Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p19250 Brassica napus
A03p24780 Brassica napus
A04p01870 Brassica napus
A04p33270 Brassica napus
Aa31LG10G14260 Aethionema arabicum
Aa31LG1G25930 Aethionema arabicum
Aa31LG8G15420 Aethionema arabicum
Aa31LG9G2740 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.1175 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.5639 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.3341 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.2374 Anthoceros agrestis
Actinidia05844 Actinidia chinensis
Actinidia05845 Actinidia chinensis
Actinidia06954 Actinidia chinensis
Actinidia15851 Actinidia chinensis
Actinidia21583 Actinidia chinensis
Ah.04g162000 Amaranthus hybridus
AL4G43330 Arabidopsis lyrata
AL5G42300 Arabidopsis lyrata
AL7G41540 Arabidopsis lyrata
Aqoxy1G00344 Aquilegia oxysepala
Aqoxy2G00078 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.59T0PU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.DSBP33 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.G6N61A Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PFQ45M Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.X24NYN Arachis hypogaea
AT2G11270 Arabidopsis thaliana
AT2G44350 Arabidopsis thaliana
AT3G60100 Arabidopsis thaliana
AT4G14590 Arabidopsis thaliana
ATR0006G067 Amborella trichopoda
ATR0626G052 Amborella trichopoda
ATR0626G287 Amborella trichopoda
ATR0626G367 Amborella trichopoda
ATR0693G336 Amborella trichopoda
Atru.chr1.1335 Acer truncatum
Atru.chr1.1605 Acer truncatum
Atru.chr11.2703 Acer truncatum
Atru.chr3.2803 Acer truncatum
AUR62000179 Chenopodium quinoa
AUR62011552 Chenopodium quinoa
AUR62016372 Chenopodium quinoa
AUR62039829 Chenopodium quinoa
BcaB01g03317 Brassica carinata
BcaB02g08193 Brassica carinata
BcaB06g29369 Brassica carinata
BcaC01g00821 Brassica carinata
BcaC01g05172 Brassica carinata
BcaC01g05780 Brassica carinata
BcaC01g05781 Brassica carinata
BcaC02g10111 Brassica carinata
BcaC08g44279 Brassica carinata
BolC3t14628H Brassica oleracea
BolC3t15304H Brassica oleracea
BolC3t20763H Brassica oleracea
BolC4t24830H Brassica oleracea
BolC4t28600H Brassica oleracea
BolC6t36898H Brassica oleracea
BraA03t11180Z Brassica rapa
BraA03t11685Z Brassica rapa
BraA04t15910Z Brassica rapa
BraA04t18788Z Brassica rapa
BraA09t42224Z Brassica rapa
C03p22450 Brassica napus
C03p29550 Brassica napus
C03p84750 Brassica napus
C04p32630 Brassica napus
C04p70970 Brassica napus
C06p16980 Brassica napus
CAN.G129.46 Capsicum annuum
CAN.G993.31 Capsicum annuum
CANSAT11G1376 Cannabis sativa
CANSAT25G2826 Cannabis sativa
CARHR139510 Cardamine hirsuta
CARHR170410 Cardamine hirsuta
CARHR220820 Cardamine hirsuta
Carub.0004s2693 Capsella rubella
Carub.0005s2683 Capsella rubella
Carub.0007s2761 Capsella rubella
Ca_02885_v3 Cicer arietinum L.
Ca_02887_v3 Cicer arietinum L.
Ca_21049_v3 Cicer arietinum L.
CBR_g11008 Chara braunii
CBR_g18996 Chara braunii
Cc01_g00100 Coffea canephora
Cc02_g26940 Coffea canephora
Cc04_g16190 Coffea canephora
CDE02G3397 Ceratophyllum demersum
CDE06G0987 Ceratophyllum demersum
CDE06G2277 Ceratophyllum demersum
CDE06G2691 Ceratophyllum demersum
CDE07G1107 Ceratophyllum demersum
Cfa010689 Carpinus fangiana
Cfa010958 Carpinus fangiana
Cfa019819 Carpinus fangiana
Cfa026498 Carpinus fangiana
Cfa027058 Carpinus fangiana
Ciclev10018312m.g Citrus clementina
Ciclev10031423m.g Citrus clementina
CiPaw.06G055000 Carya illinoinensis
CiPaw.16G066900 Carya illinoinensis
ClCG03G012710 Citrullus lanatus
ClCG09G003730 Citrullus lanatus
COL.COLO4_19604 Corchorus olitorius
COL.COLO4_26822 Corchorus olitorius
COL.COLO4_33273 Corchorus olitorius
Cpa.g.sc189.5 Carica papaya
Cpa.g.sc529.1 Carica papaya
Cre12.g514750 Chlamydomonas reinhardtii
CsaV3_1G043250 Cucumis sativus L.
CsaV3_7G031480 Cucumis sativus L.
CSS0004924 Camellia sinensis var. sinensis
CSS0011008 Camellia sinensis var. sinensis
CSS0014563 Camellia sinensis var. sinensis
CSS0014605 Camellia sinensis var. sinensis
CSS0020062 Camellia sinensis var. sinensis
CSS0026005 Camellia sinensis var. sinensis
DCAR_029593 Daucus carota
DCAR_031630 Daucus carota
DCAR_031631 Daucus carota
Dinv05065 Davidia involucrata
Dinv43498 Davidia involucrata
Dinv43938 Davidia involucrata
Duzib168G0303 Durio zibethinus
Duzib168G1726 Durio zibethinus
ECA234G1190 Erigeron canadensis
ECA248G2873 Erigeron canadensis
ECA248G2977 Erigeron canadensis
EL10Ac4g10124 Beta vulgaris
EL10Ac4g10126 Beta vulgaris
EL10Ac4g10162 Beta vulgaris
EL10Ac4g10165 Beta vulgaris
EL10Ac9g21933 Beta vulgaris
Eucgr.B03727 Eucalyptus grandis
Eucgr.G03412 Eucalyptus grandis
FAN01G0191 Fragaria x ananassa
FAN01G3098 Fragaria x ananassa
FAN03G0965 Fragaria x ananassa
FAN06G3891 Fragaria x ananassa
FAN06G4832 Fragaria x ananassa
FAN10G1580 Fragaria x ananassa
FAN21G2573 Fragaria x ananassa
FvH4_3g28960 Fragaria vesca
FvH4_7g00080 Fragaria vesca
Glyma.08G157700 Glycine max
Glyma.10G199232 Glycine max
Glyma.15G268500 Glycine max
Glyma.20G191000 Glycine max
Gohir.A05G071600 Gossypium hirsutum
Gohir.A05G160100 Gossypium hirsutum
Gohir.D05G074500 Gossypium hirsutum
Gohir.D05G162800 Gossypium hirsutum
Gorai.009G075600 Gossypium raimondii
Gorai.009G167800 Gossypium raimondii
GSVIVG01001358001 Vitis vinifera
GSVIVG01037252001 Vitis vinifera
HanXRQChr01g0018081 Helianthus annuus
HanXRQChr10g0319281 Helianthus annuus
HanXRQChr14g0432371 Helianthus annuus
HanXRQChr16g0520361 Helianthus annuus
Haze_02982 Corylus avellana
Haze_03285 Corylus avellana
Haze_26913 Corylus avellana
Hma1.2p1_0281F.1_g113210 Hydrangea macrophylla
Hma1.2p1_0293F.1_g116260 Hydrangea macrophylla
Hma1.2p1_0505F.1_g168140 Hydrangea macrophylla
Hma1.2p1_0872F.1_g231160 Hydrangea macrophylla
HPP92_008257 Vanilla planifolia
HPP92_022742 Vanilla planifolia
HPP92_022773 Vanilla planifolia
Lalb_Chr02g0151181 Lupinus albus
Lalb_Chr20g0108201 Lupinus albus
Lalb_Chr25g0283641 Lupinus albus
Lj3g0024225 Lotus japonicus
Lj4P151T58 Lonicera japonica
Lj5g0021026 Lotus japonicus
Lj9A621G49 Lonicera japonica
Lsat_1_v5_gn_1_87220 Lactuca sativa
Lsat_1_v5_gn_4_46541 Lactuca sativa
Lsat_1_v5_gn_5_158281 Lactuca sativa
Lsat_1_v5_gn_5_164660 Lactuca sativa
Manes.02G141000 Manihot esculenta
Manes.07G000500 Manihot esculenta
Manes.10G152000 Manihot esculenta
Mapoly0033s0111 Marchantia polymorpha
Mapoly0063s0010 Marchantia polymorpha
Mapoly0200s0007 Marchantia polymorpha
Mapoly0216s0011 Marchantia polymorpha
Mapoly0383s0001 Marchantia polymorpha
Mapoly0383s0002 Marchantia polymorpha
MBI01_g01369_MAGBIO Magnolia biondii
MBI03_g13094_MAGBIO Magnolia biondii
MBI04_g33965_MAGBIO Magnolia biondii
MCO01G768 Micromonas commoda
MD00G1055300 Malus domestica
MD00G1154100 Malus domestica
MD02G1319300 Malus domestica
MD11G1194100 Malus domestica
MD15G1397300 Malus domestica
Medtr2g061630 Medicago truncatula
Medtr4g132910 Medicago truncatula
Medtr4g132950 Medicago truncatula
Medtr8g106110 Medicago truncatula
MELO3C015133.2 Cucumis melo
MELO3C023506.2 Cucumis melo
Migut.J01395 Erythranthe guttata
Migut.N01657 Erythranthe guttata
Migut.O00475 Erythranthe guttata
MSTRG.17066 Avicennia marina
MSTRG.19666 Avicennia marina
MSTRG.4998 Avicennia marina
Nitab4.5_0000468g0060 Nicotiana tabacum
Nitab4.5_0001515g0060 Nicotiana tabacum
Nitab4.5_0001515g0100 Nicotiana tabacum
Nitab4.5_0002358g0010 Nicotiana tabacum
Nitab4.5_0023974g0010 Nicotiana tabacum
Nn2g15681 Nelumbo nucifera
Nn7g36615 Nelumbo nucifera
Oeu000987.1 Olea europaea
Oeu024896.1 Olea europaea
Oeu024931.4 Olea europaea
Oeu032787.1 Olea europaea
Os02g0194100 Oryza sativa ssp. japonica
Os11g0171400 Oryza sativa ssp. japonica
Os11g0538900 Oryza sativa ssp. japonica
Os11g0623601 Oryza sativa ssp. japonica
Peaxi162Scf00108g00034 Petunia axillaris
Peaxi162Scf00177g00919 Petunia axillaris
Peaxi162Scf00402g00612 Petunia axillaris
PGR044G1446 Punica granatum
PGR102G2312 Punica granatum
PGSC0003DMG400028982 Solanum tuberosum
PGSC0003DMG401026992 Solanum tuberosum
Phvul.005G041600 Phaseolus vulgaris
Phvul.007G141800 Phaseolus vulgaris
Potri.001G230500 Populus trichocarpa
Potri.001G277200 Populus trichocarpa
Potri.009G023900 Populus trichocarpa
Pp3c12_7330 Physcomitrium patens
Pp3c13_21410 Physcomitrium patens
Pp3c16_4000 Physcomitrium patens
Pp3c1_40030 Physcomitrium patens
Pp3c27_4860 Physcomitrium patens
PRCOL_00005650 Prasinoderma coloniale
Prupe.1G578000 Prunus persica
Prupe.2G002900 Prunus persica
Psat1g127120 Pisum sativum
Psat4g003440 Pisum sativum
PSO339G0144 Papaver somniferum
PSO339G1606 Papaver somniferum
PSO384G2681 Papaver somniferum
PSO384G3354 Papaver somniferum
PSO478G2842 Papaver somniferum
QL04p001335 Quercus lobata
QL04p001534 Quercus lobata
QL04p021544 Quercus lobata
RcHm_v2.0_Chr1g0313271 Rosa chinensis
RcHm_v2.0_Chr2g0127281 Rosa chinensis
RcHm_v2.0_Chr6g0255981 Rosa chinensis
RcHm_v2.0_Chr6g0267091 Rosa chinensis
Rhsim07G0049800 Rhododendron simsii
Rhsim13G0212600 Rhododendron simsii
Rhsim13G0218500 Rhododendron simsii
Sabra09G0014900 Salix brachista
Sabra09G0015000 Salix brachista
Sabra16G0138000 Salix brachista
Sabra16G0171300 Salix brachista
SalBow5G3889 Salvia bowleyana
Sc02g0003780 Simmondsia chinensis
Sc16g0005130 Simmondsia chinensis
Sc19g0005890 Simmondsia chinensis
Sed0002541 Sechium edule
Sed0004903 Sechium edule
Sed0005598 Sechium edule
Sed0013906 Sechium edule
SEGI_26527 Sequoiadendron giganteum
SEGI_39166 Sequoiadendron giganteum
SGA_v2.0_scaffold45G17005 Striga asiatica
SGA_v2.0_scaffold4G02232 Striga asiatica
SGA_v2.0_scaffold95G28770 Striga asiatica
SHI20594 Sapria himalayana
SHI24995 Sapria himalayana
SMO118G0428 Selaginella moellendorffii
SMO141G0167 Selaginella moellendorffii
Solyc01g073740.4 Solanum lycopersicum
Solyc06g071630.2 Solanum lycopersicum
Sopen01g033350 Solanum pennellii
Sopen06g027940 Solanum pennellii
Sp4g26410 Schrenkiella parvula
Sp5g03110 Schrenkiella parvula
Sp7g12690 Schrenkiella parvula
TAR623G1248 Trochodendron aralioides
TAR628G0523 Trochodendron aralioides
TAR628G0894 Trochodendron aralioides
TAR633G1299 Trochodendron aralioides
TAR636G2333 Trochodendron aralioides
THA.LOC104800445 Tarenaya hassleriana
THA.LOC104817150 Tarenaya hassleriana
Thecc.01G416600 Theobroma cacao
Thecc.09G250300 Theobroma cacao
Thhalv10001384m.g Eutrema salsugineum
Thhalv10005966m.g Eutrema salsugineum
Thhalv10017599m.g Eutrema salsugineum
Thhalv10027440m.g Eutrema salsugineum
TPR.G16151 Trifolium pratense
TPR.G24648 Trifolium pratense
TPR.G37056 Trifolium pratense
TPR.G8919 Trifolium pratense
TWI09G0205 Tripterygium wilfordii
TWI09G1279 Tripterygium wilfordii
TWI73G0973 Tripterygium wilfordii
unitig_0.g1368 Utricularia gibba
unitig_0.g561 Utricularia gibba
unitig_61.g26437 Utricularia gibba
vmacro05339 Vaccinium macrocarpon
vmacro13609 Vaccinium macrocarpon
vmacro14224 Vaccinium macrocarpon
VMungo0720G1521 Vigna mungo
VMungo1080G0649 Vigna mungo
VMungo1309G1064 Vigna mungo
Zm00001eb091720 Zea mays
Zm00001eb206090 Zea mays
Zm00001eb206100 Zea mays
Zm00001eb236450 Zea mays

User provided reference genes

Program Settings