Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p26340 Brassica napus
A03p29300 Brassica napus
A05p39240 Brassica napus
A05p39300 Brassica napus
A06p13140 Brassica napus
A08p31030 Brassica napus
Aa31LG4G2620 Aethionema arabicum
Aa31LG7G2030 Aethionema arabicum
Aa31LG9G11010 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_340.235 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.5461 Anthoceros agrestis
Actinidia07331 Actinidia chinensis
Actinidia12334 Actinidia chinensis
Actinidia18813 Actinidia chinensis
Actinidia18814 Actinidia chinensis
Actinidia20593 Actinidia chinensis
Actinidia26698 Actinidia chinensis
Actinidia35185 Actinidia chinensis
Ah.04g163360 Amaranthus hybridus
AL1G29460 Arabidopsis lyrata
AL6G45350 Arabidopsis lyrata
Aqoxy1G01663 Aquilegia oxysepala
Aqoxy7G01542 Aquilegia oxysepala
Aqoxy84s008 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.4T2FL2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.6G4FCY Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HGAE8N Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JQUJ9N Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NNXL48 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PV2JBQ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.T9IDSP Arachis hypogaea
AT1G17220 Arabidopsis thaliana
AT4G11160 Arabidopsis thaliana
ATR0733G058 Amborella trichopoda
ATR1098G041 Amborella trichopoda
Atru.chr2.1845 Acer truncatum
AUR62015765 Chenopodium quinoa
AUR62020448 Chenopodium quinoa
AUR62041255 Chenopodium quinoa
AUR62041928 Chenopodium quinoa
BcaB01g02708 Brassica carinata
BcaB03g13012 Brassica carinata
BcaB05g23856 Brassica carinata
BcaB07g34040 Brassica carinata
BcaC01g04636 Brassica carinata
BcaC03g16365 Brassica carinata
BcaC05g25655 Brassica carinata
BcaC07g38837 Brassica carinata
BolC2t10219H Brassica oleracea
BolC3t15852H Brassica oleracea
BolC5t30271H Brassica oleracea
BolC8t49403H Brassica oleracea
BraA02t07636Z Brassica rapa
BraA03t12126Z Brassica rapa
BraA06t24472Z Brassica rapa
BraA08t35032Z Brassica rapa
C02p41880 Brassica napus
C03p35390 Brassica napus
C05p15640 Brassica napus
C08p17770 Brassica napus
CAN.G532.55 Capsicum annuum
CAN.G585.3 Capsicum annuum
CANSAT21G0572 Cannabis sativa
CANSAT56G3161 Cannabis sativa
CARHR017800 Cardamine hirsuta
CARHR017810 Cardamine hirsuta
CARHR255410 Cardamine hirsuta
Carub.0001s1697 Capsella rubella
Carub.0006s2999 Capsella rubella
Ca_03484_v3 Cicer arietinum L.
Ca_13861_v3 Cicer arietinum L.
Ca_21034_v3 Cicer arietinum L.
Ca_22709_v3 Cicer arietinum L.
CBR_g12031 Chara braunii
CBR_g39246 Chara braunii
Cc00_g05740 Coffea canephora
Cc00_g06660 Coffea canephora
Cc00_g16100 Coffea canephora
Cc00_g18710 Coffea canephora
Cc02_g36300 Coffea canephora
Cc05_g04260 Coffea canephora
Cc05_g10020 Coffea canephora
Cc07_g20450 Coffea canephora
Cc08_g06140 Coffea canephora
Cc08_g06280 Coffea canephora
Cc08_g15620 Coffea canephora
Cc10_g09640 Coffea canephora
Cc10_g12340 Coffea canephora
Cc11_g03740 Coffea canephora
Cc11_g06070 Coffea canephora
CDE01G0811 Ceratophyllum demersum
CDE03G0137 Ceratophyllum demersum
CDE06G2115 Ceratophyllum demersum
Cfa019443 Carpinus fangiana
Ciclev10000440m.g Citrus clementina
Ciclev10018663m.g Citrus clementina
Ciclev10029678m.g Citrus clementina
CiPaw.11G125500 Carya illinoinensis
CiPaw.12G007300 Carya illinoinensis
CiPaw.12G086300 Carya illinoinensis
ClCG07G014810 Citrullus lanatus
ClCG11G016260 Citrullus lanatus
COL.COLO4_21733 Corchorus olitorius
COL.COLO4_38376 Corchorus olitorius
COL.COLO4_38377 Corchorus olitorius
Cpa.g.sc1603.1 Carica papaya
Cpa.g.sc229.4 Carica papaya
Cre07.g341850 Chlamydomonas reinhardtii
Cre08.g376800 Chlamydomonas reinhardtii
CsaV3_4G006340 Cucumis sativus L.
CsaV3_4G037970 Cucumis sativus L.
CsaV3_4G037980 Cucumis sativus L.
CSS0015742 Camellia sinensis var. sinensis
CSS0022416 Camellia sinensis var. sinensis
CSS0037066 Camellia sinensis var. sinensis
CSS0037709 Camellia sinensis var. sinensis
DCAR_008535 Daucus carota
DCAR_013807 Daucus carota
DCAR_017559 Daucus carota
Dinv05077 Davidia involucrata
Dinv21344 Davidia involucrata
Dinv26637 Davidia involucrata
Dinv38874 Davidia involucrata
Duzib068G0029 Durio zibethinus
Duzib213G0092 Durio zibethinus
ECA233G2686 Erigeron canadensis
ECA236G1750 Erigeron canadensis
EL10Ac4g07824 Beta vulgaris
EL10Ac4g08531 Beta vulgaris
Eucgr.B03733 Eucalyptus grandis
Eucgr.D01778 Eucalyptus grandis
Eucgr.F01432 Eucalyptus grandis
Eucgr.F01437 Eucalyptus grandis
FAN04G2466 Fragaria x ananassa
FAN04G3218 Fragaria x ananassa
FAN08G0699 Fragaria x ananassa
FAN08G1901 Fragaria x ananassa
FAN08G2579 Fragaria x ananassa
FAN09G0752 Fragaria x ananassa
FAN09G4762 Fragaria x ananassa
FAN11G0136 Fragaria x ananassa
FAN13G0607 Fragaria x ananassa
FAN13G1744 Fragaria x ananassa
FAN13G2640 Fragaria x ananassa
FAN14G3870 Fragaria x ananassa
FAN16G0016 Fragaria x ananassa
FAN18G3253 Fragaria x ananassa
FAN18G4425 Fragaria x ananassa
FAN21G3742 Fragaria x ananassa
FAN25G2027 Fragaria x ananassa
FAN25G2515 Fragaria x ananassa
FAN25G3625 Fragaria x ananassa
FvH4_3g16100 Fragaria vesca
FvH4_4g11541 Fragaria vesca
FvH4_5g03810 Fragaria vesca
FvH4_5g26110 Fragaria vesca
Glyma.03G227100 Glycine max
Glyma.08G174200 Glycine max
Glyma.15G253000 Glycine max
Glyma.19G224000 Glycine max
Gohir.A01G095300 Gossypium hirsutum
Gohir.A12G231600 Gossypium hirsutum
Gohir.D01G079500 Gossypium hirsutum
Gohir.D04G140701 Gossypium hirsutum
Gohir.D12G235475 Gossypium hirsutum
Gorai.002G104300 Gossypium raimondii
Gorai.004G054000 Gossypium raimondii
Gorai.008G251900 Gossypium raimondii
Gorai.009G336800 Gossypium raimondii
GSVIVG01020495001 Vitis vinifera
GSVIVG01031142001 Vitis vinifera
HanXRQChr04g0099791 Helianthus annuus
HanXRQChr07g0188771 Helianthus annuus
HanXRQChr11g0330011 Helianthus annuus
HanXRQChr13g0393351 Helianthus annuus
HanXRQChr15g0492361 Helianthus annuus
HanXRQChr17g0553311 Helianthus annuus
Haze_08514 Corylus avellana
Haze_08696 Corylus avellana
HPP92_011058 Vanilla planifolia
HPP92_016575 Vanilla planifolia
HPP92_017626 Vanilla planifolia
Hund01994 Selenicereus undatus
Hund02299 Selenicereus undatus
Lalb_Chr01g0015981 Lupinus albus
Lalb_Chr16g0385451 Lupinus albus
Lalb_Chr25g0285241 Lupinus albus
Lj1A805T79 Lonicera japonica
Lj1g0008760 Lotus japonicus
Lj3g0011562 Lotus japonicus
Lj8A212T64 Lonicera japonica
Lsat_1_v5_gn_5_123200 Lactuca sativa
Lsat_1_v5_gn_6_11741 Lactuca sativa
Lsat_1_v5_gn_7_99460 Lactuca sativa
Manes.01G048100 Manihot esculenta
Manes.02G013600 Manihot esculenta
Manes.03G090800 Manihot esculenta
Manes.15G101300 Manihot esculenta
Mapoly0002s0117 Marchantia polymorpha
Mapoly0085s0042 Marchantia polymorpha
MBI02_g12197_MAGBIO Magnolia biondii
MBI16_g36972_MAGBIO Magnolia biondii
MCO07G750 Micromonas commoda
MCO10G395 Micromonas commoda
MD05G1213700 Malus domestica
MD06G1099300 Malus domestica
MD10G1197600 Malus domestica
MD12G1000300 Malus domestica
MD14G1119100 Malus domestica
Medtr2g064840 Medicago truncatula
Medtr5g029870 Medicago truncatula
Medtr5g032140 Medicago truncatula
MELO3C010552.2 Cucumis melo
MELO3C016316.2 Cucumis melo
Migut.H02058 Erythranthe guttata
Migut.M00670 Erythranthe guttata
Migut.N02466 Erythranthe guttata
MSTRG.12855 Avicennia marina
MSTRG.14998 Avicennia marina
MSTRG.17692 Avicennia marina
Nitab4.5_0000223g0060 Nicotiana tabacum
Nitab4.5_0001612g0100 Nicotiana tabacum
Nitab4.5_0002564g0040 Nicotiana tabacum
Nitab4.5_0004166g0050 Nicotiana tabacum
Nn1g02857 Nelumbo nucifera
Nn3g20354 Nelumbo nucifera
Nn4g26631 Nelumbo nucifera
Oeu012709.1 Olea europaea
Os05g0575300 Oryza sativa ssp. japonica
Os09g0515500 Oryza sativa ssp. japonica
Peaxi162Scf00074g01326 Petunia axillaris
Peaxi162Scf00111g00527 Petunia axillaris
PGR031G0914 Punica granatum
PGR042G2447 Punica granatum
PGSC0003DMG400012166 Solanum tuberosum
PGSC0003DMG400031088 Solanum tuberosum
Phvul.001G220900 Phaseolus vulgaris
Phvul.005G054600 Phaseolus vulgaris
Potri.001G095500 Populus trichocarpa
Potri.001G436300 Populus trichocarpa
Potri.011G140100 Populus trichocarpa
Pp3c16_7670 Physcomitrium patens
Pp3c1_24000 Physcomitrium patens
Pp3c2_10860 Physcomitrium patens
Pp3c5_28950 Physcomitrium patens
Pp3c6_1920 Physcomitrium patens
PRCOL_00004967 Prasinoderma coloniale
PRCOL_00006938 Prasinoderma coloniale
PRCOL_00006939 Prasinoderma coloniale
Prupe.4G144300 Prunus persica
Prupe.5G113200 Prunus persica
Psat1g009920 Pisum sativum
Psat2g083720 Pisum sativum
PSO135G0409 Papaver somniferum
PSO384G2610 Papaver somniferum
PSO532G0081 Papaver somniferum
PSO541G0296 Papaver somniferum
PSO675G7806 Papaver somniferum
QL02p031758 Quercus lobata
QL04p073059 Quercus lobata
QL04p073107 Quercus lobata
RcHm_v2.0_Chr1g0329761 Rosa chinensis
RcHm_v2.0_Chr5g0027081 Rosa chinensis
RcHm_v2.0_Chr7g0195701 Rosa chinensis
Rhsim01G0060100 Rhododendron simsii
Rhsim04G0032300 Rhododendron simsii
Rhsim06G0183300 Rhododendron simsii
Sabra01G0071200 Salix brachista
Sabra11G0126200 Salix brachista
Sabra16G0290500 Salix brachista
Sabra16G0291600 Salix brachista
Sabra16G0292200 Salix brachista
Sabra16G0294800 Salix brachista
Sabra16G0295600 Salix brachista
Sabra19G0135800 Salix brachista
SalBow7G1447 Salvia bowleyana
SalBow7G1750 Salvia bowleyana
SalBow7G2823 Salvia bowleyana
SalBow8G4653 Salvia bowleyana
Sc16g0001710 Simmondsia chinensis
Sc16g0003460 Simmondsia chinensis
Sed0013452 Sechium edule
Sed0022859 Sechium edule
Sed0025340 Sechium edule
SEGI_10904 Sequoiadendron giganteum
SEGI_17195 Sequoiadendron giganteum
SEGI_17904 Sequoiadendron giganteum
SGA_v2.0_scaffold295G47498 Striga asiatica
SGA_v2.0_scaffold73G24366 Striga asiatica
SMO147G0028 Selaginella moellendorffii
SMO147G0248 Selaginella moellendorffii
SMO250G0004 Selaginella moellendorffii
Solyc07g056020.3 Solanum lycopersicum
Solyc08g081900.4 Solanum lycopersicum
Sopen07g029370 Solanum pennellii
Sopen08g030190 Solanum pennellii
Sp1g15360 Schrenkiella parvula
Sp6g06250 Schrenkiella parvula
TAR374G0371 Trochodendron aralioides
TAR624G1050 Trochodendron aralioides
TAR636G1001 Trochodendron aralioides
THA.LOC104812285 Tarenaya hassleriana
THA.LOC104813032 Tarenaya hassleriana
Thecc.02G087800 Theobroma cacao
Thecc.03G291400 Theobroma cacao
Thecc.05G113000 Theobroma cacao
Thecc.07G159700 Theobroma cacao
Thhalv10006681m.g Eutrema salsugineum
Thhalv10028461m.g Eutrema salsugineum
TPR.G27161 Trifolium pratense
TPR.G29977 Trifolium pratense
TPR.G33212 Trifolium pratense
TWI38G0655 Tripterygium wilfordii
TWI38G0855 Tripterygium wilfordii
TWI38G1341 Tripterygium wilfordii
unitig_22.g5671 Utricularia gibba
unitig_747.g21595 Utricularia gibba
vmacro07734 Vaccinium macrocarpon
vmacro09449 Vaccinium macrocarpon
vmacro12030 Vaccinium macrocarpon
VMungo1080G0437 Vigna mungo
VMungo1383G2561 Vigna mungo
Zm00001eb081790 Zea mays
Zm00001eb250510 Zea mays
Zm00001eb286620 Zea mays
Zm00001eb286640 Zea mays

User provided reference genes

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