Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p34880 Brassica napus
A04p14150 Brassica napus
A04p25800 Brassica napus
A05p12060 Brassica napus
A06p41640 Brassica napus
A07p20680 Brassica napus
Aa31LG2G5670 Aethionema arabicum
Aa31LG9G13420 Aethionema arabicum
Aa31LG9G810 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.2784 Anthoceros agrestis
Actinidia05872 Actinidia chinensis
Actinidia09614 Actinidia chinensis
Actinidia09615 Actinidia chinensis
Actinidia22134 Actinidia chinensis
Actinidia30607 Actinidia chinensis
Actinidia34013 Actinidia chinensis
Actinidia36234 Actinidia chinensis
Actinidia39787 Actinidia chinensis
Ah.02g131120 Amaranthus hybridus
Ah.03g135780 Amaranthus hybridus
Ah.03g148310 Amaranthus hybridus
AL4G29160 Arabidopsis lyrata
AL5G15890 Arabidopsis lyrata
AL7G48450 Arabidopsis lyrata
Aqoxy5G03222 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.23EZU0 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.84HJB8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MI9KMH Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NWPU6Y Arachis hypogaea
AT2G33490 Arabidopsis thaliana
AT3G26910 Arabidopsis thaliana
AT5G41100 Arabidopsis thaliana
ATR0582G334 Amborella trichopoda
ATR0706G182 Amborella trichopoda
Atru.chr11.2399 Acer truncatum
Atru.chr6.2620 Acer truncatum
Atru.chr6.2621 Acer truncatum
AUR62003389 Chenopodium quinoa
AUR62005690 Chenopodium quinoa
AUR62028869 Chenopodium quinoa
AUR62029438 Chenopodium quinoa
BcaB02g07908 Brassica carinata
BcaB02g10568 Brassica carinata
BcaB06g27599 Brassica carinata
BcaB06g28692 Brassica carinata
BcaB06g28693 Brassica carinata
BcaB07g30202 Brassica carinata
BcaC02g07798 Brassica carinata
BcaC02g11435 Brassica carinata
BcaC03g17403 Brassica carinata
BcaC06g31037 Brassica carinata
BcaC06g33877 Brassica carinata
BcaC08g44508 Brassica carinata
BolC2t11421H Brassica oleracea
BolC4t23130H Brassica oleracea
BolC4t26409H Brassica oleracea
BolC4t27779H Brassica oleracea
BolC6t37153H Brassica oleracea
BolC7t44115H Brassica oleracea
BraA02t08495Z Brassica rapa
BraA04t17076Z Brassica rapa
BraA04t18083Z Brassica rapa
BraA05t20146Z Brassica rapa
BraA06t27089Z Brassica rapa
BraA07t29759Z Brassica rapa
C02p53530 Brassica napus
C04p15620 Brassica napus
C04p48190 Brassica napus
C04p63020 Brassica napus
C06p19600 Brassica napus
C07p35980 Brassica napus
CAN.G1264.3 Capsicum annuum
CAN.G473.143 Capsicum annuum
CANSAT64G1900 Cannabis sativa
CANSAT88G0002 Cannabis sativa
CARHR127500 Cardamine hirsuta
CARHR148000 Cardamine hirsuta
CARHR213270 Cardamine hirsuta
Carub.0004s1512 Capsella rubella
Carub.0005s0500 Capsella rubella
Carub.0007s3439 Capsella rubella
Ca_03790_v3 Cicer arietinum L.
Ca_06518_v3 Cicer arietinum L.
Ca_08110_v3 Cicer arietinum L.
CBR_g21776 Chara braunii
Cc07_g01100 Coffea canephora
Cc11_g17490 Coffea canephora
CDE02G4628 Ceratophyllum demersum
CDE09G0493 Ceratophyllum demersum
Cfa007189 Carpinus fangiana
Ciclev10014551m.g Citrus clementina
Ciclev10030944m.g Citrus clementina
CiPaw.03G004200 Carya illinoinensis
CiPaw.04G002800 Carya illinoinensis
CiPaw.05G104400 Carya illinoinensis
CiPaw.06G107200 Carya illinoinensis
ClCG06G001840 Citrullus lanatus
COL.COLO4_13319 Corchorus olitorius
Cpa.g.sc70.101 Carica papaya
Cpa.g.sc70.102 Carica papaya
CsaV3_6G007890 Cucumis sativus L.
CSS0004611 Camellia sinensis var. sinensis
CSS0027537 Camellia sinensis var. sinensis
CSS0030710 Camellia sinensis var. sinensis
CSS0031320 Camellia sinensis var. sinensis
CSS0036991 Camellia sinensis var. sinensis
CSS0041667 Camellia sinensis var. sinensis
CSS0042506 Camellia sinensis var. sinensis
CSS0047940 Camellia sinensis var. sinensis
DCAR_014486 Daucus carota
DCAR_016628 Daucus carota
DCAR_024640 Daucus carota
Dinv25631 Davidia involucrata
Dinv31568 Davidia involucrata
Dinv33303 Davidia involucrata
Duzib147G0639 Durio zibethinus
Duzib187G1821 Durio zibethinus
Duzib248G1486 Durio zibethinus
Duzib251G0189 Durio zibethinus
Duzib264G0810 Durio zibethinus
ECA232G1155 Erigeron canadensis
ECA238G0778 Erigeron canadensis
ECA246G1413 Erigeron canadensis
ECA246G1694 Erigeron canadensis
EL10Ac6g13576 Beta vulgaris
EL10Ac6g15456 Beta vulgaris
Eucgr.B03540 Eucalyptus grandis
Eucgr.I01619 Eucalyptus grandis
FAN05G2484 Fragaria x ananassa
FAN07G2193 Fragaria x ananassa
FAN09G0806 Fragaria x ananassa
FAN12G1222 Fragaria x ananassa
FAN12G1813 Fragaria x ananassa
FAN14G0388 Fragaria x ananassa
FAN17G1569 Fragaria x ananassa
FvH4_4g23100 Fragaria vesca
FvH4_6g54020 Fragaria vesca
Glyma.02G294400 Glycine max
Glyma.10G298900 Glycine max
Glyma.16G051600 Glycine max
Glyma.18G301600 Glycine max
Glyma.19G097400 Glycine max
Glyma.20G250200 Glycine max
Gohir.A03G151000 Gossypium hirsutum
Gohir.A05G335300 Gossypium hirsutum
Gohir.A10G070700 Gossypium hirsutum
Gohir.A12G140600 Gossypium hirsutum
Gohir.D02G174000 Gossypium hirsutum
Gohir.D04G074100 Gossypium hirsutum
Gohir.D10G080500 Gossypium hirsutum
Gohir.D12G145200 Gossypium hirsutum
Gorai.005G195700 Gossypium raimondii
Gorai.008G156600 Gossypium raimondii
Gorai.011G087500 Gossypium raimondii
Gorai.012G083500 Gossypium raimondii
GSVIVG01000947001 Vitis vinifera
GSVIVG01033030001 Vitis vinifera
HanXRQChr09g0256411 Helianthus annuus
HanXRQChr11g0325821 Helianthus annuus
HanXRQChr12g0382801 Helianthus annuus
HanXRQChr14g0451281 Helianthus annuus
HanXRQChr15g0475821 Helianthus annuus
HanXRQChr17g0540511 Helianthus annuus
HanXRQChr17g0551581 Helianthus annuus
HanXRQChr17g0568781 Helianthus annuus
Haze_12474 Corylus avellana
Haze_14918 Corylus avellana
Hma1.2p1_0525F.1_g172680 Hydrangea macrophylla
HPP92_006985 Vanilla planifolia
HPP92_021627 Vanilla planifolia
HPP92_021685 Vanilla planifolia
HPP92_025289 Vanilla planifolia
Hund04253 Selenicereus undatus
Hund06121 Selenicereus undatus
Lalb_Chr02g0144741 Lupinus albus
Lalb_Chr04g0257111 Lupinus albus
Lalb_Chr21g0316831 Lupinus albus
Lalb_Chr22g0360141 Lupinus albus
Lj1g0007848 Lotus japonicus
Lj1g0010264 Lotus japonicus
Lj3A1075G32 Lonicera japonica
Lj6C834T6 Lonicera japonica
Lj7A614T42 Lonicera japonica
Lsat_1_v5_gn_0_11461 Lactuca sativa
Lsat_1_v5_gn_2_94660 Lactuca sativa
Lsat_1_v5_gn_4_2180 Lactuca sativa
Manes.04G090300 Manihot esculenta
Manes.08G103700 Manihot esculenta
Manes.09G185500 Manihot esculenta
Manes.11G079800 Manihot esculenta
Mapoly0033s0154 Marchantia polymorpha
MBI07_g24757_MAGBIO Magnolia biondii
MD09G1006200 Malus domestica
MD13G1125400 Malus domestica
MD16G1126200 Malus domestica
MD17G1010200 Malus domestica
Medtr7g005390 Medicago truncatula
Medtr7g083240 Medicago truncatula
MELO3C022344.2 Cucumis melo
Migut.F00030 Erythranthe guttata
Migut.K00988 Erythranthe guttata
Migut.K00990 Erythranthe guttata
Migut.K01480 Erythranthe guttata
MSTRG.24114 Avicennia marina
MSTRG.8038 Avicennia marina
MSTRG.9451 Avicennia marina
Nitab4.5_0000519g0180 Nicotiana tabacum
Nitab4.5_0001600g0140 Nicotiana tabacum
Nitab4.5_0002172g0050 Nicotiana tabacum
Nitab4.5_0003991g0010 Nicotiana tabacum
Nn4g22206 Nelumbo nucifera
Oeu012411.1 Olea europaea
Oeu020398.1 Olea europaea
Oeu035263.1 Olea europaea
Oeu044489.1 Olea europaea
Oeu045570.1 Olea europaea
Oeu058899.1 Olea europaea
Os02g0515200 Oryza sativa ssp. japonica
Os04g0394700 Oryza sativa ssp. japonica
Os09g0509300 Oryza sativa ssp. japonica
Peaxi162Scf00057g00131 Petunia axillaris
Peaxi162Scf00220g00091 Petunia axillaris
Peaxi162Scf00420g00729 Petunia axillaris
PGR102G0663 Punica granatum
PGR142G3486 Punica granatum
PGSC0003DMG400029999 Solanum tuberosum
PGSC0003DMG402020240 Solanum tuberosum
Phvul.001G088100 Phaseolus vulgaris
Phvul.007G000600 Phaseolus vulgaris
Phvul.008G000700 Phaseolus vulgaris
Potri.001G061500 Populus trichocarpa
Potri.001G324800 Populus trichocarpa
Potri.003G166300 Populus trichocarpa
Potri.017G063000 Populus trichocarpa
Pp3c11_24570 Physcomitrium patens
Pp3c7_960 Physcomitrium patens
Prupe.1G220000 Prunus persica
Prupe.3G310800 Prunus persica
Psat3g094760 Pisum sativum
Psat3g208240 Pisum sativum
PSO017G4397 Papaver somniferum
PSO339G1199 Papaver somniferum
PSO339G2684 Papaver somniferum
PSO339G4419 Papaver somniferum
PSO339G6452 Papaver somniferum
PSO384G1449 Papaver somniferum
PSO384G1491 Papaver somniferum
PSO384G3273 Papaver somniferum
PSO478G3609 Papaver somniferum
QL02p070438 Quercus lobata
QL03p050646 Quercus lobata
RcHm_v2.0_Chr2g0176201 Rosa chinensis
RcHm_v2.0_Chr4g0429401 Rosa chinensis
Rhsim10G0003100 Rhododendron simsii
Rhsim12G0020900 Rhododendron simsii
Rhsim12G0021400 Rhododendron simsii
Rhsim12G0021600 Rhododendron simsii
Sabra01G0044300 Salix brachista
Sabra03G0121700 Salix brachista
Sabra16G0207300 Salix brachista
Sabra17G0056800 Salix brachista
SalBow2G2781 Salvia bowleyana
SalBow6G3550 Salvia bowleyana
Sc03g0005890 Simmondsia chinensis
Sc11g0000230 Simmondsia chinensis
Sed0013366 Sechium edule
SEGI_06925 Sequoiadendron giganteum
SEGI_17916 Sequoiadendron giganteum
SEGI_18440 Sequoiadendron giganteum
SGA_v2.0_scaffold130G34300 Striga asiatica
SGA_v2.0_scaffold169G38716 Striga asiatica
SGA_v2.0_scaffold253G45166 Striga asiatica
SGA_v2.0_scaffold34G13695 Striga asiatica
SGA_v2.0_scaffold47G17621 Striga asiatica
SGA_v2.0_scaffold96G29021 Striga asiatica
SGA_v2.0_scaffold9G04794 Striga asiatica
SHI04021 Sapria himalayana
SHI04022 Sapria himalayana
SHI04023 Sapria himalayana
SMO169G0103 Selaginella moellendorffii
Solyc01g009820.4 Solanum lycopersicum
Solyc02g094410.4 Solanum lycopersicum
Sopen01g005350 Solanum pennellii
Sopen02g039060 Solanum pennellii
Sp2g16030 Schrenkiella parvula
Sp4g15830 Schrenkiella parvula
Sp7g00800 Schrenkiella parvula
TAR374G0120 Trochodendron aralioides
TAR374G0763 Trochodendron aralioides
TAR622G0696 Trochodendron aralioides
TAR629G0780 Trochodendron aralioides
THA.LOC104812599 Tarenaya hassleriana
THA.LOC104820529 Tarenaya hassleriana
THA.LOC104823990 Tarenaya hassleriana
THA.LOC104825645 Tarenaya hassleriana
Thecc.02G197400 Theobroma cacao
Thecc.04G042900 Theobroma cacao
Thhalv10003842m.g Eutrema salsugineum
Thhalv10016385m.g Eutrema salsugineum
Thhalv10027730m.g Eutrema salsugineum
TPR.G15640 Trifolium pratense
TPR.G21124 Trifolium pratense
TWI32G1140 Tripterygium wilfordii
TWI60G0559 Tripterygium wilfordii
TWI75G0284 Tripterygium wilfordii
unitig_22.g6952 Utricularia gibba
unitig_747.g21117 Utricularia gibba
unitig_748.g8695 Utricularia gibba
unitig_88.g27785 Utricularia gibba
vmacro01033 Vaccinium macrocarpon
vmacro05984 Vaccinium macrocarpon
vmacro22629 Vaccinium macrocarpon
VMungo0720G2522 Vigna mungo
VMungo1383G2564 Vigna mungo
VMungo1383G3008 Vigna mungo
Zm00001eb102560 Zea mays
Zm00001eb180810 Zea mays
Zm00001eb241900 Zea mays
Zm00001eb317920 Zea mays
Zm00001eb421310 Zea mays

User provided reference genes

Program Settings