClCG10G011020 Citrullus lanatus
ClCG10G011030 Citrullus lanatus
COL.COLO4_13835 Corchorus olitorius
COL.COLO4_23330 Corchorus olitorius
Cpa.g.sc16.192 Carica papaya
Cpa.g.sc9.251 Carica papaya
CsaV3_4G000870 Cucumis sativus L.
CsaV3_4G000880 Cucumis sativus L.
CsaV3_7G029330 Cucumis sativus L.
CSS0008385 Camellia sinensis var. sinensis
CSS0009418 Camellia sinensis var. sinensis
CSS0024122 Camellia sinensis var. sinensis
CSS0040472 Camellia sinensis var. sinensis
CSS0043962 Camellia sinensis var. sinensis
DCAR_005788 Daucus carota
DCAR_005789 Daucus carota
DCAR_018327 Daucus carota
Dinv19683 Davidia involucrata
Dinv29766 Davidia involucrata
Dinv44363 Davidia involucrata
Duzib133G1126 Durio zibethinus
Duzib138G0723 Durio zibethinus
Duzib151G0120 Durio zibethinus
Duzib211G0093 Durio zibethinus
ECA236G3158 Erigeron canadensis
ECA247G2585 Erigeron canadensis
ECA247G3724 Erigeron canadensis
EL10Ac7g17530 Beta vulgaris
Eucgr.H01103 Eucalyptus grandis
Eucgr.H01104 Eucalyptus grandis
Eucgr.H01105 Eucalyptus grandis
Eucgr.K03492 Eucalyptus grandis
FAN07G0698 Fragaria x ananassa
FAN12G0677 Fragaria x ananassa
FAN12G1374 Fragaria x ananassa
FAN15G0957 Fragaria x ananassa
FAN17G2928 Fragaria x ananassa
FAN20G0292 Fragaria x ananassa
FAN24G1387 Fragaria x ananassa
FAN27G2215 Fragaria x ananassa
FvH4_2g25860 Fragaria vesca
FvH4_4g18470 Fragaria vesca
Glyma.02G017100 Glycine max
Glyma.03G215000 Glycine max
Glyma.03G253200 Glycine max
Glyma.09G043400 Glycine max
Glyma.10G017600 Glycine max
Glyma.15G149600 Glycine max
Glyma.17G027400 Glycine max
Glyma.19G211600 Glycine max
Gohir.A08G042300 Gossypium hirsutum
Gohir.A08G076700 Gossypium hirsutum
Gohir.A08G076800 Gossypium hirsutum
Gohir.A08G117900 Gossypium hirsutum
Gohir.A10G165300 Gossypium hirsutum
Gohir.D08G052100 Gossypium hirsutum
Gohir.D08G086300 Gossypium hirsutum
Gohir.D08G086400 Gossypium hirsutum
Gohir.D08G138900 Gossypium hirsutum
Gohir.D10G171400 Gossypium hirsutum
Gorai.004G052200 Gossypium raimondii
Gorai.004G090700 Gossypium raimondii
Gorai.004G090800 Gossypium raimondii
Gorai.004G142600 Gossypium raimondii
Gorai.011G191500 Gossypium raimondii
GSVIVG01028033001 Vitis vinifera
HanXRQChr04g0114131 Helianthus annuus
HanXRQChr10g0284991 Helianthus annuus
HanXRQChr15g0465581 Helianthus annuus
HanXRQChr15g0465591 Helianthus annuus
HanXRQChr15g0465601 Helianthus annuus
HanXRQChr15g0465611 Helianthus annuus
Haze_04952 Corylus avellana
Hma1.2p1_0078F.1_g040440 Hydrangea macrophylla
Hma1.2p1_0494F.1_g165250 Hydrangea macrophylla
HPP92_000102 Vanilla planifolia
HPP92_025201 Vanilla planifolia
HPP92_025202 Vanilla planifolia
Hund05435 Selenicereus undatus
Hund18179 Selenicereus undatus
Lalb_Chr02g0146421 Lupinus albus
Lj1A23T85 Lonicera japonica
Lj1g0012830 Lotus japonicus
Lj4g0021541 Lotus japonicus
Lj5g0005721 Lotus japonicus
Lj6g0027178 Lotus japonicus
Lsat_1_v5_gn_8_164161 Lactuca sativa
Lsat_1_v5_gn_9_5400 Lactuca sativa
Lsat_1_v5_gn_9_5440 Lactuca sativa
Lsat_1_v5_gn_9_5460 Lactuca sativa
Manes.01G220400 Manihot esculenta
Manes.03G197100 Manihot esculenta
Manes.05G061300 Manihot esculenta
Manes.05G061400 Manihot esculenta
MBI18_g24872_MAGBIO Magnolia biondii
MBI18_g24873_MAGBIO Magnolia biondii
MBI19_g43555_MAGBIO Magnolia biondii
MBI19_g46347_MAGBIO Magnolia biondii
MD00G1127700 Malus domestica
MD03G1289900 Malus domestica
Medtr1g088230 Medicago truncatula
Medtr4g120040 Medicago truncatula
Medtr7g108735 Medicago truncatula
Medtr7g108745 Medicago truncatula
MELO3C015995.2 Cucumis melo
MELO3C017949.2 Cucumis melo
MELO3C017950.2 Cucumis melo
Migut.D00143 Erythranthe guttata
MSTRG.18144 Avicennia marina
MSTRG.3707 Avicennia marina
Nitab4.5_0000116g0500 Nicotiana tabacum
Nitab4.5_0001639g0070 Nicotiana tabacum
Nitab4.5_0001639g0100 Nicotiana tabacum
Nitab4.5_0002820g0100 Nicotiana tabacum
Nitab4.5_0004367g0080 Nicotiana tabacum
Nitab4.5_0005805g0050 Nicotiana tabacum
Nitab4.5_0007333g0010 Nicotiana tabacum
Nitab4.5_0010236g0020 Nicotiana tabacum
Nn3g21519 Nelumbo nucifera
Nn4g25778 Nelumbo nucifera
Oeu010665.1 Olea europaea
Oeu011462.1 Olea europaea
Oeu024406.1 Olea europaea
Oeu024408.1 Olea europaea
Oeu046672.1 Olea europaea
Oeu048333.1 Olea europaea
Os01g0314800 Oryza sativa ssp. japonica
Peaxi162Scf00001g00412 Petunia axillaris
Peaxi162Scf00140g01214 Petunia axillaris
Peaxi162Scf00399g00518 Petunia axillaris
Peaxi162Scf00445g00061 Petunia axillaris
Peaxi162Scf00445g00068 Petunia axillaris
PGR003G0004 Punica granatum
PGR003G0005 Punica granatum
PGR003G0016 Punica granatum
PGR031G1676 Punica granatum
PGR044G0049 Punica granatum
PGR044G0391 Punica granatum
PGR119G0329 Punica granatum
PGSC0003DMG400017936 Solanum tuberosum
PGSC0003DMG400031788 Solanum tuberosum
Phvul.001G207800 Phaseolus vulgaris
Phvul.001G207900 Phaseolus vulgaris
Phvul.003G096700 Phaseolus vulgaris
Phvul.006G107900 Phaseolus vulgaris
Phvul.007G218700 Phaseolus vulgaris
Phvul.009G249500 Phaseolus vulgaris
Potri.002G203500 Populus trichocarpa
Potri.010G012100 Populus trichocarpa
Potri.014G127700 Populus trichocarpa
Prupe.1G133500 Prunus persica
Prupe.8G263100 Prunus persica
Psat3g021600 Pisum sativum
Psat4g026680 Pisum sativum
Psat6g164600 Pisum sativum
PSO170G3454 Papaver somniferum
PSO170G4228 Papaver somniferum
PSO170G6491 Papaver somniferum
PSO407G0377 Papaver somniferum
PSO407G0418 Papaver somniferum
QL06p009975 Quercus lobata
QL12p028285 Quercus lobata
QL93p2007_0079 Quercus lobata
RcHm_v2.0_Chr4g0422961 Rosa chinensis
RcHm_v2.0_Chr6g0294191 Rosa chinensis
Rhsim01G0286200 Rhododendron simsii
Rhsim02G0007900 Rhododendron simsii
Rhsim13G0009300 Rhododendron simsii
Sabra02G0155900 Salix brachista
Sabra10G0007800 Salix brachista
SalBow1G8051 Salvia bowleyana
SalBow3G0131 Salvia bowleyana
Sc05g0003740 Simmondsia chinensis
Sed0003613 Sechium edule
Sed0008157 Sechium edule
Sed0009339 Sechium edule
SHI15052 Sapria himalayana
Solyc06g009140.3 Solanum lycopersicum
Solyc08g074720.2 Solanum lycopersicum
Solyc09g075210.3 Solanum lycopersicum
Sopen06g003900 Solanum pennellii
Sopen08g023330 Solanum pennellii
Sopen09g030030 Solanum pennellii
Sp1g01800 Schrenkiella parvula
Sp6g02260 Schrenkiella parvula
Sp7g14360 Schrenkiella parvula
TAR362G1222 Trochodendron aralioides
TAR365G0110 Trochodendron aralioides
TAR365G0147 Trochodendron aralioides
TAR365G0362 Trochodendron aralioides
TAR365G0861 Trochodendron aralioides
TAR365G1114 Trochodendron aralioides
TAR633G2750 Trochodendron aralioides
TAR636G0371 Trochodendron aralioides
THA.LOC104801278 Tarenaya hassleriana
THA.LOC104817485 Tarenaya hassleriana
THA.LOC104820291 Tarenaya hassleriana
Thecc.01G302000 Theobroma cacao
Thecc.04G287100 Theobroma cacao
Thhalv10001120m.g Eutrema salsugineum
Thhalv10009185m.g Eutrema salsugineum
Thhalv10026659m.g Eutrema salsugineum
Thhalv10029091m.g Eutrema salsugineum
TPR.G22147 Trifolium pratense
TPR.G25812 Trifolium pratense
TPR.G25814 Trifolium pratense
TPR.G3177 Trifolium pratense
TPR.G33959 Trifolium pratense
TPR.G39792 Trifolium pratense
TPR.G9639 Trifolium pratense
TWI09G0245 Tripterygium wilfordii
TWI14G1194 Tripterygium wilfordii
TWI23G0703 Tripterygium wilfordii
TWI59G1293 Tripterygium wilfordii
TWI73G0336 Tripterygium wilfordii
unitig_0.g670 Utricularia gibba
unitig_0.g671 Utricularia gibba
vmacro02442 Vaccinium macrocarpon
vmacro15151 Vaccinium macrocarpon
vmacro15221 Vaccinium macrocarpon
VMungo0720G0684 Vigna mungo
VMungo1215G3045 Vigna mungo
VMungo1383G1626 Vigna mungo
VMungo1383G1683 Vigna mungo
Zm00001eb130570 Zea mays
Zm00001eb130580 Zea mays

User provided reference genes

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