Gene: AT5G41100

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G41100
  • Transcript Identifier AT5G41100.2
  • Gene Type Coding gene
  • Location Chr5 : 16447429-16450686 : positive

Gene Family Information

  • ID HOM05D002076
  • #Genes/#Species 320/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G41100.2
  • uniprot A4FVS2

Descriptions

  • Description hydroxyproline-rich glycoprotein family protein
  • Computational description FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT3G26910.2); Has 1503 Blast hits to 1197 proteins in 220 species: Archae - 4; Bacteria - 108; Metazoa - 481; Fungi - 318; Plants - 186; Viruses - 39; Other Eukaryotes - 367 (source: NCBI BLink).
  • Computational description FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT3G26910.2); Has 1497 Blast hits to 1191 proteins in 214 species: Archae - 4; Bacteria - 102; Metazoa - 485; Fungi - 316; Plants - 187; Viruses - 37; Other Eukaryotes - 366 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008150
ND
Gene Ontologybiological_process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003674
ND
Gene Ontologymolecular_function

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
ISM
Gene Ontologycytoplasm
GO:0005886
IDA
GOA Databaseplasma membrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR027267 AH/BAR domain superfamily
IPR037488 Uncharacterized protein At2g33490-like
Mapman id Description
35.1 not assigned.annotated