Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p25170 Brassica napus
A03p29420 Brassica napus
A04p18450 Brassica napus
A06p18870 Brassica napus
A07p34160 Brassica napus
A09p13610 Brassica napus
Aa31LG11G3080 Aethionema arabicum
Aa31LG4G17390 Aethionema arabicum
Actinidia32869 Actinidia chinensis
Actinidia34102 Actinidia chinensis
AL1G49540 Arabidopsis lyrata
AL5G28390 Arabidopsis lyrata
AL6G35000 Arabidopsis lyrata
AL6G46100 Arabidopsis lyrata
AL6G46110 Arabidopsis lyrata
AL6G46120 Arabidopsis lyrata
AL6G46130 Arabidopsis lyrata
AL6G46140 Arabidopsis lyrata
Aqoxy1G03849 Aquilegia oxysepala
Aqoxy1G03853 Aquilegia oxysepala
Aqoxy2G03119 Aquilegia oxysepala
Aqoxy3G02725 Aquilegia oxysepala
Aqoxy4G02483 Aquilegia oxysepala
Aqoxy4G02484 Aquilegia oxysepala
Aqoxy4G02486 Aquilegia oxysepala
Aqoxy4G02851 Aquilegia oxysepala
Aqoxy5G00772 Aquilegia oxysepala
Aqoxy5G03957 Aquilegia oxysepala
Aqoxy7G01052 Aquilegia oxysepala
Aqoxy7G01053 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.33M2C5 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.6H6H67 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.7PN750 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.B0P1NJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.BCS63D Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.BD57PC Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.DJ3X7X Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HTS5S3 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KCRD8X Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.R7U9VL Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UUWI9C Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Z3M8QU Arachis hypogaea
AT3G48880 Arabidopsis thaliana
AT4G11580 Arabidopsis thaliana
ATR1149G060 Amborella trichopoda
Atru.chr1.476 Acer truncatum
Atru.chr2.2845 Acer truncatum
Atru.chr2.2914 Acer truncatum
Atru.chr2.2937 Acer truncatum
BcaB01g00773 Brassica carinata
BcaB01g02684 Brassica carinata
BcaB01g02685 Brassica carinata
BcaB01g02687 Brassica carinata
BcaB01g02688 Brassica carinata
BcaB01g02689 Brassica carinata
BcaB01g02690 Brassica carinata
BcaB03g15180 Brassica carinata
BcaB05g22980 Brassica carinata
BcaC01g04415 Brassica carinata
BcaC01g04419 Brassica carinata
BcaC01g04625 Brassica carinata
BcaC02g08493 Brassica carinata
BcaC03g16340 Brassica carinata
BcaC07g39363 Brassica carinata
BcaC08g46173 Brassica carinata
BcaC09g49912 Brassica carinata
BcaNung03552 Brassica carinata
BcaNung03553 Brassica carinata
BNapus_Darmor_BZH_scaffold_129p00110 Brassica napus
BolC1t03074H Brassica oleracea
BolC1t05857H Brassica oleracea
BolC2t10180H Brassica oleracea
BolC3t15865H Brassica oleracea
BolC3t15866H Brassica oleracea
BolC3t16304H Brassica oleracea
BolC3t16308H Brassica oleracea
BolC4t26928H Brassica oleracea
BolC6t39178H Brassica oleracea
BolC8t50011H Brassica oleracea
BolC9t54527H Brassica oleracea
BolC9t54528H Brassica oleracea
BolC9t54529H Brassica oleracea
BolC9t54530H Brassica oleracea
BraA01t02425Z Brassica rapa
BraA01t04601Z Brassica rapa
BraA01t04602Z Brassica rapa
BraA03t12135Z Brassica rapa
BraA04t17457Z Brassica rapa
BraA06t24970Z Brassica rapa
BraA07t31041Z Brassica rapa
BraA07t31045Z Brassica rapa
BraA09t37014Z Brassica rapa
C01p31370 Brassica napus
C02p41640 Brassica napus
C03p35540 Brassica napus
C03p35550 Brassica napus
C03p35570 Brassica napus
C03p36150 Brassica napus
C03p40390 Brassica napus
C03p40430 Brassica napus
C04p53730 Brassica napus
C06p42610 Brassica napus
C08p23850 Brassica napus
C09p16180 Brassica napus
C09p16190 Brassica napus
C09p16200 Brassica napus
C09p16210 Brassica napus
C09p16250 Brassica napus
CAN.G1154.4 Capsicum annuum
CAN.G1704.4 Capsicum annuum
CAN.G913.3 Capsicum annuum
CARHR157690 Cardamine hirsuta
CARHR189810 Cardamine hirsuta
CARHR254820 Cardamine hirsuta
CARHR254830 Cardamine hirsuta
Carub.0003s0214 Capsella rubella
Carub.0005s1505 Capsella rubella
Carub.0006s3064 Capsella rubella
Carub.0006s3066 Capsella rubella
Carub.0006s3068 Capsella rubella
Carub.0006s3069 Capsella rubella
Ca_10779_v3 Cicer arietinum L.
Cc02_g03120 Coffea canephora
Cfa008309 Carpinus fangiana
Ciclev10005501m.g Citrus clementina
Ciclev10021301m.g Citrus clementina
CiPaw.03G105400 Carya illinoinensis
COL.COLO4_14296 Corchorus olitorius
COL.COLO4_16618 Corchorus olitorius
COL.COLO4_28668 Corchorus olitorius
COL.COLO4_36569 Corchorus olitorius
Cpa.g.sc107.40 Carica papaya
CSS0014052 Camellia sinensis var. sinensis
CSS0043009 Camellia sinensis var. sinensis
CSS0043143 Camellia sinensis var. sinensis
CSS0046422 Camellia sinensis var. sinensis
DCAR_009358 Daucus carota
Dinv28453 Davidia involucrata
Dinv35206 Davidia involucrata
Duzib205G0590 Durio zibethinus
ECA232G3548 Erigeron canadensis
ECA238G3926 Erigeron canadensis
Eucgr.A02798 Eucalyptus grandis
Eucgr.A02799 Eucalyptus grandis
FAN01G1848 Fragaria x ananassa
FAN03G0065 Fragaria x ananassa
FAN03G0454 Fragaria x ananassa
FAN03G0915 Fragaria x ananassa
FAN03G1381 Fragaria x ananassa
FAN03G1828 Fragaria x ananassa
FAN03G3408 Fragaria x ananassa
FAN06G1288 Fragaria x ananassa
FAN06G1718 Fragaria x ananassa
FAN10G2215 Fragaria x ananassa
FAN10G4305 Fragaria x ananassa
FAN18G0810 Fragaria x ananassa
FAN18G0967 Fragaria x ananassa
FvH4_3g32353 Fragaria vesca
FvH4_5g01901 Fragaria vesca
FvH4_5g01910 Fragaria vesca
FvH4_7g29321 Fragaria vesca
FvH4_7g29340 Fragaria vesca
FvH4_7g29350 Fragaria vesca
Glyma.01G100400 Glycine max
Glyma.02G057300 Glycine max
Glyma.10G236900 Glycine max
Glyma.15G192600 Glycine max
Glyma.16G140400 Glycine max
Glyma.20G157500 Glycine max
Gohir.A09G041000 Gossypium hirsutum
Gohir.D09G041900 Gossypium hirsutum
Gorai.006G048100 Gossypium raimondii
GSVIVG01010544001 Vitis vinifera
HanXRQChr07g0207061 Helianthus annuus
HanXRQChr15g0495581 Helianthus annuus
HanXRQChr15g0495591 Helianthus annuus
Haze_06779 Corylus avellana
Haze_13726 Corylus avellana
Hma1.2p1_2094F.1_g313920 Hydrangea macrophylla
Hma1.2p1_2482F.1_g323020 Hydrangea macrophylla
Hma1.2p1_3140F.1_g333050 Hydrangea macrophylla
HPP92_008435 Vanilla planifolia
HPP92_008440 Vanilla planifolia
HPP92_008441 Vanilla planifolia
HPP92_008461 Vanilla planifolia
HPP92_012377 Vanilla planifolia
Hund11495 Selenicereus undatus
Lalb_Chr06g0161071 Lupinus albus
Lj1g0005001 Lotus japonicus
Lj5g0027705 Lotus japonicus
Lj8A25T67 Lonicera japonica
Lsat_1_v5_gn_2_131821 Lactuca sativa
Manes.02G024600 Manihot esculenta
Manes.06G146400 Manihot esculenta
MBI18_g44743_MAGBIO Magnolia biondii
MBI18_g45107_MAGBIO Magnolia biondii
MD01G1199600 Malus domestica
MD06G1077200 Malus domestica
MD07G1267400 Malus domestica
MD07G1267500 Malus domestica
MD09G1056800 Malus domestica
MD09G1057300 Malus domestica
MD14G1098500 Malus domestica
Medtr0013s0100 Medicago truncatula
Medtr1g029330 Medicago truncatula
Medtr1g041650 Medicago truncatula
Medtr1g051505 Medicago truncatula
Medtr1g051645 Medicago truncatula
Medtr1g100697 Medicago truncatula
Medtr1g100707 Medicago truncatula
Medtr1g100713 Medicago truncatula
Medtr4g099030 Medicago truncatula
Medtr6g051445 Medicago truncatula
Medtr7g074410 Medicago truncatula
Medtr7g074430 Medicago truncatula
Medtr7g075970 Medicago truncatula
Migut.F01126 Erythranthe guttata
Nitab4.5_0000716g0180 Nicotiana tabacum
Nitab4.5_0003365g0050 Nicotiana tabacum
Nn1g01424 Nelumbo nucifera
Oeu021781.1 Olea europaea
Oeu035467.1 Olea europaea
Oeu061642.1 Olea europaea
Os10g0502900 Oryza sativa ssp. japonica
Peaxi162Scf00915g00025 Petunia axillaris
PGR042G3255 Punica granatum
PGSC0003DMG400014329 Solanum tuberosum
PGSC0003DMG400014362 Solanum tuberosum
PGSC0003DMG400016751 Solanum tuberosum
PGSC0003DMG400024052 Solanum tuberosum
PGSC0003DMG400030221 Solanum tuberosum
PGSC0003DMG400030222 Solanum tuberosum
PGSC0003DMG400030223 Solanum tuberosum
PGSC0003DMG400043692 Solanum tuberosum
PGSC0003DMG401014331 Solanum tuberosum
PGSC0003DMG401014333 Solanum tuberosum
PGSC0003DMG402014331 Solanum tuberosum
PGSC0003DMG402014333 Solanum tuberosum
PGSC0003DMG403014333 Solanum tuberosum
Phvul.007G069000 Phaseolus vulgaris
Phvul.008G073500 Phaseolus vulgaris
Phvul.008G073600 Phaseolus vulgaris
Potri.012G137700 Populus trichocarpa
Potri.015G139700 Populus trichocarpa
Prupe.2G293100 Prunus persica
Prupe.2G293200 Prunus persica
Psat3g113600 Pisum sativum
Psat3g113640 Pisum sativum
Psat6g199880 Pisum sativum
Psat7g237160 Pisum sativum
Psat7g237200 Pisum sativum
PSO063G0361 Papaver somniferum
PSO782G4919 Papaver somniferum
QL08p016914 Quercus lobata
QL08p017090 Quercus lobata
QL09p014520 Quercus lobata
QL09p041417 Quercus lobata
QL12p002854 Quercus lobata
RcHm_v2.0_Chr1g0377061 Rosa chinensis
RcHm_v2.0_Chr1g0377071 Rosa chinensis
RcHm_v2.0_Chr1g0377081 Rosa chinensis
RcHm_v2.0_Chr1g0377091 Rosa chinensis
RcHm_v2.0_Chr1g0377111 Rosa chinensis
RcHm_v2.0_Chr7g0198621 Rosa chinensis
RcHm_v2.0_Chr7g0198631 Rosa chinensis
Rhsim03G0179600 Rhododendron simsii
Sabra12G0103300 Salix brachista
Sabra15G0150400 Salix brachista
SalBow2G3420 Salvia bowleyana
SGA_v2.0_scaffold10G05344 Striga asiatica
Solyc01g015130.1 Solanum lycopersicum
Solyc01g015180.1 Solanum lycopersicum
Solyc01g016760.1 Solanum lycopersicum
Solyc01g017820.3 Solanum lycopersicum
Solyc01g150123.1 Solanum lycopersicum
Solyc03g025920.4 Solanum lycopersicum
Solyc03g025930.4 Solanum lycopersicum
Solyc03g025940.3 Solanum lycopersicum
Solyc03g026400.3 Solanum lycopersicum
Solyc03g026410.3 Solanum lycopersicum
Solyc03g062800.1 Solanum lycopersicum
Solyc03g062810.1 Solanum lycopersicum
Solyc03g096620.3 Solanum lycopersicum
Solyc06g009250.2 Solanum lycopersicum
Sopen03g004730 Solanum pennellii
Sopen03g004750 Solanum pennellii
Sopen03g004760 Solanum pennellii
Sopen03g026740 Solanum pennellii
Sp2g23500 Schrenkiella parvula
Sp5g13170 Schrenkiella parvula
Sp5g15070 Schrenkiella parvula
Sp6g05860 Schrenkiella parvula
SpUn0146_0030 Schrenkiella parvula
TAR627G0443 Trochodendron aralioides
TAR636G1697 Trochodendron aralioides
THA.LOC104806991 Tarenaya hassleriana
THA.LOC104814386 Tarenaya hassleriana
THA.LOC104814426 Tarenaya hassleriana
THA.LOC104824394 Tarenaya hassleriana
Thecc.03G175300 Theobroma cacao
Thecc.07G038400 Theobroma cacao
Thhalv10005418m.g Eutrema salsugineum
Thhalv10005421m.g Eutrema salsugineum
Thhalv10010519m.g Eutrema salsugineum
Thhalv10015508m.g Eutrema salsugineum
Thhalv10015605m.g Eutrema salsugineum
Thhalv10015761m.g Eutrema salsugineum
Thhalv10016006m.g Eutrema salsugineum
Thhalv10022247m.g Eutrema salsugineum
Thhalv10029451m.g Eutrema salsugineum
TPR.G14327 Trifolium pratense
TPR.G14336 Trifolium pratense
TPR.G14717 Trifolium pratense
TPR.G30186 Trifolium pratense
TPR.G34129 Trifolium pratense
TWI14G1216 Tripterygium wilfordii
vmacro06694 Vaccinium macrocarpon
VMungo0720G0161 Vigna mungo
VMungo1383G0932 Vigna mungo
Zm00001eb044180 Zea mays

User provided reference genes

Program Settings